Genomic map of Dinoroseobacter phage vBDshPR2C (KJ803031)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ803031
Definition
Dinoroseobacter phage vBDshPR2C, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus; unclassified Baltimorevirus.
DB of origin
PVOG
Length
74806
Host Name
Dinoroseobacter shibae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
85
%GC
49.16
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AID16846.1 KJ803031_p31 hypothetical protein phrog_1627 unknown function unknown function 1 15050 15379
AID16851.1 KJ803031_p36 hypothetical protein phrog_6368 unknown function unknown function 1 18482 19474
AID16891.1 KJ803031_p76 hypothetical protein phrog_13075 unknown function unknown function -1 66389 66796
AID16867.1 KJ803031_p52 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 30400 31677
AID16845.1 KJ803031_p30 hypothetical protein phrog_20849 unknown function unknown function 1 14620 14733
AID16854.1 KJ803031_p39 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 20286 20603
AID16824.1 KJ803031_p8 RNA polymerase subunit 1 phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 2937 3728
AID16896.1 KJ803031_p81 hypothetical protein phrog_12736 virion structural protein head and packaging 1 70162 72489
AID16899.1 KJ803031_p84 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 73843 74181
AID16859.1 KJ803031_p44 hypothetical protein phrog_38738 unknown function unknown function 1 25477 25776
AID16831.1 KJ803031_p15 hypothetical protein phrog_26997 unknown function unknown function 1 5103 5387
AID16864.1 KJ803031_p49 hypothetical protein phrog_14950 unknown function unknown function 1 27219 27575
AID16862.1 KJ803031_p47 hypothetical protein phrog_9905 unknown function unknown function 1 26394 26687
AID16817.1 KJ803031_p1 hypothetical protein phrog_14155 unknown function unknown function 1 168 425
AID16895.1 KJ803031_p80 hypothetical protein phrog_13099 virion structural protein head and packaging 1 69842 70162
AID16893.1 KJ803031_p78 hypothetical protein phrog_38 terminase large subunit head and packaging -1 67474 69093
AID16880.1 KJ803031_p65 hypothetical protein phrog_2220 unknown function unknown function -1 54014 56749
AID16825.1 KJ803031_p9 hypothetical protein phrog_23470 unknown function unknown function 1 3721 4041
AID16860.1 KJ803031_p45 hypothetical protein phrog_33899 unknown function unknown function 1 25763 25966
AID16883.1 KJ803031_p68 structural protein phrog_1357 major head protein head and packaging -1 58987 60432
AID16847.1 KJ803031_p32 hypothetical protein phrog_4368 unknown function unknown function 1 15376 15879
AID16821.1 KJ803031_p5 hypothetical protein phrog_35131 unknown function unknown function 1 1237 1476
AID16840.1 KJ803031_p25 hypothetical protein phrog_16467 unknown function unknown function 1 11318 11779
AID16858.1 KJ803031_p43 homing endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 25217 25522
AID16865.1 KJ803031_p50 ribonucleoside-diphosphate redutase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 27648 29987
AID16839.1 KJ803031_p24 hypothetical protein phrog_20493 unknown function unknown function 1 10846 11109
AID16889.1 KJ803031_p74 host-like protein phrog_5867 endolysin lysis -1 65167 65826
AID16901.1 KJ803031_p21 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 8727 10079
AID16850.1 KJ803031_p35 hypothetical protein phrog_37785 unknown function unknown function 1 17638 18471
AID16855.1 KJ803031_p40 hypothetical protein phrog_2380 unknown function unknown function 1 20757 20978
AID16837.1 KJ803031_p22 hypothetical protein phrog_8231 unknown function unknown function 1 10081 10377
AID16826.1 KJ803031_p10 hypothetical protein phrog_37447 unknown function unknown function 1 4052 4156
AID16874.1 KJ803031_p59 single-strand DNA binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 38854 39672
AID16830.1 KJ803031_p14 hypothetical protein phrog_13436 unknown function unknown function 1 4856 5101
AID16836.1 KJ803031_p20 hypothetical protein phrog_29075 unknown function unknown function 1 8267 8851
AID16892.1 KJ803031_p77 hypothetical protein phrog_2125 virion structural protein head and packaging -1 66796 67464
AID16897.1 KJ803031_p82 hypothetical protein phrog_6368 unknown function unknown function 1 72519 73493
AID16842.1 KJ803031_p27 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 12208 13194
AID16871.1 KJ803031_p56 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 34905 35900
AID16900.1 KJ803031_p85 hypothetical protein phrog_34203 unknown function unknown function 1 74457 74582
AID16887.1 KJ803031_p72 hypothetical protein phrog_32876 unknown function unknown function -1 64663 64809
AID16834.1 KJ803031_p18 hypothetical protein phrog_12776 unknown function unknown function 1 6836 7033
AID16884.1 KJ803031_p69 hypothetical protein phrog_2120 tail length tape measure protein tail -1 60462 61814
AID16869.1 KJ803031_p54 hypothetical protein phrog_4848 unknown function unknown function 1 31960 32289
AID16852.1 KJ803031_p37 hypothetical protein phrog_18048 unknown function unknown function 1 19478 19708
AID16843.1 KJ803031_p28 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 13243 14406
AID16879.1 KJ803031_p64 structural protein phrog_2646 unknown function unknown function -1 53568 54011
AID16838.1 KJ803031_p23 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 10361 10849
AID16877.1 KJ803031_p62 virion-encapsulated RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 40767 51434
AID16853.1 KJ803031_p38 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 19763 20305
AID16885.1 KJ803031_p70 hypothetical protein phrog_2346 unknown function unknown function -1 61861 62244
AID16841.1 KJ803031_p26 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 11772 12221
AID16898.1 KJ803031_p83 hypothetical protein singleton unknown function unknown function -1 73570 73767
AID16870.1 KJ803031_p55 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 32293 34908
AID16863.1 KJ803031_p48 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism 1 26737 27222
AID16882.1 KJ803031_p67 hypothetical protein phrog_2130 unknown function unknown function -1 58153 58875
AID16866.1 KJ803031_p51 hypothetical protein phrog_20171 unknown function unknown function 1 30053 30412
AID16868.1 KJ803031_p53 hypothetical protein phrog_6035 unknown function unknown function 1 31674 31979
AID16881.1 KJ803031_p66 structural protein phrog_2050 virion structural protein head and packaging -1 56762 58114
AID16890.1 KJ803031_p75 hypothetical protein phrog_16098 unknown function unknown function -1 65823 66392
AID16832.1 KJ803031_p16 hypothetical protein phrog_14069 unknown function unknown function 1 5371 5568
AID16827.1 KJ803031_p11 hypothetical protein phrog_18488 unknown function unknown function 1 4160 4444
AID16828.1 KJ803031_p12 hypothetical protein phrog_36711 unknown function unknown function 1 4441 4587
AID16823.1 KJ803031_p7 hypothetical protein phrog_1017 unknown function unknown function 1 2482 2940
AID16861.1 KJ803031_p46 hypothetical protein phrog_2072 unknown function unknown function 1 25963 26397
AID16894.1 KJ803031_p79 hypothetical protein phrog_2109 unknown function unknown function -1 69080 69769
AID16844.1 KJ803031_p29 hypothetical protein phrog_1761 unknown function unknown function 1 14393 14620
AID16878.1 KJ803031_p63 hypothetical protein phrog_14527 unknown function unknown function -1 51500 53557
AID16873.1 KJ803031_p58 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 38062 38799
AID16872.1 KJ803031_p57 DNA replication protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 35893 38052
AID16876.1 KJ803031_p61 hypothetical protein phrog_22866 unknown function unknown function 1 40591 40770
AID16829.1 KJ803031_p13 hypothetical protein singleton unknown function unknown function 1 4584 4859
AID16835.1 KJ803031_p19 AAA superfamily ATPase phrog_1297 ATPase other 1 7078 8262
AID16857.1 KJ803031_p42 RIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 23583 25013
AID16849.1 KJ803031_p34 hypothetical protein phrog_18179 virion structural protein head and packaging 1 16406 17602
AID16822.1 KJ803031_p6 hypothetical protein phrog_4099 unknown function unknown function 1 1645 2064
AID16875.1 KJ803031_p60 hypothetical protein phrog_14238 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 39669 40601
AID16886.1 KJ803031_p71 portal protein phrog_1216 portal protein head and packaging -1 62298 64652
AID16888.1 KJ803031_p73 hypothetical protein phrog_18816 unknown function unknown function -1 64838 65170
AID16856.1 KJ803031_p41 RIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 21008 23560
AID16819.1 KJ803031_p3 hypothetical protein phrog_28829 unknown function unknown function 1 848 988
AID16818.1 KJ803031_p2 hypothetical protein phrog_31296 unknown function unknown function 1 606 851
AID16833.1 KJ803031_p17 RNA polymerase subunit 2 phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 5562 6770
AID16848.1 KJ803031_p33 hypothetical protein phrog_4368 unknown function unknown function 1 15883 16389
AID16820.1 KJ803031_p4 hypothetical protein phrog_35558 unknown function unknown function 1 972 1220