Genomic map of Streptococcus phage SOCP (KJ617393)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ617393
Definition
Streptococcus phage SOCP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Cepunavirus; Streptococcus virus Cp1; Streptococcus phage Cp1.
DB of origin
PVOG
Length
19347
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
27
%GC
38.82
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AID18048.1 KJ617393_p5 DNA polymerase singleton unknown function unknown function 1 2040 2609
AID18067.1 KJ617393_p26 hypothetical protein phrog_27339 unknown function unknown function -1 18424 18693
AID18044.1 KJ617393_p1 hypothetical protein phrog_22499 unknown function unknown function 1 376 642
AID18050.1 KJ617393_p7 hypothetical protein phrog_26305 unknown function unknown function 1 3702 4148
AID18070.1 KJ617393_p25 hypothetical protein phrog_29520 unknown function unknown function -1 18148 18423
AID18061.1 KJ617393_p18 tail protein phrog_30532 tail protein tail 1 11515 13077
AID18047.1 KJ617393_p4 terminal protein phrog_26145 unknown function unknown function 1 1351 2043
AID18049.1 KJ617393_p6 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2681 3745
AID18045.1 KJ617393_p2 hypothetical protein phrog_24156 unknown function unknown function 1 657 947
AID18051.1 KJ617393_p8 hypothetical protein phrog_22891 unknown function unknown function 1 4141 4653
AID18060.1 KJ617393_p17 hypothetical protein phrog_15030 unknown function unknown function 1 10787 11548
AID18046.1 KJ617393_p3 hypothetical protein singleton unknown function unknown function 1 1074 1346
AID18066.1 KJ617393_p24 hypothetical protein phrog_1027 unknown function unknown function -1 17901 18143
AID18053.1 KJ617393_p10 major capsid protein phrog_2006 major head protein head and packaging 1 5409 6506
AID18056.1 KJ617393_p13 hypothetical protein phrog_27791 unknown function unknown function 1 8223 8807
AID18054.1 KJ617393_p11 connector protein phrog_2038 upper collar connector connector 1 6563 7576
AID18055.1 KJ617393_p12 collar protein phrog_26520 lower collar tail 1 7563 8210
AID18069.1 KJ617393_p23 hypothetical protein singleton unknown function unknown function -1 17480 17896
AID18065.1 KJ617393_p22 endolysin phrog_6745 endolysin lysis 1 16433 17452
AID18059.1 KJ617393_p16 hypothetical protein phrog_17155 unknown function unknown function 1 10011 10787
AID18058.1 KJ617393_p15 hypothetical protein phrog_35592 unknown function unknown function 1 9102 9989
AID18064.1 KJ617393_p21 holin phrog_199 holin lysis 1 16029 16433
AID18068.1 KJ617393_p27 hypothetical protein singleton unknown function unknown function -1 18704 18973
AID18063.1 KJ617393_p20 encapsidation protein phrog_2150 terminase head and packaging 1 14993 16039
AID18057.1 KJ617393_p14 hypothetical protein phrog_23584 unknown function unknown function 1 8804 9118
AID18062.1 KJ617393_p19 tail protein phrog_2248 tail protein tail 1 13081 14919
AID18052.1 KJ617393_p9 scaffolding protein phrog_25389 unknown function unknown function 1 4875 5165