Genomic map of Lactococcus phage phi93 (KM091443)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM091443
Definition
Lactococcus phage phi93, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
31841
Host Name
Lactococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
34.97
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIK68628.1 KM091443_p39 hypothetical protein phrog_56 DNA methyltransferase other -1 23119 24132
AIK68592.1 KM091443_p3 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 1684 2247
AIK68626.1 KM091443_p37 hypothetical protein phrog_1225 unknown function unknown function -1 22636 22941
AIK68601.1 KM091443_p12 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 8133 8630
AIK68604.1 KM091443_p15 major capsid protein phrog_1433 major tail protein tail 1 9327 10232
AIK68635.1 KM091443_p46 hypothetical protein phrog_2228 unknown function unknown function -1 26704 27093
AIK68606.1 KM091443_p17 structural protein phrog_1420 virion structural protein head and packaging 1 10877 11152
AIK68627.1 KM091443_p38 hypothetical protein phrog_1508 unknown function unknown function -1 22942 23061
AIK68611.1 KM091443_p22 structural protein phrog_1434 unknown function unknown function 1 17275 17568
AIK68640.1 KM091443_p51 hypothetical protein phrog_1656 unknown function unknown function -1 29640 29828
AIK68609.1 KM091443_p20 structural protein phrog_1424 tail protein tail 1 14683 16158
AIK68629.1 KM091443_p40 hypothetical protein phrog_1825 DNA methyltransferase other -1 24125 24373
AIK68630.1 KM091443_p41 hypothetical protein phrog_1317 unknown function unknown function -1 24452 24961
AIK68632.1 KM091443_p43 single-stranded DNA binding protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25186 25545
AIK68599.1 KM091443_p10 structural protein phrog_1428 head-tail connector protein connector 1 7559 7822
AIK68616.1 KM091443_p27 hypothetical protein phrog_5087 unknown function unknown function -1 19696 19953
AIK68617.1 KM091443_p28 hypothetical protein phrog_5152 unknown function unknown function -1 19985 20233
AIK68590.1 KM091443_p1 small terminase phrog_1437 terminase small subunit head and packaging 1 260 784
AIK68591.1 KM091443_p2 DNA methylase phrog_67 DNA methyltransferase other 1 781 1629
AIK68619.1 KM091443_p30 hypothetical protein phrog_10611 unknown function unknown function -1 20521 20670
AIK68642.1 KM091443_p53 middle expressed protein 2 phrog_1436 unknown function unknown function 1 30091 30222
AIK68595.1 KM091443_p6 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4414 4698
AIK68610.1 KM091443_p21 structural protein phrog_1432 tail associated lysin tail 1 16158 17285
AIK68618.1 KM091443_p29 hypothetical protein phrog_1430 unknown function unknown function -1 20254 20520
AIK68615.1 KM091443_p26 hypothetical protein phrog_3775 transglycosylase other -1 19490 19654
AIK68634.1 KM091443_p45 hypothetical protein phrog_1449 unknown function unknown function -1 26197 26610
AIK68621.1 KM091443_p32 hypothetical protein phrog_1415 unknown function unknown function -1 20844 21191
AIK68641.1 KM091443_p52 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29958 30086
AIK68600.1 KM091443_p11 structural protein phrog_1429 virion structural protein head and packaging 1 7822 8136
AIK68612.1 KM091443_p23 receptor-binding protein phrog_1630 receptor binding tail protein tail 1 17558 18364
AIK68620.1 KM091443_p31 hypothetical protein phrog_8962 unknown function unknown function -1 20671 20769
AIK68602.1 KM091443_p13 structural protein phrog_1484 virion structural protein head and packaging 1 8620 8958
AIK68608.1 KM091443_p19 tape measure protein phrog_58 tail length tape measure protein tail 1 11684 14683
AIK68593.1 KM091443_p4 DNA methylase phrog_111 DNA methyltransferase other 1 2368 2790
AIK68638.1 KM091443_p49 hypothetical protein phrog_2541 unknown function unknown function -1 28444 28671
AIK68639.1 KM091443_p50 hypothetical protein phrog_2413 unknown function unknown function -1 29166 29285
AIK68597.1 KM091443_p8 protease protein phrog_80 head maturation protease head and packaging 1 5828 6364
AIK68644.1 KM091443_p55 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30859 31026
AIK68613.1 KM091443_p24 holin phrog_1379 unknown function unknown function 1 18378 18731
AIK68614.1 KM091443_p25 lysin phrog_670 endolysin lysis 1 18728 19444
AIK68596.1 KM091443_p7 portal protein phrog_12 portal protein head and packaging 1 4711 5847
AIK68631.1 KM091443_p42 hypothetical protein phrog_1295 unknown function unknown function -1 24958 25173
AIK68643.1 KM091443_p54 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30219 30701
AIK68636.1 KM091443_p47 hypothetical protein phrog_1405 unknown function unknown function -1 27150 27407
AIK68624.1 KM091443_p35 hypothetical protein phrog_1509 unknown function unknown function -1 21770 22027
AIK68607.1 KM091443_p18 structural protein phrog_1421 virion structural protein head and packaging 1 11172 11684
AIK68594.1 KM091443_p5 larger terminase phrog_9 terminase large subunit head and packaging 1 2820 4424
AIK68622.1 KM091443_p33 hypothetical protein phrog_1441 unknown function unknown function -1 21191 21424
AIK68637.1 KM091443_p48 hypothetical protein phrog_1284 unknown function unknown function -1 27400 28419
AIK68625.1 KM091443_p36 hypothetical protein phrog_3530 unknown function unknown function -1 22203 22664
AIK68598.1 KM091443_p9 minor structural protein phrog_1393 minor head protein head and packaging 1 6357 7538
AIK68633.1 KM091443_p44 SAK kinase phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25549 26103
AIK68605.1 KM091443_p16 structural protein phrog_5983 tail protein tail 1 10318 10857
AIK68623.1 KM091443_p34 hypothetical protein phrog_2530 unknown function unknown function -1 21536 21727
AIK68603.1 KM091443_p14 structural protein phrog_1440 virion structural protein head and packaging 1 8949 9314