| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KJ829260 |
Definition |
Mycobacterium phage YungJamal, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus. |
DB of origin |
PVOG |
Length |
70214 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
124 |
%GC |
65.34 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AII28292.1 | KJ829260_p53 | hypothetical protein | phrog_11719 | unknown function | unknown function | -1 | 25341 | 25532 |
| AII28301.1 | KJ829260_p62 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 36703 | 37551 |
| AII28353.1 | KJ829260_p114 | hypothetical protein | phrog_10868 | unknown function | unknown function | -1 | 66319 | 66420 |
| AII28345.1 | KJ829260_p106 | hypothetical protein | phrog_3207 | unknown function | unknown function | -1 | 63727 | 63999 |
| AII28309.1 | KJ829260_p70 | hypothetical protein | phrog_12052 | unknown function | unknown function | 1 | 43480 | 43599 |
| AII28244.1 | KJ829260_p5 | hypothetical protein | phrog_6910 | unknown function | unknown function | -1 | 1109 | 1579 |
| AII28317.1 | KJ829260_p78 | HTH DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 47897 | 48304 |
| AII28363.1 | KJ829260_p124 | hypothetical protein | phrog_11142 | unknown function | unknown function | 1 | 69388 | 70101 |
| AII28279.1 | KJ829260_p40 | head maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 19468 | 20133 |
| AII28274.1 | KJ829260_p35 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15421 | 16650 |
| AII28356.1 | KJ829260_p117 | hypothetical protein | phrog_11310 | unknown function | unknown function | -1 | 66843 | 67247 |
| AII28242.1 | KJ829260_p3 | hypothetical protein | phrog_11270 | unknown function | unknown function | -1 | 649 | 966 |
| AII28308.1 | KJ829260_p69 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 42794 | 43480 |
| AII28350.1 | KJ829260_p111 | hypothetical protein | phrog_2164 | unknown function | unknown function | -1 | 65131 | 65646 |
| AII28361.1 | KJ829260_p122 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68322 | 68516 |
| AII28272.1 | KJ829260_p33 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 13409 | 14920 |
| AII28256.1 | KJ829260_p17 | hypothetical protein | phrog_10414 | unknown function | unknown function | 1 | 6978 | 7352 |
| AII28248.1 | KJ829260_p9 | hypothetical protein | phrog_6074 | unknown function | unknown function | -1 | 2705 | 3043 |
| AII28241.1 | KJ829260_p2 | hypothetical protein | phrog_10880 | unknown function | unknown function | -1 | 437 | 649 |
| AII28339.1 | KJ829260_p100 | hypothetical protein | phrog_889 | unknown function | unknown function | -1 | 61594 | 62022 |
| AII28286.1 | KJ829260_p47 | hypothetical protein | phrog_11597 | unknown function | unknown function | 1 | 23000 | 23320 |
| AII28246.1 | KJ829260_p7 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 1931 | 2521 |
| AII28287.1 | KJ829260_p48 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 23304 | 23690 |
| AII28326.1 | KJ829260_p87 | hypothetical protein | phrog_11365 | unknown function | unknown function | -1 | 53310 | 53582 |
| AII28334.1 | KJ829260_p95 | hypothetical protein | phrog_11085 | unknown function | unknown function | -1 | 57967 | 58239 |
| AII28342.1 | KJ829260_p103 | hypothetical protein | phrog_11120 | unknown function | unknown function | -1 | 62530 | 62859 |
| AII28293.1 | KJ829260_p54 | HTH transcription regulator | phrog_11503 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25529 | 25984 |
| AII28300.1 | KJ829260_p61 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 34927 | 36663 |
| AII28351.1 | KJ829260_p112 | hypothetical protein | phrog_12168 | unknown function | unknown function | -1 | 65636 | 65893 |
| AII28294.1 | KJ829260_p56 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 26055 | 26609 |
| AII28257.1 | KJ829260_p18 | hypothetical protein | phrog_10983 | unknown function | unknown function | 1 | 7345 | 7656 |
| AII28254.1 | KJ829260_p15 | hypothetical protein | phrog_11773 | unknown function | unknown function | 1 | 6051 | 6206 |
| AII28302.1 | KJ829260_p63 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 37548 | 40058 |
| AII28260.1 | KJ829260_p21 | DNA primase/polymerase | phrog_11515 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 8104 | 10467 |
| AII28357.1 | KJ829260_p118 | hypothetical protein | phrog_11204 | unknown function | unknown function | -1 | 67261 | 67548 |
| AII28258.1 | KJ829260_p19 | hypothetical protein | phrog_11308 | unknown function | unknown function | 1 | 7680 | 7880 |
| AII28313.1 | KJ829260_p74 | hypothetical protein | phrog_3888 | unknown function | unknown function | 1 | 46217 | 46516 |
| AII28307.1 | KJ829260_p68 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 42606 | 42794 |
| AII28299.1 | KJ829260_p60 | hypothetical protein | phrog_4160 | unknown function | unknown function | -1 | 34349 | 34831 |
| AII28250.1 | KJ829260_p11 | Endo VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 3306 | 3791 |
| AII28343.1 | KJ829260_p104 | hypothetical protein | phrog_6351 | unknown function | unknown function | -1 | 62856 | 63263 |
| AII28273.1 | KJ829260_p34 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14950 | 15420 |
| AII28328.1 | KJ829260_p89 | hypothetical protein | phrog_12859 | unknown function | unknown function | -1 | 54507 | 54734 |
| AII28305.1 | KJ829260_p66 | minor tail protein | phrog_8501 | minor tail protein | tail | 1 | 41958 | 42359 |
| AII28297.1 | KJ829260_p58 | tapemeasure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 28228 | 32613 |
| AII28255.1 | KJ829260_p16 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 6232 | 6954 |
| AII28290.1 | KJ829260_p51 | hypothetical protein | phrog_14205 | unknown function | unknown function | -1 | 25076 | 25171 |
| AII28338.1 | KJ829260_p99 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 61278 | 61508 |
| AII28329.1 | KJ829260_p90 | hypothetical protein | phrog_13372 | unknown function | unknown function | -1 | 54742 | 55017 |
| AII28284.1 | KJ829260_p45 | hypothetical protein | phrog_11160 | unknown function | unknown function | 1 | 22504 | 22641 |
| AII28270.1 | KJ829260_p31 | hypothetical protein | phrog_11114 | unknown function | unknown function | 1 | 12678 | 13148 |
| AII28263.1 | KJ829260_p24 | hypothetical protein | phrog_37181 | unknown function | unknown function | -1 | 10845 | 10958 |
| AII28288.1 | KJ829260_p49 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 23683 | 24135 |
| AII28310.1 | KJ829260_p71 | lysin A | phrog_700 | endolysin | lysis | 1 | 43649 | 44869 |
| AII28281.1 | KJ829260_p42 | capsid protein | phrog_2263 | major head protein | head and packaging | 1 | 20419 | 21651 |
| AII28316.1 | KJ829260_p77 | hypothetical protein | phrog_11086 | unknown function | unknown function | 1 | 47488 | 47928 |
| AII28261.1 | KJ829260_p22 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 10460 | 10660 |
| AII28352.1 | KJ829260_p113 | hypothetical protein | phrog_8253 | unknown function | unknown function | -1 | 65897 | 66319 |
| AII28247.1 | KJ829260_p8 | hypothetical protein | phrog_11562 | unknown function | unknown function | -1 | 2518 | 2712 |
| AII28325.1 | KJ829260_p86 | DNA polymerase III beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 52060 | 53238 |
| AII28296.1 | KJ829260_p57 | hypothetical protein | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27006 | 27605 |
| AII28349.1 | KJ829260_p110 | hypothetical protein | phrog_11392 | unknown function | unknown function | -1 | 64923 | 65144 |
| AII28275.1 | KJ829260_p36 | O-methyltransferase | phrog_6608 | methyltransferase | other | 1 | 16647 | 17231 |
| AII28249.1 | KJ829260_p10 | hypothetical protein | phrog_18603 | unknown function | unknown function | -1 | 3040 | 3303 |
| AII28277.1 | KJ829260_p38 | glycosyltransferase | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 18090 | 18782 |
| AII28318.1 | KJ829260_p79 | hypothetical protein | phrog_5798 | unknown function | unknown function | -1 | 48363 | 48602 |
| AII28282.1 | KJ829260_p43 | hypothetical protein | phrog_11246 | unknown function | unknown function | 1 | 21651 | 21875 |
| AII28245.1 | KJ829260_p6 | DNA methylase | phrog_1008 | DNA methyltransferase | other | -1 | 1576 | 2139 |
| AII28265.1 | KJ829260_p26 | hypothetical protein | phrog_11069 | transcriptional regulator WhiB-like | transcription regulation | -1 | 11242 | 11550 |
| AII28348.1 | KJ829260_p109 | hypothetical protein | phrog_11047 | unknown function | unknown function | -1 | 64672 | 64926 |
| AII28319.1 | KJ829260_p80 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 48599 | 48976 |
| AII28323.1 | KJ829260_p84 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 50544 | 51269 |
| AII28359.1 | KJ829260_p120 | hypothetical protein | phrog_26184 | unknown function | unknown function | -1 | 67685 | 67945 |
| AII28306.1 | KJ829260_p67 | hypothetical protein | phrog_8357 | unknown function | unknown function | 1 | 42369 | 42593 |
| AII28264.1 | KJ829260_p25 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 10948 | 11214 |
| AII28330.1 | KJ829260_p91 | ParB-like domain protein | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 55194 | 56702 |
| AII28311.1 | KJ829260_p72 | lysin B | phrog_102 | endolysin | lysis | 1 | 44871 | 45911 |
| AII28358.1 | KJ829260_p119 | hypothetical protein | phrog_9101 | unknown function | unknown function | -1 | 67545 | 67688 |
| AII28333.1 | KJ829260_p94 | hypothetical protein | phrog_11784 | unknown function | unknown function | -1 | 57636 | 57977 |
| AII28337.1 | KJ829260_p98 | hypothetical protein | phrog_2939 | unknown function | unknown function | -1 | 60959 | 61261 |
| AII28340.1 | KJ829260_p101 | hypothetical protein | phrog_11313 | unknown function | unknown function | -1 | 62071 | 62361 |
| AII28314.1 | KJ829260_p75 | hypothetical protein | phrog_11815 | unknown function | unknown function | 1 | 46527 | 47003 |
| AII28303.1 | KJ829260_p64 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 40051 | 41541 |
| AII28252.1 | KJ829260_p13 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 5022 | 5309 |
| AII28276.1 | KJ829260_p37 | hypothetical protein | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 17224 | 18093 |
| AII28240.1 | KJ829260_p1 | hypothetical protein | phrog_4307 | unknown function | unknown function | -1 | 168 | 437 |
| AII28362.1 | KJ829260_p123 | hypothetical protein | phrog_13622 | unknown function | unknown function | -1 | 68513 | 69157 |
| AII28289.1 | KJ829260_p50 | major tail protein | phrog_476 | major tail protein | tail | 1 | 24164 | 24979 |
| AII28259.1 | KJ829260_p20 | hypothetical protein | phrog_11004 | unknown function | unknown function | 1 | 7877 | 8107 |
| AII28344.1 | KJ829260_p105 | hypothetical protein | phrog_11675 | unknown function | unknown function | -1 | 63263 | 63667 |
| AII28321.1 | KJ829260_p82 | hypothetical protein | phrog_14583 | unknown function | unknown function | -1 | 49288 | 49998 |
| AII28335.1 | KJ829260_p96 | hypothetical protein | phrog_11021 | unknown function | unknown function | -1 | 58236 | 59036 |
| AII28285.1 | KJ829260_p46 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 22644 | 23003 |
| AII28324.1 | KJ829260_p85 | hypothetical protein | phrog_11268 | unknown function | unknown function | -1 | 51312 | 51944 |
| AII28341.1 | KJ829260_p102 | hypothetical protein | phrog_11545 | unknown function | unknown function | -1 | 62358 | 62537 |
| AII28336.1 | KJ829260_p97 | AAA ATPase | phrog_8638 | unknown function | unknown function | -1 | 59128 | 60828 |
| AII28315.1 | KJ829260_p76 | hypothetical protein | phrog_5552 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 46994 | 47491 |
| AII28278.1 | KJ829260_p39 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 18779 | 19399 |
| AII28269.1 | KJ829260_p30 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12329 | 12658 |
| AII28327.1 | KJ829260_p88 | Ku-like protein | phrog_4873 | Ku-like DNA end binding | DNA, RNA and nucleotide metabolism | -1 | 53599 | 54453 |
| AII28322.1 | KJ829260_p83 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 50045 | 50476 |
| AII28295.1 | KJ829260_p55 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 26055 | 27006 |
| AII28355.1 | KJ829260_p116 | hypothetical protein | phrog_11387 | unknown function | unknown function | -1 | 66614 | 66793 |
| AII28354.1 | KJ829260_p115 | hypothetical protein | phrog_11514 | unknown function | unknown function | -1 | 66417 | 66614 |
| AII28347.1 | KJ829260_p108 | hypothetical protein | phrog_11340 | unknown function | unknown function | -1 | 64299 | 64631 |
| AII28243.1 | KJ829260_p4 | hypothetical protein | phrog_10119 | unknown function | unknown function | -1 | 969 | 1109 |
| AII28253.1 | KJ829260_p14 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5302 | 6051 |
| AII28291.1 | KJ829260_p52 | hypothetical protein | phrog_2906 | unknown function | unknown function | -1 | 25168 | 25344 |
| AII28280.1 | KJ829260_p41 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 20130 | 20267 |
| AII28360.1 | KJ829260_p121 | hypothetical protein | phrog_15054 | unknown function | unknown function | -1 | 67961 | 68197 |
| AII28298.1 | KJ829260_p59 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 32618 | 34369 |
| AII28304.1 | KJ829260_p65 | minor tail protein | phrog_644 | unknown function | unknown function | 1 | 41553 | 41954 |
| AII28320.1 | KJ829260_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49034 | 49264 |
| AII28266.1 | KJ829260_p27 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 11595 | 12029 |
| AII28283.1 | KJ829260_p44 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 21885 | 22490 |
| AII28332.1 | KJ829260_p93 | hypothetical protein | phrog_11147 | unknown function | unknown function | -1 | 57081 | 57530 |
| AII28268.1 | KJ829260_p29 | hypothetical protein | phrog_21282 | unknown function | unknown function | 1 | 12255 | 12332 |
| AII28251.1 | KJ829260_p12 | hypothetical protein | phrog_11799 | unknown function | unknown function | -1 | 3788 | 4522 |
| AII28267.1 | KJ829260_p28 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 12026 | 12262 |
| AII28331.1 | KJ829260_p92 | hypothetical protein | phrog_10921 | unknown function | unknown function | -1 | 56699 | 57037 |
| AII28262.1 | KJ829260_p23 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 10657 | 10863 |
| AII28312.1 | KJ829260_p73 | holin | phrog_11087 | holin | lysis | 1 | 45924 | 46220 |
| AII28346.1 | KJ829260_p107 | hypothetical protein | phrog_13095 | unknown function | unknown function | -1 | 64087 | 64302 |
| AII28271.1 | KJ829260_p32 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 13159 | 13449 |