| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KJ502657 |
Definition |
Vibrio phage Vc1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Colwellvirinae; Gutovirus; Vibrio virus Vc1. |
DB of origin |
PVOG |
Length |
44541 |
Host Name |
Vibrio sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
44.15 |
Number of singletons |
5 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AHN84671.1 | KJ502657_p20 | hypothetical protein | phrog_21064 | unknown function | unknown function | 1 | 23936 | 24199 |
| AHN84668.1 | KJ502657_p17 | hypothetical protein | phrog_2725 | acetyl-CoA acetyltransferase | other | 1 | 21059 | 21340 |
| AHN84659.1 | KJ502657_p8 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 5609 | 6256 |
| AHN84665.1 | KJ502657_p14 | hypothetical protein | phrog_920 | holin | lysis | 1 | 18451 | 18633 |
| AHN84677.1 | KJ502657_p26 | hypothetical protein | phrog_4571 | unknown function | unknown function | 1 | 27409 | 28278 |
| AHN84662.1 | KJ502657_p11 | hypothetical protein | phrog_4290 | lysozyme domain-containing protein | lysis | 1 | 9481 | 11598 |
| AHN84663.1 | KJ502657_p12 | internal virion-like protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 11607 | 15293 |
| AHN84657.1 | KJ502657_p6 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 3324 | 4229 |
| AHN84667.1 | KJ502657_p16 | large terminase subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 18976 | 20856 |
| AHN84660.1 | KJ502657_p9 | tail tubular protein B protein | phrog_457 | tail protein | tail | 1 | 6265 | 8865 |
| AHN84661.1 | KJ502657_p10 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 8866 | 9480 |
| AHN84664.1 | KJ502657_p13 | tail fiber protein | singleton | unknown function | unknown function | 1 | 15350 | 18442 |
| AHN84672.1 | KJ502657_p21 | cell wall hydrolase | phrog_938 | endolysin | lysis | 1 | 24250 | 24543 |
| AHN84678.1 | KJ502657_p27 | hypothetical protein | phrog_36438 | unknown function | unknown function | 1 | 28399 | 28596 |
| AHN84691.1 | KJ502657_p40 | 5'-3'exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40607 | 41815 |
| AHN84682.1 | KJ502657_p31 | hypothetical protein | phrog_16218 | unknown function | unknown function | 1 | 34148 | 34615 |
| AHN84681.1 | KJ502657_p30 | DNA helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 31990 | 34104 |
| AHN84688.1 | KJ502657_p37 | hypothetical protein | phrog_6006 | unknown function | unknown function | 1 | 39714 | 39890 |
| AHN84684.1 | KJ502657_p33 | hypothetical protein | phrog_20865 | unknown function | unknown function | 1 | 35059 | 35661 |
| AHN84670.1 | KJ502657_p19 | hypothetical protein | phrog_21471 | unknown function | unknown function | 1 | 22170 | 23918 |
| AHN84676.1 | KJ502657_p25 | S-adenosyl-L-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 26707 | 27114 |
| AHN84686.1 | KJ502657_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38312 | 38575 |
| AHN84654.1 | KJ502657_p3 | acetyltransferase | phrog_1249 | acetyltransferase | other | 1 | 1050 | 1502 |
| AHN84653.1 | KJ502657_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 886 | 1053 |
| AHN84679.1 | KJ502657_p28 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 28597 | 31341 |
| AHN84693.1 | KJ502657_p42 | phosphatase 2a-like protein | phrog_221 | metallo-phosphoesterase | other | 1 | 42234 | 43244 |
| AHN84652.1 | KJ502657_p1 | hypothetical protein | phrog_14692 | unknown function | unknown function | 1 | 627 | 809 |
| AHN84673.1 | KJ502657_p22 | hypothetical protein | phrog_20492 | unknown function | unknown function | 1 | 24540 | 24686 |
| AHN84680.1 | KJ502657_p29 | hypothetical protein | phrog_20635 | unknown function | unknown function | 1 | 31561 | 31704 |
| AHN84658.1 | KJ502657_p7 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 4278 | 5549 |
| AHN84694.1 | KJ502657_p43 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 43286 | 43642 |
| AHN84669.1 | KJ502657_p18 | hypothetical protein | phrog_2725 | acetyl-CoA acetyltransferase | other | 1 | 21351 | 22046 |
| AHN84675.1 | KJ502657_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25919 | 26101 |
| AHN84685.1 | KJ502657_p34 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 35698 | 38211 |
| AHN84689.1 | KJ502657_p38 | hypothetical protein | phrog_8057 | unknown function | unknown function | 1 | 39892 | 40113 |
| AHN84687.1 | KJ502657_p36 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 38938 | 39711 |
| AHN84690.1 | KJ502657_p39 | hypothetical protein | phrog_4429 | unknown function | unknown function | 1 | 40181 | 40546 |
| AHN84666.1 | KJ502657_p15 | small terminase subunit-like protein | phrog_891 | terminase small subunit | head and packaging | 1 | 18635 | 18976 |
| AHN84692.1 | KJ502657_p41 | endonuclease | phrog_11865 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 41937 | 42233 |
| AHN84656.1 | KJ502657_p5 | head-tail connector | phrog_449 | head-tail adaptor | connector | 1 | 1690 | 3315 |
| AHN84655.1 | KJ502657_p4 | hypothetical protein | phrog_9033 | unknown function | unknown function | 1 | 1504 | 1680 |
| AHN84674.1 | KJ502657_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24896 | 25123 |
| AHN84683.1 | KJ502657_p32 | hypothetical protein | phrog_15101 | unknown function | unknown function | 1 | 34617 | 34985 |
| AHN84695.1 | KJ502657_p44 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 43639 | 44196 |