| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KJ417497 |
Definition |
Streptococcus phage Spn1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
41323 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
39.93 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AHN84617.1 | KJ417497_p30 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 15306 | 15461 |
| AHN84626.1 | KJ417497_p39 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 19311 | 20609 |
| AHN84603.1 | KJ417497_p16 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 6808 | 7023 |
| AHN84650.1 | KJ417497_p63 | cell wall-associated murein hydrolase | phrog_1110 | endolysin | lysis | 1 | 40149 | 41105 |
| AHN84588.1 | KJ417497_p1 | site-specific recombinase | phrog_1 | integrase | integration and excision | -1 | 103 | 1230 |
| AHN84593.1 | KJ417497_p6 | hypothetical protein | phrog_4679 | unknown function | unknown function | 1 | 4389 | 4523 |
| AHN84611.1 | KJ417497_p24 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9792 | 10985 |
| AHN84632.1 | KJ417497_p45 | major capsid protein | phrog_544 | major head protein | head and packaging | 1 | 24739 | 25584 |
| AHN84648.1 | KJ417497_p61 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 39510 | 39809 |
| AHN84599.1 | KJ417497_p12 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 5867 | 6022 |
| AHN84621.1 | KJ417497_p34 | hypothetical protein | phrog_9057 | unknown function | unknown function | 1 | 16571 | 17029 |
| AHN84610.1 | KJ417497_p23 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 9344 | 9829 |
| AHN84635.1 | KJ417497_p48 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 25958 | 26269 |
| AHN84609.1 | KJ417497_p22 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 8985 | 9344 |
| AHN84637.1 | KJ417497_p50 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26563 | 27078 |
| AHN84645.1 | KJ417497_p58 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 34199 | 38851 |
| AHN84589.1 | KJ417497_p2 | abortive infection bacteriophage resistance protein | phrog_2158 | abortive infection resistance protein | moron, auxiliary metabolic gene and host takeover | -1 | 1509 | 2459 |
| AHN84636.1 | KJ417497_p49 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 26286 | 26588 |
| AHN84623.1 | KJ417497_p36 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 17576 | 17947 |
| AHN84622.1 | KJ417497_p35 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 17142 | 17579 |
| AHN84607.1 | KJ417497_p20 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7788 | 8510 |
| AHN84649.1 | KJ417497_p62 | holin | phrog_608 | holin | lysis | 1 | 39813 | 40145 |
| AHN84630.1 | KJ417497_p43 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 23766 | 23978 |
| AHN84615.1 | KJ417497_p28 | replication protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 12846 | 13667 |
| AHN84602.1 | KJ417497_p15 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 6539 | 6811 |
| AHN84596.1 | KJ417497_p9 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 4970 | 5170 |
| AHN84595.1 | KJ417497_p8 | phage transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4722 | 4934 |
| AHN84613.1 | KJ417497_p26 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 11320 | 12147 |
| AHN84590.1 | KJ417497_p3 | CI-like repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2608 | 3399 |
| AHN84638.1 | KJ417497_p51 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 27075 | 27443 |
| AHN84597.1 | KJ417497_p10 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 5409 | 5612 |
| AHN84647.1 | KJ417497_p60 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 39151 | 39501 |
| AHN84625.1 | KJ417497_p38 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 18854 | 19333 |
| AHN84600.1 | KJ417497_p13 | hypothetical protein | phrog_1534 | unknown function | unknown function | 1 | 6019 | 6189 |
| AHN84627.1 | KJ417497_p40 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 20621 | 22090 |
| AHN84618.1 | KJ417497_p31 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 15458 | 16153 |
| AHN84591.1 | KJ417497_p4 | hypothetical protein | phrog_4488 | unknown function | unknown function | 1 | 3561 | 3692 |
| AHN84624.1 | KJ417497_p37 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 18020 | 18424 |
| AHN84620.1 | KJ417497_p33 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 16311 | 16571 |
| AHN84601.1 | KJ417497_p14 | hypothetical protein | phrog_3240 | unknown function | unknown function | -1 | 6182 | 6421 |
| AHN84598.1 | KJ417497_p11 | hypothetical protein | phrog_7728 | unknown function | unknown function | -1 | 5569 | 5760 |
| AHN84614.1 | KJ417497_p27 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12167 | 12673 |
| AHN84628.1 | KJ417497_p41 | capsid and scaffold protein | phrog_115 | minor head protein | head and packaging | 1 | 22053 | 23402 |
| AHN84629.1 | KJ417497_p42 | isoleucyl-tRNA synthetase | phrog_15041 | unknown function | unknown function | 1 | 23390 | 23617 |
| AHN84639.1 | KJ417497_p52 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27446 | 27859 |
| AHN84604.1 | KJ417497_p17 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 7002 | 7190 |
| AHN84644.1 | KJ417497_p57 | hyaluronidase | phrog_9680 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 32637 | 34193 |
| AHN84641.1 | KJ417497_p54 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28283 | 28633 |
| AHN84605.1 | KJ417497_p18 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 7202 | 7543 |
| AHN84640.1 | KJ417497_p53 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27864 | 28244 |
| AHN84633.1 | KJ417497_p46 | hypothetical protein | phrog_2250 | unknown function | unknown function | 1 | 25596 | 25778 |
| AHN84608.1 | KJ417497_p21 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 8503 | 8985 |
| AHN84631.1 | KJ417497_p44 | capsid and scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 24148 | 24732 |
| AHN84642.1 | KJ417497_p55 | tail length tape-measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28620 | 32273 |
| AHN84594.1 | KJ417497_p7 | hypothetical protein | phrog_6248 | unknown function | unknown function | 1 | 4539 | 4703 |
| AHN84592.1 | KJ417497_p5 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3643 | 4332 |
| AHN84616.1 | KJ417497_p29 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 13670 | 15013 |
| AHN84634.1 | KJ417497_p47 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25768 | 25956 |
| AHN84619.1 | KJ417497_p32 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 16153 | 16314 |
| AHN84606.1 | KJ417497_p19 | DNA-directed RNA polymerase beta' subunit | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 7544 | 7774 |
| AHN84612.1 | KJ417497_p25 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 11003 | 11320 |
| AHN84646.1 | KJ417497_p59 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38945 | 39148 |
| AHN84643.1 | KJ417497_p56 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32282 | 32632 |