Genomic map of Vibrio phage Vc1 (KJ502657)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ502657
Definition
Vibrio phage Vc1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Colwellvirinae; Gutovirus; Vibrio virus Vc1.
DB of origin
PVOG
Length
44541
Host Name
Vibrio sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
44.15
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AHN84671.1 KJ502657_p20 hypothetical protein phrog_21064 unknown function unknown function 1 23936 24199
AHN84668.1 KJ502657_p17 hypothetical protein phrog_2725 acetyl-CoA acetyltransferase other 1 21059 21340
AHN84659.1 KJ502657_p8 tail tubular protein A phrog_446 tail protein tail 1 5609 6256
AHN84665.1 KJ502657_p14 hypothetical protein phrog_920 holin lysis 1 18451 18633
AHN84677.1 KJ502657_p26 hypothetical protein phrog_4571 unknown function unknown function 1 27409 28278
AHN84662.1 KJ502657_p11 hypothetical protein phrog_4290 lysozyme domain-containing protein lysis 1 9481 11598
AHN84663.1 KJ502657_p12 internal virion-like protein phrog_342 internal virion protein with endolysin domain head and packaging 1 11607 15293
AHN84657.1 KJ502657_p6 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 3324 4229
AHN84667.1 KJ502657_p16 large terminase subunit phrog_38 terminase large subunit head and packaging 1 18976 20856
AHN84660.1 KJ502657_p9 tail tubular protein B protein phrog_457 tail protein tail 1 6265 8865
AHN84661.1 KJ502657_p10 hypothetical protein phrog_805 internal virion protein head and packaging 1 8866 9480
AHN84664.1 KJ502657_p13 tail fiber protein singleton unknown function unknown function 1 15350 18442
AHN84672.1 KJ502657_p21 cell wall hydrolase phrog_938 endolysin lysis 1 24250 24543
AHN84678.1 KJ502657_p27 hypothetical protein phrog_36438 unknown function unknown function 1 28399 28596
AHN84691.1 KJ502657_p40 5'-3'exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 40607 41815
AHN84682.1 KJ502657_p31 hypothetical protein phrog_16218 unknown function unknown function 1 34148 34615
AHN84681.1 KJ502657_p30 DNA helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 31990 34104
AHN84688.1 KJ502657_p37 hypothetical protein phrog_6006 unknown function unknown function 1 39714 39890
AHN84684.1 KJ502657_p33 hypothetical protein phrog_20865 unknown function unknown function 1 35059 35661
AHN84670.1 KJ502657_p19 hypothetical protein phrog_21471 unknown function unknown function 1 22170 23918
AHN84676.1 KJ502657_p25 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 26707 27114
AHN84686.1 KJ502657_p35 hypothetical protein singleton unknown function unknown function 1 38312 38575
AHN84654.1 KJ502657_p3 acetyltransferase phrog_1249 acetyltransferase other 1 1050 1502
AHN84653.1 KJ502657_p2 hypothetical protein singleton unknown function unknown function 1 886 1053
AHN84679.1 KJ502657_p28 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 28597 31341
AHN84693.1 KJ502657_p42 phosphatase 2a-like protein phrog_221 metallo-phosphoesterase other 1 42234 43244
AHN84652.1 KJ502657_p1 hypothetical protein phrog_14692 unknown function unknown function 1 627 809
AHN84673.1 KJ502657_p22 hypothetical protein phrog_20492 unknown function unknown function 1 24540 24686
AHN84680.1 KJ502657_p29 hypothetical protein phrog_20635 unknown function unknown function 1 31561 31704
AHN84658.1 KJ502657_p7 major capsid protein phrog_267 major head protein head and packaging 1 4278 5549
AHN84694.1 KJ502657_p43 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 43286 43642
AHN84669.1 KJ502657_p18 hypothetical protein phrog_2725 acetyl-CoA acetyltransferase other 1 21351 22046
AHN84675.1 KJ502657_p24 hypothetical protein singleton unknown function unknown function 1 25919 26101
AHN84685.1 KJ502657_p34 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 35698 38211
AHN84689.1 KJ502657_p38 hypothetical protein phrog_8057 unknown function unknown function 1 39892 40113
AHN84687.1 KJ502657_p36 hypothetical protein phrog_862 unknown function unknown function 1 38938 39711
AHN84690.1 KJ502657_p39 hypothetical protein phrog_4429 unknown function unknown function 1 40181 40546
AHN84666.1 KJ502657_p15 small terminase subunit-like protein phrog_891 terminase small subunit head and packaging 1 18635 18976
AHN84692.1 KJ502657_p41 endonuclease phrog_11865 endonuclease VII DNA, RNA and nucleotide metabolism 1 41937 42233
AHN84656.1 KJ502657_p5 head-tail connector phrog_449 head-tail adaptor connector 1 1690 3315
AHN84655.1 KJ502657_p4 hypothetical protein phrog_9033 unknown function unknown function 1 1504 1680
AHN84674.1 KJ502657_p23 hypothetical protein singleton unknown function unknown function 1 24896 25123
AHN84683.1 KJ502657_p32 hypothetical protein phrog_15101 unknown function unknown function 1 34617 34985
AHN84695.1 KJ502657_p44 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 43639 44196