| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KJ194581 |
Definition |
Mycobacterium phage Audrey, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus. |
DB of origin |
PVOG |
Length |
68662 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
67.5 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AHN83962.1 | KJ194581_p54 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 47610 | 47939 |
| AHN83934.1 | KJ194581_p26 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19363 | 19776 |
| AHN83939.1 | KJ194581_p31 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 28613 | 30838 |
| AHN83994.1 | KJ194581_p86 | hypothetical protein | phrog_7541 | unknown function | unknown function | -1 | 62184 | 62516 |
| AHN83952.1 | KJ194581_p44 | DNA-binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39024 | 39461 |
| AHN84003.1 | KJ194581_p95 | hypothetical protein | phrog_6469 | unknown function | unknown function | -1 | 64710 | 65177 |
| AHN83953.1 | KJ194581_p45 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39506 | 40228 |
| AHN83947.1 | KJ194581_p39 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 36894 | 37262 |
| AHN83943.1 | KJ194581_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 33840 | 34265 |
| AHN83965.1 | KJ194581_p57 | hypothetical protein | phrog_6342 | unknown function | unknown function | -1 | 51089 | 51862 |
| AHN83927.1 | KJ194581_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 15461 | 15940 |
| AHN83924.1 | KJ194581_p16 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 13964 | 14569 |
| AHN83916.1 | KJ194581_p8 | RuvC | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 4863 | 5414 |
| AHN83949.1 | KJ194581_p41 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 37600 | 38010 |
| AHN83923.1 | KJ194581_p15 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 13140 | 13949 |
| AHN83950.1 | KJ194581_p42 | hydrolase domain protein | phrog_2804 | virion structural protein | head and packaging | 1 | 38010 | 38735 |
| AHN83977.1 | KJ194581_p69 | hypothetical protein | phrog_6404 | unknown function | unknown function | 1 | 57530 | 57760 |
| AHN83912.1 | KJ194581_p4 | PAPS reductase | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 1069 | 2151 |
| AHN83995.1 | KJ194581_p87 | hypothetical protein | phrog_7414 | unknown function | unknown function | -1 | 62513 | 62800 |
| AHN83914.1 | KJ194581_p6 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 2714 | 4474 |
| AHN83936.1 | KJ194581_p28 | tapemeasure | phrog_934 | tail length tape measure protein | tail | 1 | 20395 | 26136 |
| AHN83920.1 | KJ194581_p12 | portal protein | phrog_859 | portal protein | head and packaging | 1 | 8208 | 10640 |
| AHN83919.1 | KJ194581_p11 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 6314 | 8218 |
| AHN83991.1 | KJ194581_p83 | hypothetical protein | phrog_6460 | unknown function | unknown function | -1 | 61513 | 61683 |
| AHN84010.1 | KJ194581_p102 | hypothetical protein | phrog_6432 | unknown function | unknown function | 1 | 68097 | 68246 |
| AHN83956.1 | KJ194581_p48 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42666 | 43211 |
| AHN83941.1 | KJ194581_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32219 | 33421 |
| AHN83978.1 | KJ194581_p70 | hypothetical protein | phrog_4938 | unknown function | unknown function | 1 | 57757 | 57921 |
| AHN83998.1 | KJ194581_p90 | hypothetical protein | phrog_5355 | unknown function | unknown function | -1 | 63288 | 63443 |
| AHN83988.1 | KJ194581_p80 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60935 | 61264 |
| AHN83970.1 | KJ194581_p62 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 54525 | 55004 |
| AHN83964.1 | KJ194581_p56 | RepA | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 48452 | 51055 |
| AHN83944.1 | KJ194581_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34276 | 34929 |
| AHN83961.1 | KJ194581_p53 | hypothetical protein | phrog_6400 | unknown function | unknown function | -1 | 47248 | 47610 |
| AHN83915.1 | KJ194581_p7 | hypothetical protein | phrog_6317 | unknown function | unknown function | -1 | 4615 | 4866 |
| AHN83999.1 | KJ194581_p91 | hypothetical protein | phrog_6199 | unknown function | unknown function | -1 | 63518 | 63901 |
| AHN83975.1 | KJ194581_p67 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 56482 | 57249 |
| AHN83985.1 | KJ194581_p77 | hypothetical protein | phrog_928 | unknown function | unknown function | 1 | 59874 | 60401 |
| AHN84011.1 | KJ194581_p103 | hypothetical protein | phrog_5930 | unknown function | unknown function | 1 | 68269 | 68613 |
| AHN84002.1 | KJ194581_p94 | hypothetical protein | phrog_6114 | unknown function | unknown function | -1 | 64534 | 64713 |
| AHN83966.1 | KJ194581_p58 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 51859 | 53676 |
| AHN83937.1 | KJ194581_p29 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 26146 | 27576 |
| AHN83974.1 | KJ194581_p66 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 55811 | 56080 |
| AHN83983.1 | KJ194581_p75 | hypothetical protein | phrog_6511 | unknown function | unknown function | 1 | 59382 | 59534 |
| AHN83989.1 | KJ194581_p81 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 61257 | 61355 |
| AHN83938.1 | KJ194581_p30 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 27573 | 28616 |
| AHN84008.1 | KJ194581_p100 | hypothetical protein | phrog_5733 | unknown function | unknown function | 1 | 67622 | 67867 |
| AHN83954.1 | KJ194581_p46 | lysin A | phrog_700 | endolysin | lysis | 1 | 40308 | 41531 |
| AHN84006.1 | KJ194581_p98 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 67023 | 67259 |
| AHN83926.1 | KJ194581_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 15003 | 15464 |
| AHN83982.1 | KJ194581_p74 | hypothetical protein | phrog_1306 | unknown function | unknown function | -1 | 59193 | 59363 |
| AHN83930.1 | KJ194581_p22 | hypothetical protein | phrog_6514 | unknown function | unknown function | -1 | 17498 | 17608 |
| AHN83948.1 | KJ194581_p40 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37259 | 37582 |
| AHN83910.1 | KJ194581_p2 | PAPS reductase | phrog_6919 | unknown function | unknown function | 1 | 690 | 854 |
| AHN83990.1 | KJ194581_p82 | hypothetical protein | phrog_6304 | unknown function | unknown function | -1 | 61352 | 61516 |
| AHN83935.1 | KJ194581_p27 | hypothetical protein | phrog_1118 | tail assembly chaperone | tail | 1 | 19776 | 20369 |
| AHN83997.1 | KJ194581_p89 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 63079 | 63291 |
| AHN83986.1 | KJ194581_p78 | hypothetical protein | phrog_4974 | unknown function | unknown function | -1 | 60414 | 60602 |
| AHN84000.1 | KJ194581_p92 | hypothetical protein | phrog_6428 | unknown function | unknown function | -1 | 63942 | 64157 |
| AHN83931.1 | KJ194581_p23 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 17739 | 18479 |
| AHN83945.1 | KJ194581_p37 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34926 | 35525 |
| AHN84004.1 | KJ194581_p96 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 65275 | 65763 |
| AHN83972.1 | KJ194581_p64 | hypothetical protein | phrog_6656 | unknown function | unknown function | -1 | 55157 | 55387 |
| AHN83921.1 | KJ194581_p13 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 10640 | 10846 |
| AHN83925.1 | KJ194581_p17 | hypothetical protein | phrog_565 | holin | lysis | 1 | 14566 | 15000 |
| AHN83984.1 | KJ194581_p76 | hypothetical protein | phrog_6229 | unknown function | unknown function | 1 | 59536 | 59892 |
| AHN83929.1 | KJ194581_p21 | major tail subunit | phrog_792 | major tail protein | tail | 1 | 16357 | 17436 |
| AHN83909.1 | KJ194581_p1 | ParB | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 693 |
| AHN83968.1 | KJ194581_p60 | hypothetical protein | phrog_6936 | unknown function | unknown function | -1 | 53948 | 54085 |
| AHN83932.1 | KJ194581_p24 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 18476 | 18997 |
| AHN83969.1 | KJ194581_p61 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 54082 | 54528 |
| AHN83918.1 | KJ194581_p10 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 5949 | 6284 |
| AHN83963.1 | KJ194581_p55 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47936 | 48409 |
| AHN83928.1 | KJ194581_p20 | DNA-binding domain protein | phrog_2525 | unknown function | unknown function | 1 | 15937 | 16269 |
| AHN83971.1 | KJ194581_p63 | hypothetical protein | phrog_6735 | unknown function | unknown function | -1 | 55001 | 55120 |
| AHN83960.1 | KJ194581_p52 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 45456 | 47153 |
| AHN83913.1 | KJ194581_p5 | ParB | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 2148 | 2717 |
| AHN83981.1 | KJ194581_p73 | hypothetical protein | phrog_4885 | unknown function | unknown function | 1 | 58930 | 59187 |
| AHN84001.1 | KJ194581_p93 | hypothetical protein | phrog_5411 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64154 | 64534 |
| AHN83980.1 | KJ194581_p72 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 58522 | 58926 |
| AHN83979.1 | KJ194581_p71 | HTH domain protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 57918 | 58517 |
| AHN84007.1 | KJ194581_p99 | hypothetical protein | phrog_4825 | unknown function | unknown function | 1 | 67437 | 67610 |
| AHN83917.1 | KJ194581_p9 | hypothetical protein | phrog_6276 | unknown function | unknown function | -1 | 5548 | 5844 |
| AHN83942.1 | KJ194581_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33448 | 33831 |
| AHN83922.1 | KJ194581_p14 | capsid protein | phrog_777 | major head protein | head and packaging | 1 | 11026 | 13041 |
| AHN83946.1 | KJ194581_p38 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 35522 | 36871 |
| AHN83992.1 | KJ194581_p84 | hypothetical protein | phrog_6338 | unknown function | unknown function | -1 | 61680 | 61838 |
| AHN83940.1 | KJ194581_p32 | minor tail protein | phrog_356 | minor tail protein | tail | 1 | 30840 | 32222 |
| AHN84009.1 | KJ194581_p101 | hypothetical protein | phrog_6097 | unknown function | unknown function | 1 | 67864 | 68100 |
| AHN83958.1 | KJ194581_p50 | hypothetical protein | phrog_7519 | unknown function | unknown function | -1 | 44873 | 45094 |
| AHN83987.1 | KJ194581_p79 | hypothetical protein | phrog_6691 | unknown function | unknown function | -1 | 60657 | 60938 |
| AHN83933.1 | KJ194581_p25 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 19008 | 19379 |
| AHN83973.1 | KJ194581_p65 | hypothetical protein | phrog_6105 | unknown function | unknown function | -1 | 55384 | 55734 |
| AHN83951.1 | KJ194581_p43 | DNA-binding domain protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38791 | 39027 |
| AHN83976.1 | KJ194581_p68 | ParD DNA binding protein | phrog_1016 | unknown function | unknown function | 1 | 57246 | 57533 |
| AHN83967.1 | KJ194581_p59 | hypothetical protein | phrog_6482 | unknown function | unknown function | -1 | 53676 | 53951 |
| AHN83955.1 | KJ194581_p47 | lysin B | phrog_102 | endolysin | lysis | 1 | 41532 | 42596 |
| AHN83959.1 | KJ194581_p51 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 45141 | 45410 |
| AHN83993.1 | KJ194581_p85 | hypothetical protein | phrog_4392 | unknown function | unknown function | -1 | 61831 | 62187 |
| AHN83911.1 | KJ194581_p3 | hypothetical protein | phrog_6307 | unknown function | unknown function | 1 | 851 | 1072 |
| AHN83996.1 | KJ194581_p88 | hypothetical protein | phrog_7490 | unknown function | unknown function | -1 | 62797 | 62985 |
| AHN84005.1 | KJ194581_p97 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 65837 | 66949 |
| AHN83957.1 | KJ194581_p49 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43260 | 44882 |