Genomic map of Mycobacterium phage Emerson (KJ567045)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ567045
Definition
Mycobacterium phage Emerson, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
PVOG
Length
60310
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
66.59
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AID59175.1 KJ567045_p75 peptidase phrog_908 unknown function unknown function 1 49203 50309
AID59179.1 KJ567045_p79 hypothetical protein phrog_2974 unknown function unknown function 1 51474 51749
AID59162.1 KJ567045_p62 hypothetical protein phrog_3492 unknown function unknown function 1 42152 42385
AID59101.1 KJ567045_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
AID59131.1 KJ567045_p31 holin phrog_565 holin lysis 1 27337 27777
AID59110.1 KJ567045_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7094 7279
AID59167.1 KJ567045_p67 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43939 44181
AID59169.1 KJ567045_p69 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44414 44785
AID59102.1 KJ567045_p2 hypothetical protein phrog_5284 unknown function unknown function 1 297 479
AID59106.1 KJ567045_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1382 1609
AID59134.1 KJ567045_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28353 29561
AID59187.1 KJ567045_p87 hypothetical protein phrog_3167 unknown function unknown function 1 55322 55720
AID59116.1 KJ567045_p16 hypothetical protein phrog_123 tail terminator connector 1 9979 10404
AID59122.1 KJ567045_p22 minor tail protein phrog_110 minor tail protein tail 1 17148 18914
AID59196.1 KJ567045_p96 hypothetical protein phrog_4560 unknown function unknown function 1 58900 59169
AID59161.1 KJ567045_p61 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41277 42155
AID59180.1 KJ567045_p80 hypothetical protein phrog_5776 unknown function unknown function 1 51846 51974
AID59117.1 KJ567045_p17 major tail subunit phrog_117 major tail protein tail 1 10504 11115
AID59159.1 KJ567045_p59 hypothetical protein phrog_2870 unknown function unknown function 1 40835 41119
AID59130.1 KJ567045_p30 lysin B phrog_102 endolysin lysis 1 26454 27326
AID59124.1 KJ567045_p24 minor tail protein phrog_1565 minor tail protein tail 1 19474 20556
AID59173.1 KJ567045_p73 hypothetical protein phrog_3478 unknown function unknown function 1 48545 49006
AID59139.1 KJ567045_p39 hypothetical protein phrog_7081 unknown function unknown function 1 31338 31736
AID59143.1 KJ567045_p43 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 34592 34972
AID59142.1 KJ567045_p42 hypothetical protein phrog_950 unknown function unknown function -1 33663 34457
AID59141.1 KJ567045_p41 intergrase phrog_1 integrase integration and excision 1 32470 33558
AID59153.1 KJ567045_p53 hypothetical protein phrog_301 secreted protein other 1 38765 39115
AID59125.1 KJ567045_p25 minor tail protein phrog_1736 minor tail protein tail 1 20563 20871
AID59136.1 KJ567045_p36 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29754 30185
AID59157.1 KJ567045_p57 DnaQ phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39982 40536
AID59155.1 KJ567045_p55 hypothetical protein phrog_1956 unknown function unknown function 1 39496 39774
AID59182.1 KJ567045_p82 hypothetical protein phrog_3868 unknown function unknown function 1 52849 53325
AID59151.1 KJ567045_p51 hypothetical protein phrog_2781 unknown function unknown function 1 37607 38551
AID59149.1 KJ567045_p49 WhiB phrog_2286 unknown function unknown function 1 36559 37350
AID59133.1 KJ567045_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28115 28366
AID59138.1 KJ567045_p38 hypothetical protein phrog_2433 unknown function unknown function 1 30536 31222
AID59190.1 KJ567045_p90 hypothetical protein phrog_980 unknown function unknown function 1 56890 57219
AID59194.1 KJ567045_p94 hypothetical protein phrog_5243 unknown function unknown function 1 58198 58416
AID59107.1 KJ567045_p7 terminase phrog_2 terminase large subunit head and packaging 1 1593 3017
AID59156.1 KJ567045_p56 hypothetical protein phrog_4832 unknown function unknown function 1 39771 39971
AID59128.1 KJ567045_p28 hypothetical protein phrog_240 head protein head and packaging 1 24413 24784
AID59195.1 KJ567045_p95 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58537 58752
AID59172.1 KJ567045_p72 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47854 48552
AID59193.1 KJ567045_p93 hypothetical protein phrog_5812 unknown function unknown function 1 57555 58184
AID59114.1 KJ567045_p14 hypothetical protein phrog_763 head-tail adaptor connector 1 9364 9720
AID59119.1 KJ567045_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11229 11666
AID59147.1 KJ567045_p47 hypothetical protein phrog_2654 unknown function unknown function 1 36186 36353
AID59185.1 KJ567045_p85 hypothetical protein phrog_6426 unknown function unknown function 1 53872 54024
AID59177.1 KJ567045_p77 hypothetical protein phrog_1338 unknown function unknown function 1 50552 50824
AID59105.1 KJ567045_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1186 1389
AID59127.1 KJ567045_p27 minor tail protein phrog_416 minor tail protein tail 1 23316 24329
AID59132.1 KJ567045_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27774 28118
AID59109.1 KJ567045_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4587 7097
AID59129.1 KJ567045_p29 lysin A phrog_1519 endolysin lysis 1 24802 26457
AID59192.1 KJ567045_p92 hypothetical protein phrog_33361 unknown function unknown function 1 57429 57554
AID59183.1 KJ567045_p83 hypothetical protein phrog_5135 unknown function unknown function 1 53319 53684
AID59120.1 KJ567045_p20 tapemeasure phrog_971 endolysin lysis 1 12076 15909
AID59199.1 KJ567045_p99 hypothetical protein phrog_5633 unknown function unknown function 1 59818 59952
AID59178.1 KJ567045_p78 SprT phrog_1006 unknown function unknown function 1 50897 51358
AID59146.1 KJ567045_p46 hypothetical protein phrog_2908 unknown function unknown function 1 35657 36007
AID59115.1 KJ567045_p15 hypothetical protein phrog_387 neck protein connector 1 9701 9982
AID59121.1 KJ567045_p21 minor tail protein phrog_106 minor tail protein tail 1 16011 17147
AID59184.1 KJ567045_p84 hypothetical protein phrog_666 unknown function unknown function 1 53678 53875
AID59191.1 KJ567045_p91 hypothetical protein phrog_3665 unknown function unknown function 1 57216 57383
AID59126.1 KJ567045_p26 minor tail protein phrog_346 minor tail protein tail 1 20872 23304
AID59104.1 KJ567045_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 960
AID59160.1 KJ567045_p60 hypothetical protein phrog_1498 unknown function unknown function 1 41122 41280
AID59189.1 KJ567045_p89 hypothetical protein phrog_2493 unknown function unknown function 1 56324 56893
AID59123.1 KJ567045_p23 minor tail protein phrog_1697 minor tail protein tail 1 18914 19390
AID59197.1 KJ567045_p97 hypothetical protein phrog_13379 unknown function unknown function 1 59206 59562
AID59154.1 KJ567045_p54 hypothetical protein phrog_3186 unknown function unknown function 1 39112 39495
AID59166.1 KJ567045_p66 hypothetical protein phrog_1911 unknown function unknown function 1 43328 43837
AID59174.1 KJ567045_p74 hypothetical protein phrog_6689 unknown function unknown function 1 49003 49206
AID59144.1 KJ567045_p44 Cro phrog_1702 transcriptional repressor transcription regulation 1 35135 35392
AID59148.1 KJ567045_p48 hypothetical protein phrog_3903 unknown function unknown function 1 36350 36562
AID59165.1 KJ567045_p65 hypothetical protein phrog_2388 unknown function unknown function 1 43124 43246
AID59181.1 KJ567045_p81 hypothetical protein phrog_2342 unknown function unknown function 1 51971 52852
AID59164.1 KJ567045_p64 hypothetical protein phrog_1581 unknown function unknown function 1 42909 43127
AID59163.1 KJ567045_p63 hypothetical protein phrog_9435 unknown function unknown function 1 42439 42912
AID59111.1 KJ567045_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7316 7858
AID59145.1 KJ567045_p45 excise phrog_1840 excisionase integration and excision 1 35389 35655
AID59188.1 KJ567045_p88 hypothetical protein phrog_2822 unknown function unknown function 1 55720 56331
AID59135.1 KJ567045_p35 hypothetical protein singleton unknown function unknown function 1 29683 29757
AID59113.1 KJ567045_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8981 9367
AID59168.1 KJ567045_p68 hypothetical protein phrog_3641 unknown function unknown function 1 44178 44417
AID59150.1 KJ567045_p50 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 37347 37610
AID59152.1 KJ567045_p52 hypothetical protein phrog_542 unknown function unknown function 1 38563 38733
AID59171.1 KJ567045_p71 hypothetical protein phrog_7662 unknown function unknown function 1 47445 47801
AID59170.1 KJ567045_p70 primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44827 47445
AID59118.1 KJ567045_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11229 12076
AID59200.1 KJ567045_p100 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59949 60251
AID59158.1 KJ567045_p58 hypothetical protein phrog_2596 unknown function unknown function 1 40536 40802
AID59103.1 KJ567045_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
AID59186.1 KJ567045_p86 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54135 55322
AID59176.1 KJ567045_p76 hypothetical protein phrog_4269 unknown function unknown function 1 50322 50555
AID59198.1 KJ567045_p98 hypothetical protein phrog_4561 unknown function unknown function 1 59543 59773
AID59140.1 KJ567045_p40 hypothetical protein phrog_658 unknown function unknown function -1 31810 32112
AID59137.1 KJ567045_p37 hypothetical protein phrog_4112 unknown function unknown function 1 30170 30460
AID59112.1 KJ567045_p12 major capsid protein phrog_10 major head protein head and packaging 1 7934 8869
AID59108.1 KJ567045_p8 portal phrog_104 portal protein head and packaging 1 3029 4582