functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
KM091442 |
Definition |
Lactococcus phage phi15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31945 |
Host Name |
Lactococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
34.57 |
Number of singletons |
2 |
Number of paralogs |
3 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
AIK68562.1 | KM091442_p28 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 20527 | 20697 |
AIK68547.1 | KM091442_p13 | major capsid protein | phrog_1433 | major tail protein | tail | 1 | 10062 | 10967 |
AIK68582.1 | KM091442_p48 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 27910 | 28173 |
AIK68568.1 | KM091442_p34 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22061 | 22180 |
AIK68536.1 | KM091442_p2 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 753 | 1214 |
AIK68574.1 | KM091442_p40 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 24703 | 25212 |
AIK68571.1 | KM091442_p37 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23917 | 24339 |
AIK68558.1 | KM091442_p24 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 19104 | 19631 |
AIK68541.1 | KM091442_p7 | minor structural protein | phrog_1393 | minor head protein | head and packaging | 1 | 4771 | 5952 |
AIK68538.1 | KM091442_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2828 | 3112 |
AIK68572.1 | KM091442_p38 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 24340 | 24450 |
AIK68565.1 | KM091442_p31 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 21165 | 21410 |
AIK68551.1 | KM091442_p17 | structural protein | phrog_1424 | tail protein | tail | 1 | 14323 | 15219 |
AIK68543.1 | KM091442_p9 | structural protein | phrog_1429 | virion structural protein | head and packaging | 1 | 6236 | 6550 |
AIK68560.1 | KM091442_p26 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 20007 | 20108 |
AIK68544.1 | KM091442_p10 | structural protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6547 | 6888 |
AIK68579.1 | KM091442_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26851 | 26976 |
AIK68559.1 | KM091442_p25 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19741 | 20010 |
AIK68575.1 | KM091442_p41 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 25209 | 25424 |
AIK68563.1 | KM091442_p29 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 20697 | 20873 |
AIK68567.1 | KM091442_p33 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21753 | 22061 |
AIK68539.1 | KM091442_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3125 | 4261 |
AIK68555.1 | KM091442_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17402 | 17755 |
AIK68569.1 | KM091442_p35 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | -1 | 22186 | 22848 |
AIK68540.1 | KM091442_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4242 | 4778 |
AIK68556.1 | KM091442_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17752 | 18528 |
AIK68588.1 | KM091442_p54 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30921 | 31400 |
AIK68545.1 | KM091442_p11 | structural protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6879 | 7244 |
AIK68589.1 | KM091442_p55 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 31401 | 31562 |
AIK68554.1 | KM091442_p20 | receptor-binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16619 | 17380 |
AIK68583.1 | KM091442_p49 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 28166 | 29116 |
AIK68542.1 | KM091442_p8 | structural protein | phrog_1428 | head-tail connector protein | connector | 1 | 5973 | 6236 |
AIK68576.1 | KM091442_p42 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25437 | 25703 |
AIK68549.1 | KM091442_p15 | structural protein | phrog_1421 | virion structural protein | head and packaging | 1 | 11301 | 11813 |
AIK68548.1 | KM091442_p14 | structural protein | phrog_1420 | virion structural protein | head and packaging | 1 | 11006 | 11281 |
AIK68550.1 | KM091442_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11813 | 14323 |
AIK68557.1 | KM091442_p23 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 18710 | 19075 |
AIK68584.1 | KM091442_p50 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 29843 | 29971 |
AIK68577.1 | KM091442_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25802 | 26128 |
AIK68546.1 | KM091442_p12 | neck passage structure protein | phrog_7918 | neck passage structure protein | connector | 1 | 7302 | 9890 |
AIK68585.1 | KM091442_p51 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 30341 | 30529 |
AIK68537.1 | KM091442_p3 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1225 | 2838 |
AIK68566.1 | KM091442_p32 | hypothetical protein | phrog_20985 | unknown function | unknown function | -1 | 21407 | 21673 |
AIK68580.1 | KM091442_p46 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 26963 | 27349 |
AIK68553.1 | KM091442_p19 | structural protein | phrog_1434 | unknown function | unknown function | 1 | 16336 | 16629 |
AIK68564.1 | KM091442_p30 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20866 | 21102 |
AIK68570.1 | KM091442_p36 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 22904 | 23806 |
AIK68578.1 | KM091442_p44 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26364 | 26864 |
AIK68587.1 | KM091442_p53 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 30793 | 30924 |
AIK68573.1 | KM091442_p39 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 24447 | 24620 |
AIK68552.1 | KM091442_p18 | structural protein | phrog_1432 | tail associated lysin | tail | 1 | 15219 | 16346 |
AIK68561.1 | KM091442_p27 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 20183 | 20530 |
AIK68535.1 | KM091442_p1 | small terminase | phrog_1437 | terminase small subunit | head and packaging | 1 | 232 | 756 |
AIK68586.1 | KM091442_p52 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 30660 | 30788 |
AIK68581.1 | KM091442_p47 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 27473 | 27859 |