| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KJ803031 |
Definition |
Dinoroseobacter phage vBDshPR2C, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus; unclassified Baltimorevirus. |
DB of origin |
PVOG |
Length |
74806 |
Host Name |
Dinoroseobacter shibae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
85 |
%GC |
49.16 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AID16846.1 | KJ803031_p31 | hypothetical protein | phrog_1627 | unknown function | unknown function | 1 | 15050 | 15379 |
| AID16851.1 | KJ803031_p36 | hypothetical protein | phrog_6368 | unknown function | unknown function | 1 | 18482 | 19474 |
| AID16891.1 | KJ803031_p76 | hypothetical protein | phrog_13075 | unknown function | unknown function | -1 | 66389 | 66796 |
| AID16867.1 | KJ803031_p52 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 30400 | 31677 |
| AID16845.1 | KJ803031_p30 | hypothetical protein | phrog_20849 | unknown function | unknown function | 1 | 14620 | 14733 |
| AID16854.1 | KJ803031_p39 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 20286 | 20603 |
| AID16824.1 | KJ803031_p8 | RNA polymerase subunit 1 | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2937 | 3728 |
| AID16896.1 | KJ803031_p81 | hypothetical protein | phrog_12736 | virion structural protein | head and packaging | 1 | 70162 | 72489 |
| AID16899.1 | KJ803031_p84 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 73843 | 74181 |
| AID16859.1 | KJ803031_p44 | hypothetical protein | phrog_38738 | unknown function | unknown function | 1 | 25477 | 25776 |
| AID16831.1 | KJ803031_p15 | hypothetical protein | phrog_26997 | unknown function | unknown function | 1 | 5103 | 5387 |
| AID16864.1 | KJ803031_p49 | hypothetical protein | phrog_14950 | unknown function | unknown function | 1 | 27219 | 27575 |
| AID16862.1 | KJ803031_p47 | hypothetical protein | phrog_9905 | unknown function | unknown function | 1 | 26394 | 26687 |
| AID16817.1 | KJ803031_p1 | hypothetical protein | phrog_14155 | unknown function | unknown function | 1 | 168 | 425 |
| AID16895.1 | KJ803031_p80 | hypothetical protein | phrog_13099 | virion structural protein | head and packaging | 1 | 69842 | 70162 |
| AID16893.1 | KJ803031_p78 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67474 | 69093 |
| AID16880.1 | KJ803031_p65 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 54014 | 56749 |
| AID16825.1 | KJ803031_p9 | hypothetical protein | phrog_23470 | unknown function | unknown function | 1 | 3721 | 4041 |
| AID16860.1 | KJ803031_p45 | hypothetical protein | phrog_33899 | unknown function | unknown function | 1 | 25763 | 25966 |
| AID16883.1 | KJ803031_p68 | structural protein | phrog_1357 | major head protein | head and packaging | -1 | 58987 | 60432 |
| AID16847.1 | KJ803031_p32 | hypothetical protein | phrog_4368 | unknown function | unknown function | 1 | 15376 | 15879 |
| AID16821.1 | KJ803031_p5 | hypothetical protein | phrog_35131 | unknown function | unknown function | 1 | 1237 | 1476 |
| AID16840.1 | KJ803031_p25 | hypothetical protein | phrog_16467 | unknown function | unknown function | 1 | 11318 | 11779 |
| AID16858.1 | KJ803031_p43 | homing endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 25217 | 25522 |
| AID16865.1 | KJ803031_p50 | ribonucleoside-diphosphate redutase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 27648 | 29987 |
| AID16839.1 | KJ803031_p24 | hypothetical protein | phrog_20493 | unknown function | unknown function | 1 | 10846 | 11109 |
| AID16889.1 | KJ803031_p74 | host-like protein | phrog_5867 | endolysin | lysis | -1 | 65167 | 65826 |
| AID16901.1 | KJ803031_p21 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8727 | 10079 |
| AID16850.1 | KJ803031_p35 | hypothetical protein | phrog_37785 | unknown function | unknown function | 1 | 17638 | 18471 |
| AID16855.1 | KJ803031_p40 | hypothetical protein | phrog_2380 | unknown function | unknown function | 1 | 20757 | 20978 |
| AID16837.1 | KJ803031_p22 | hypothetical protein | phrog_8231 | unknown function | unknown function | 1 | 10081 | 10377 |
| AID16826.1 | KJ803031_p10 | hypothetical protein | phrog_37447 | unknown function | unknown function | 1 | 4052 | 4156 |
| AID16874.1 | KJ803031_p59 | single-strand DNA binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38854 | 39672 |
| AID16830.1 | KJ803031_p14 | hypothetical protein | phrog_13436 | unknown function | unknown function | 1 | 4856 | 5101 |
| AID16836.1 | KJ803031_p20 | hypothetical protein | phrog_29075 | unknown function | unknown function | 1 | 8267 | 8851 |
| AID16892.1 | KJ803031_p77 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66796 | 67464 |
| AID16897.1 | KJ803031_p82 | hypothetical protein | phrog_6368 | unknown function | unknown function | 1 | 72519 | 73493 |
| AID16842.1 | KJ803031_p27 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 12208 | 13194 |
| AID16871.1 | KJ803031_p56 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34905 | 35900 |
| AID16900.1 | KJ803031_p85 | hypothetical protein | phrog_34203 | unknown function | unknown function | 1 | 74457 | 74582 |
| AID16887.1 | KJ803031_p72 | hypothetical protein | phrog_32876 | unknown function | unknown function | -1 | 64663 | 64809 |
| AID16834.1 | KJ803031_p18 | hypothetical protein | phrog_12776 | unknown function | unknown function | 1 | 6836 | 7033 |
| AID16884.1 | KJ803031_p69 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 60462 | 61814 |
| AID16869.1 | KJ803031_p54 | hypothetical protein | phrog_4848 | unknown function | unknown function | 1 | 31960 | 32289 |
| AID16852.1 | KJ803031_p37 | hypothetical protein | phrog_18048 | unknown function | unknown function | 1 | 19478 | 19708 |
| AID16843.1 | KJ803031_p28 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 13243 | 14406 |
| AID16879.1 | KJ803031_p64 | structural protein | phrog_2646 | unknown function | unknown function | -1 | 53568 | 54011 |
| AID16838.1 | KJ803031_p23 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 10361 | 10849 |
| AID16877.1 | KJ803031_p62 | virion-encapsulated RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 40767 | 51434 |
| AID16853.1 | KJ803031_p38 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 19763 | 20305 |
| AID16885.1 | KJ803031_p70 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 61861 | 62244 |
| AID16841.1 | KJ803031_p26 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 11772 | 12221 |
| AID16898.1 | KJ803031_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73570 | 73767 |
| AID16870.1 | KJ803031_p55 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 32293 | 34908 |
| AID16863.1 | KJ803031_p48 | hypothetical protein | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | 1 | 26737 | 27222 |
| AID16882.1 | KJ803031_p67 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 58153 | 58875 |
| AID16866.1 | KJ803031_p51 | hypothetical protein | phrog_20171 | unknown function | unknown function | 1 | 30053 | 30412 |
| AID16868.1 | KJ803031_p53 | hypothetical protein | phrog_6035 | unknown function | unknown function | 1 | 31674 | 31979 |
| AID16881.1 | KJ803031_p66 | structural protein | phrog_2050 | virion structural protein | head and packaging | -1 | 56762 | 58114 |
| AID16890.1 | KJ803031_p75 | hypothetical protein | phrog_16098 | unknown function | unknown function | -1 | 65823 | 66392 |
| AID16832.1 | KJ803031_p16 | hypothetical protein | phrog_14069 | unknown function | unknown function | 1 | 5371 | 5568 |
| AID16827.1 | KJ803031_p11 | hypothetical protein | phrog_18488 | unknown function | unknown function | 1 | 4160 | 4444 |
| AID16828.1 | KJ803031_p12 | hypothetical protein | phrog_36711 | unknown function | unknown function | 1 | 4441 | 4587 |
| AID16823.1 | KJ803031_p7 | hypothetical protein | phrog_1017 | unknown function | unknown function | 1 | 2482 | 2940 |
| AID16861.1 | KJ803031_p46 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 25963 | 26397 |
| AID16894.1 | KJ803031_p79 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69080 | 69769 |
| AID16844.1 | KJ803031_p29 | hypothetical protein | phrog_1761 | unknown function | unknown function | 1 | 14393 | 14620 |
| AID16878.1 | KJ803031_p63 | hypothetical protein | phrog_14527 | unknown function | unknown function | -1 | 51500 | 53557 |
| AID16873.1 | KJ803031_p58 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 38062 | 38799 |
| AID16872.1 | KJ803031_p57 | DNA replication protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 35893 | 38052 |
| AID16876.1 | KJ803031_p61 | hypothetical protein | phrog_22866 | unknown function | unknown function | 1 | 40591 | 40770 |
| AID16829.1 | KJ803031_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4584 | 4859 |
| AID16835.1 | KJ803031_p19 | AAA superfamily ATPase | phrog_1297 | ATPase | other | 1 | 7078 | 8262 |
| AID16857.1 | KJ803031_p42 | RIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 23583 | 25013 |
| AID16849.1 | KJ803031_p34 | hypothetical protein | phrog_18179 | virion structural protein | head and packaging | 1 | 16406 | 17602 |
| AID16822.1 | KJ803031_p6 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 1645 | 2064 |
| AID16875.1 | KJ803031_p60 | hypothetical protein | phrog_14238 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 39669 | 40601 |
| AID16886.1 | KJ803031_p71 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 62298 | 64652 |
| AID16888.1 | KJ803031_p73 | hypothetical protein | phrog_18816 | unknown function | unknown function | -1 | 64838 | 65170 |
| AID16856.1 | KJ803031_p41 | RIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 21008 | 23560 |
| AID16819.1 | KJ803031_p3 | hypothetical protein | phrog_28829 | unknown function | unknown function | 1 | 848 | 988 |
| AID16818.1 | KJ803031_p2 | hypothetical protein | phrog_31296 | unknown function | unknown function | 1 | 606 | 851 |
| AID16833.1 | KJ803031_p17 | RNA polymerase subunit 2 | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5562 | 6770 |
| AID16848.1 | KJ803031_p33 | hypothetical protein | phrog_4368 | unknown function | unknown function | 1 | 15883 | 16389 |
| AID16820.1 | KJ803031_p4 | hypothetical protein | phrog_35558 | unknown function | unknown function | 1 | 972 | 1220 |