Genomic map of Listeria phage LMTA-94 (KJ586795)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ586795
Definition
Listeria phage LMTA-94, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMSP25.
DB of origin
PVOG
Length
136468
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
189
%GC
35.84
Number of singletons
7
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AID17113.1 KJ586795_p25 hypothetical protein phrog_10641 unknown function unknown function -1 12937 13518
AID17251.1 KJ586795_p163 hypothetical protein phrog_15755 unknown function unknown function -1 125342 125746
AID17136.1 KJ586795_p48 hypothetical protein phrog_1069 unknown function unknown function -1 29300 29776
AID17108.1 KJ586795_p20 transposase domain containing protein phrog_9186 unknown function unknown function -1 9389 10426
AID17093.1 KJ586795_p5 hypothetical protein phrog_13948 unknown function unknown function -1 1228 1455
AID17109.1 KJ586795_p21 hypothetical protein phrog_1104 virion structural protein head and packaging -1 10541 11008
AID17223.1 KJ586795_p135 hypothetical protein singleton unknown function unknown function 1 111614 111793
AID17271.1 KJ586795_p183 hypothetical protein phrog_10501 unknown function unknown function -1 133766 134044
AID17156.1 KJ586795_p68 hypothetical protein phrog_10262 unknown function unknown function -1 46184 46408
AID17265.1 KJ586795_p177 hypothetical protein phrog_9612 unknown function unknown function -1 131268 131540
AID17122.1 KJ586795_p34 hypothetical protein phrog_1113 unknown function unknown function -1 18303 19187
AID17123.1 KJ586795_p35 hypothetical protein phrog_2356 unknown function unknown function -1 19247 19729
AID17142.1 KJ586795_p54 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 36719 38503
AID17163.1 KJ586795_p75 winged helix-turn-helix domain containing protein phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 53296 54936
AID17261.1 KJ586795_p173 hypothetical protein phrog_7175 unknown function unknown function -1 129813 130034
AID17169.1 KJ586795_p81 hypothetical protein phrog_877 unknown function unknown function -1 58935 62339
AID17220.1 KJ586795_p132 hypothetical protein phrog_9717 unknown function unknown function 1 110651 110920
AID17118.1 KJ586795_p30 hypothetical protein singleton unknown function unknown function -1 16281 16517
AID17243.1 KJ586795_p155 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 121404 122177
AID17217.1 KJ586795_p129 hypothetical protein phrog_990 metal-dependent phosphohydrolase other 1 108660 109091
AID17225.1 KJ586795_p137 RNA ligase phrog_548 RNA ligase DNA, RNA and nucleotide metabolism 1 112164 113105
AID17172.1 KJ586795_p84 baseplate assembly protein phrog_6 baseplate wedge subunit tail -1 67010 68056
AID17121.1 KJ586795_p33 hypothetical protein phrog_9749 unknown function unknown function -1 17776 18210
AID17089.1 KJ586795_p1 hypothetical protein phrog_11464 unknown function unknown function -1 10 153
AID17160.1 KJ586795_p72 exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 48770 50653
AID17245.1 KJ586795_p157 hypothetical protein phrog_10101 unknown function unknown function -1 122586 122948
AID17120.1 KJ586795_p32 hypothetical protein phrog_6360 unknown function unknown function -1 17327 17770
AID17176.1 KJ586795_p88 glycerophosphoryl diester phosphodiesterase phrog_7994 glycerophosphoryl diester phosphodiesterase other -1 70056 71588
AID17181.1 KJ586795_p93 hypothetical protein phrog_1038 tail assembly chaperone tail -1 78483 78926
AID17210.1 KJ586795_p122 hypothetical protein phrog_1048 unknown function unknown function 1 101713 101988
AID17276.1 KJ586795_p188 hypothetical protein phrog_4264 unknown function unknown function -1 135539 135880
AID17263.1 KJ586795_p175 YopX-like protein phrog_98 unknown function unknown function -1 130257 130661
AID17254.1 KJ586795_p166 hypothetical protein phrog_6964 unknown function unknown function -1 126539 126829
AID17104.1 KJ586795_p16 hypothetical protein phrog_10429 unknown function unknown function -1 7160 7450
AID17219.1 KJ586795_p131 tRNA-splicing ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 109393 110604
AID17133.1 KJ586795_p45 hypothetical protein phrog_1089 unknown function unknown function -1 26244 26621
AID17253.1 KJ586795_p165 hypothetical protein phrog_923 unknown function unknown function -1 125949 126542
AID17111.1 KJ586795_p23 hypothetical protein phrog_9358 unknown function unknown function -1 12037 12369
AID17212.1 KJ586795_p124 hypothetical protein phrog_9386 unknown function unknown function 1 104136 104543
AID17186.1 KJ586795_p98 hypothetical protein phrog_1127 unknown function unknown function -1 82432 82989
AID17151.1 KJ586795_p63 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 41243 42274
AID17259.1 KJ586795_p171 hypothetical protein phrog_12028 unknown function unknown function -1 129316 129573
AID17277.1 KJ586795_p189 hypothetical protein phrog_25626 unknown function unknown function -1 135882 136274
AID17206.1 KJ586795_p118 hypothetical protein phrog_1481 unknown function unknown function 1 98908 99141
AID17231.1 KJ586795_p143 DUF4379 containing protein phrog_9902 unknown function unknown function 1 115351 115983
AID17125.1 KJ586795_p37 hypothetical protein phrog_1080 unknown function unknown function -1 20750 21295
AID17138.1 KJ586795_p50 DNA-binding protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 32976 33290
AID17095.1 KJ586795_p7 hypothetical protein phrog_11937 unknown function unknown function -1 2277 2729
AID17208.1 KJ586795_p120 hypothetical protein phrog_1215 unknown function unknown function 1 99557 99793
AID17209.1 KJ586795_p121 hypothetical protein phrog_9075 unknown function unknown function 1 101164 101589
AID17218.1 KJ586795_p130 hypothetical protein phrog_9650 unknown function unknown function 1 109084 109287
AID17256.1 KJ586795_p168 hypothetical protein phrog_7738 unknown function unknown function -1 127651 128076
AID17234.1 KJ586795_p146 hypothetical protein phrog_10246 unknown function unknown function 1 116966 118219
AID17232.1 KJ586795_p144 hypothetical protein phrog_10442 unknown function unknown function 1 115989 116477
AID17211.1 KJ586795_p123 hypothetical protein phrog_9389 unknown function unknown function 1 103913 104110
AID17264.1 KJ586795_p176 hypothetical protein phrog_9360 unknown function unknown function -1 130964 131092
AID17140.1 KJ586795_p52 PcfJ domain containing protein phrog_9253 unknown function unknown function -1 34165 36003
AID17127.1 KJ586795_p39 metallophosphoesterase phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 21707 22978
AID17258.1 KJ586795_p170 hypothetical protein phrog_13577 unknown function unknown function -1 128832 129323
AID17097.1 KJ586795_p9 hypothetical protein phrog_10046 unknown function unknown function -1 3164 3427
AID17178.1 KJ586795_p90 tail lysin singleton unknown function unknown function -1 72433 73992
AID17267.1 KJ586795_p179 hypothetical protein phrog_9527 unknown function unknown function -1 131994 132206
AID17182.1 KJ586795_p94 hypothetical protein phrog_985 virion structural protein head and packaging -1 79078 79500
AID17126.1 KJ586795_p38 hypothetical protein phrog_7143 unknown function unknown function -1 21303 21686
AID17228.1 KJ586795_p140 hypothetical protein phrog_9695 unknown function unknown function 1 113937 114155
AID17146.1 KJ586795_p58 thioredoxin phrog_9691 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39774 40073
AID17262.1 KJ586795_p174 hypothetical protein phrog_9107 unknown function unknown function -1 130036 130254
AID17159.1 KJ586795_p71 hypothetical protein phrog_1070 anti-sigma factor moron, auxiliary metabolic gene and host takeover -1 48160 48750
AID17134.1 KJ586795_p46 recombinase phrog_97 UvsX-like recombinase other -1 26683 27927
AID17091.1 KJ586795_p3 hypothetical protein phrog_19585 unknown function unknown function -1 667 942
AID17198.1 KJ586795_p110 hypothetical protein phrog_1991 unknown function unknown function -1 93038 93418
AID17187.1 KJ586795_p99 hypothetical protein phrog_1004 virion structural protein head and packaging -1 83049 83867
AID17204.1 KJ586795_p116 hypothetical protein phrog_1063 terminase small subunit head and packaging -1 97332 97748
AID17129.1 KJ586795_p41 hypothetical protein phrog_9872 unknown function unknown function -1 23963 24349
AID17201.1 KJ586795_p113 hypothetical protein phrog_1917 virion structural protein head and packaging -1 94238 95077
AID17137.1 KJ586795_p49 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29871 32894
AID17102.1 KJ586795_p14 hypothetical protein phrog_10369 unknown function unknown function -1 5567 5716
AID17164.1 KJ586795_p76 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 54951 56696
AID17275.1 KJ586795_p187 hypothetical protein phrog_5149 unknown function unknown function -1 135140 135364
AID17128.1 KJ586795_p40 hypothetical protein phrog_1850 exopolyphosphatase other -1 23037 23966
AID17110.1 KJ586795_p22 hypothetical protein phrog_1007 unknown function unknown function -1 11023 11751
AID17101.1 KJ586795_p13 hypothetical protein phrog_12014 unknown function unknown function -1 4675 5457
AID17188.1 KJ586795_p100 hypothetical protein phrog_772 tail fiber protein tail -1 83885 84766
AID17224.1 KJ586795_p136 hypothetical protein singleton unknown function unknown function 1 111881 112150
AID17249.1 KJ586795_p161 hypothetical protein phrog_3392 unknown function unknown function -1 124316 124663
AID17268.1 KJ586795_p180 hypothetical protein phrog_10584 unknown function unknown function -1 132412 132585
AID17100.1 KJ586795_p12 hypothetical protein phrog_15935 unknown function unknown function -1 4206 4481
AID17139.1 KJ586795_p51 synaptonemal complex 1 (SCP-1) domain containing protein phrog_1054 unknown function unknown function -1 33283 34071
AID17230.1 KJ586795_p142 hypothetical protein phrog_1934 unknown function unknown function 1 114942 115361
AID17090.1 KJ586795_p2 hypothetical protein phrog_19346 unknown function unknown function -1 237 539
AID17098.1 KJ586795_p10 hypothetical protein phrog_15212 unknown function unknown function -1 3540 3749
AID17124.1 KJ586795_p36 hypothetical protein phrog_984 unknown function unknown function -1 19740 20459
AID17244.1 KJ586795_p156 hypothetical protein phrog_10214 unknown function unknown function -1 122227 122586
AID17147.1 KJ586795_p59 thioredoxin phrog_20804 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40054 40185
AID17252.1 KJ586795_p164 hypothetical protein phrog_4124 unknown function unknown function -1 125743 125952
AID17158.1 KJ586795_p70 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 47099 48160
AID17099.1 KJ586795_p11 hypothetical protein phrog_8573 unknown function unknown function -1 3823 4119
AID17257.1 KJ586795_p169 hypothetical protein phrog_4897 kinase other -1 128239 128829
AID17144.1 KJ586795_p56 hypothetical protein singleton unknown function unknown function -1 39425 39631
AID17190.1 KJ586795_p102 major capsid protein precursor phrog_752 major head protein head and packaging -1 85235 86638
AID17196.1 KJ586795_p108 3D-domain containing protein phrog_6631 unknown function unknown function -1 91036 91776
AID17162.1 KJ586795_p74 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 51815 53278
AID17166.1 KJ586795_p78 hypothetical protein phrog_9920 unknown function unknown function -1 56931 57341
AID17216.1 KJ586795_p128 helix-turn-helix XRE-family like protein phrog_3 transcriptional repressor transcription regulation 1 108166 108408
AID17171.1 KJ586795_p83 hypothetical protein phrog_2386 virion structural protein head and packaging -1 63045 66974
AID17149.1 KJ586795_p61 hypothetical protein phrog_9820 unknown function unknown function -1 40495 40791
AID17260.1 KJ586795_p172 hypothetical protein phrog_1150 unknown function unknown function -1 129570 129806
AID17266.1 KJ586795_p178 hypothetical protein phrog_9852 unknown function unknown function -1 131694 131981
AID17168.1 KJ586795_p80 hypothetical protein phrog_1074 unknown function unknown function -1 58668 58889
AID17143.1 KJ586795_p55 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 38514 39428
AID17112.1 KJ586795_p24 hypothetical protein phrog_10568 unknown function unknown function -1 12362 12940
AID17184.1 KJ586795_p96 hypothetical protein phrog_9471 unknown function unknown function -1 81260 81580
AID17173.1 KJ586795_p85 baseplate protein phrog_975 baseplate protein tail -1 68070 68780
AID17154.1 KJ586795_p66 hypothetical protein phrog_1095 unknown function unknown function -1 45449 45871
AID17250.1 KJ586795_p162 hypothetical protein phrog_799 DNA methyltransferase other -1 124773 125342
AID17150.1 KJ586795_p62 flavodoxin phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover -1 40794 41246
AID17153.1 KJ586795_p65 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 44826 45446
AID17174.1 KJ586795_p86 hypothetical protein phrog_1073 unknown function unknown function -1 68767 69300
AID17152.1 KJ586795_p64 ribonucleotide-diphosphate reductase subunit beta phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 42450 44711
AID17197.1 KJ586795_p109 lysin, N-acetylmuramoyl-L-alanine amidase phrog_5182 endolysin lysis -1 91949 92974
AID17167.1 KJ586795_p79 hypothetical protein phrog_9794 unknown function unknown function -1 57373 58665
AID17131.1 KJ586795_p43 holin phrog_263 holin lysis -1 25182 25547
AID17195.1 KJ586795_p107 hypothetical protein phrog_9678 unknown function unknown function -1 90613 90807
AID17170.1 KJ586795_p82 hypothetical protein phrog_1394 virion structural protein head and packaging -1 62407 62928
AID17106.1 KJ586795_p18 hypothetical protein phrog_9011 unknown function unknown function -1 8236 8769
AID17239.1 KJ586795_p151 hypothetical protein phrog_10844 unknown function unknown function 1 119744 120028
AID17096.1 KJ586795_p8 hypothetical protein phrog_4655 unknown function unknown function -1 2805 3080
AID17235.1 KJ586795_p147 hypothetical protein phrog_9937 unknown function unknown function 1 118222 118449
AID17246.1 KJ586795_p158 hypothetical protein phrog_12642 unknown function unknown function 1 122981 123196
AID17274.1 KJ586795_p186 hypothetical protein phrog_7822 unknown function unknown function -1 134695 135135
AID17094.1 KJ586795_p6 DNA modification protein Mom-like protein phrog_1384 Mom-like DNA modification protein other -1 1469 2122
AID17205.1 KJ586795_p117 hypothetical protein phrog_3395 membrane protein moron, auxiliary metabolic gene and host takeover -1 98010 98396
AID17242.1 KJ586795_p154 hypothetical protein phrog_9499 unknown function unknown function 1 121125 121391
AID17240.1 KJ586795_p152 hypothetical protein phrog_7296 unknown function unknown function 1 120247 120756
AID17214.1 KJ586795_p126 hypothetical protein phrog_1257 ribosome associated inhibitor A; zinc finger domain moron, auxiliary metabolic gene and host takeover 1 105935 106147
AID17183.1 KJ586795_p95 tail sheath protein phrog_279 tail sheath tail -1 79568 81256
AID17269.1 KJ586795_p181 hypothetical protein phrog_9566 unknown function unknown function -1 132819 133079
AID17161.1 KJ586795_p73 exonuclease phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 50748 51800
AID17207.1 KJ586795_p119 hypothetical protein phrog_937 hemolysin other 1 99166 99507
AID17148.1 KJ586795_p60 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40160 40471
AID17189.1 KJ586795_p101 hypothetical protein phrog_9462 unknown function unknown function -1 84773 85153
AID17193.1 KJ586795_p105 hypothetical protein phrog_12 portal protein head and packaging -1 88601 90244
AID17092.1 KJ586795_p4 hypothetical protein phrog_14056 unknown function unknown function -1 946 1152
AID17233.1 KJ586795_p145 hypothetical protein phrog_10136 unknown function unknown function 1 116542 116964
AID17270.1 KJ586795_p182 hypothetical protein phrog_38491 unknown function unknown function -1 133076 133210
AID17213.1 KJ586795_p125 hypothetical protein phrog_6885 unknown function unknown function 1 105616 105834
AID17199.1 KJ586795_p111 hypothetical protein phrog_1116 unknown function unknown function -1 93408 94046
AID17200.1 KJ586795_p112 hypothetical protein phrog_13012 unknown function unknown function -1 94036 94152
AID17221.1 KJ586795_p133 DUF1768 domain containing protein phrog_1017 unknown function unknown function 1 110922 111425
AID17165.1 KJ586795_p77 XkdX domain containing protein phrog_134 unknown function unknown function -1 56797 56934
AID17236.1 KJ586795_p148 hypothetical protein phrog_9379 unknown function unknown function 1 118446 118988
AID17203.1 KJ586795_p115 terminase phrog_5340 terminase large subunit head and packaging -1 97051 97332
AID17226.1 KJ586795_p138 hypothetical protein phrog_9618 unknown function unknown function 1 113184 113540
AID17215.1 KJ586795_p127 DUF2828 domain containing protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 106545 108065
AID17180.1 KJ586795_p92 hypothetical protein phrog_1316 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism -1 77828 78415
AID17185.1 KJ586795_p97 hypothetical protein phrog_1000 unknown function unknown function -1 81580 82419
AID17247.1 KJ586795_p159 hypothetical protein phrog_9112 unknown function unknown function -1 123611 123943
AID17248.1 KJ586795_p160 hypothetical protein phrog_9728 unknown function unknown function -1 124024 124284
AID17119.1 KJ586795_p31 hypothetical protein phrog_9512 unknown function unknown function -1 16522 17226
AID17194.1 KJ586795_p106 hypothetical protein phrog_1108 portal protein head and packaging -1 90261 90611
AID17175.1 KJ586795_p87 hypothetical protein phrog_1011 virion structural protein head and packaging -1 69305 70018
AID17132.1 KJ586795_p44 hypothetical protein phrog_1025 RNA polymerase sigma factor transcription regulation -1 25606 26244
AID17241.1 KJ586795_p153 hypothetical protein phrog_9952 unknown function unknown function 1 120860 121078
AID17272.1 KJ586795_p184 hypothetical protein phrog_38720 unknown function unknown function -1 134190 134381
AID17202.1 KJ586795_p114 terminase phrog_675 terminase large subunit head and packaging -1 95228 96700
AID17229.1 KJ586795_p141 phosphoesterase phrog_547 phosphoesterase other 1 114152 114769
AID17177.1 KJ586795_p89 tail lysin singleton unknown function unknown function -1 71606 72436
AID17116.1 KJ586795_p28 hypothetical protein phrog_7005 unknown function unknown function -1 14670 15515
AID17222.1 KJ586795_p134 hypothetical protein phrog_9898 unknown function unknown function 1 111426 111617
AID17192.1 KJ586795_p104 prohead protease phrog_1028 head maturation protease head and packaging -1 87708 88502
AID17117.1 KJ586795_p29 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 15502 16254
AID17238.1 KJ586795_p150 hypothetical protein phrog_9730 unknown function unknown function 1 119551 119670
AID17255.1 KJ586795_p167 hypothetical protein phrog_923 unknown function unknown function -1 126847 127614
AID17115.1 KJ586795_p27 hypothetical protein phrog_7350 unknown function unknown function -1 14141 14608
AID17191.1 KJ586795_p103 hypothetical protein phrog_1133 unknown function unknown function -1 86810 87715
AID17237.1 KJ586795_p149 hypothetical protein phrog_9517 unknown function unknown function 1 119273 119554
AID17157.1 KJ586795_p69 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 46405 47052
AID17227.1 KJ586795_p139 HAD-like domain containing protein phrog_1238 phosphoheptose isomerase moron, auxiliary metabolic gene and host takeover 1 113543 113920
AID17130.1 KJ586795_p42 Ig-like domain containing protein phrog_215 structural protein with Ig domain head and packaging -1 24457 25164
AID17179.1 KJ586795_p91 tail lysin phrog_1047 tail associated lysin tail -1 74038 77766
AID17105.1 KJ586795_p17 hypothetical protein phrog_9671 unknown function unknown function -1 7463 8221
AID17155.1 KJ586795_p67 hypothetical protein phrog_7516 unknown function unknown function -1 45864 46187
AID17114.1 KJ586795_p26 hypothetical protein phrog_7350 unknown function unknown function -1 13557 14135
AID17103.1 KJ586795_p15 hypothetical protein phrog_3543 unknown function unknown function -1 5800 6159
AID17135.1 KJ586795_p47 hypothetical protein phrog_1867 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 27997 29262
AID17107.1 KJ586795_p19 hypothetical protein phrog_9719 unknown function unknown function -1 8772 9341
AID17145.1 KJ586795_p57 hypothetical protein phrog_9795 unknown function unknown function -1 39634 39771
AID17273.1 KJ586795_p185 hypothetical protein phrog_14860 unknown function unknown function -1 134371 134586
AID17141.1 KJ586795_p53 hypothetical protein singleton unknown function unknown function -1 35997 36623