| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KM091443 |
Definition |
Lactococcus phage phi93, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31841 |
Host Name |
Lactococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
34.97 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AIK68628.1 | KM091443_p39 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 23119 | 24132 |
| AIK68592.1 | KM091443_p3 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 1684 | 2247 |
| AIK68626.1 | KM091443_p37 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 22636 | 22941 |
| AIK68601.1 | KM091443_p12 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8133 | 8630 |
| AIK68604.1 | KM091443_p15 | major capsid protein | phrog_1433 | major tail protein | tail | 1 | 9327 | 10232 |
| AIK68635.1 | KM091443_p46 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26704 | 27093 |
| AIK68606.1 | KM091443_p17 | structural protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10877 | 11152 |
| AIK68627.1 | KM091443_p38 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22942 | 23061 |
| AIK68611.1 | KM091443_p22 | structural protein | phrog_1434 | unknown function | unknown function | 1 | 17275 | 17568 |
| AIK68640.1 | KM091443_p51 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29640 | 29828 |
| AIK68609.1 | KM091443_p20 | structural protein | phrog_1424 | tail protein | tail | 1 | 14683 | 16158 |
| AIK68629.1 | KM091443_p40 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 24125 | 24373 |
| AIK68630.1 | KM091443_p41 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 24452 | 24961 |
| AIK68632.1 | KM091443_p43 | single-stranded DNA binding protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25186 | 25545 |
| AIK68599.1 | KM091443_p10 | structural protein | phrog_1428 | head-tail connector protein | connector | 1 | 7559 | 7822 |
| AIK68616.1 | KM091443_p27 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 19696 | 19953 |
| AIK68617.1 | KM091443_p28 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 19985 | 20233 |
| AIK68590.1 | KM091443_p1 | small terminase | phrog_1437 | terminase small subunit | head and packaging | 1 | 260 | 784 |
| AIK68591.1 | KM091443_p2 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 781 | 1629 |
| AIK68619.1 | KM091443_p30 | hypothetical protein | phrog_10611 | unknown function | unknown function | -1 | 20521 | 20670 |
| AIK68642.1 | KM091443_p53 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 30091 | 30222 |
| AIK68595.1 | KM091443_p6 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4414 | 4698 |
| AIK68610.1 | KM091443_p21 | structural protein | phrog_1432 | tail associated lysin | tail | 1 | 16158 | 17285 |
| AIK68618.1 | KM091443_p29 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 20254 | 20520 |
| AIK68615.1 | KM091443_p26 | hypothetical protein | phrog_3775 | transglycosylase | other | -1 | 19490 | 19654 |
| AIK68634.1 | KM091443_p45 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 26197 | 26610 |
| AIK68621.1 | KM091443_p32 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 20844 | 21191 |
| AIK68641.1 | KM091443_p52 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 29958 | 30086 |
| AIK68600.1 | KM091443_p11 | structural protein | phrog_1429 | virion structural protein | head and packaging | 1 | 7822 | 8136 |
| AIK68612.1 | KM091443_p23 | receptor-binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 17558 | 18364 |
| AIK68620.1 | KM091443_p31 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 20671 | 20769 |
| AIK68602.1 | KM091443_p13 | structural protein | phrog_1484 | virion structural protein | head and packaging | 1 | 8620 | 8958 |
| AIK68608.1 | KM091443_p19 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11684 | 14683 |
| AIK68593.1 | KM091443_p4 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 2368 | 2790 |
| AIK68638.1 | KM091443_p49 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 28444 | 28671 |
| AIK68639.1 | KM091443_p50 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 29166 | 29285 |
| AIK68597.1 | KM091443_p8 | protease protein | phrog_80 | head maturation protease | head and packaging | 1 | 5828 | 6364 |
| AIK68644.1 | KM091443_p55 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 30859 | 31026 |
| AIK68613.1 | KM091443_p24 | holin | phrog_1379 | unknown function | unknown function | 1 | 18378 | 18731 |
| AIK68614.1 | KM091443_p25 | lysin | phrog_670 | endolysin | lysis | 1 | 18728 | 19444 |
| AIK68596.1 | KM091443_p7 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4711 | 5847 |
| AIK68631.1 | KM091443_p42 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 24958 | 25173 |
| AIK68643.1 | KM091443_p54 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30219 | 30701 |
| AIK68636.1 | KM091443_p47 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 27150 | 27407 |
| AIK68624.1 | KM091443_p35 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 21770 | 22027 |
| AIK68607.1 | KM091443_p18 | structural protein | phrog_1421 | virion structural protein | head and packaging | 1 | 11172 | 11684 |
| AIK68594.1 | KM091443_p5 | larger terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 2820 | 4424 |
| AIK68622.1 | KM091443_p33 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 21191 | 21424 |
| AIK68637.1 | KM091443_p48 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 27400 | 28419 |
| AIK68625.1 | KM091443_p36 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 22203 | 22664 |
| AIK68598.1 | KM091443_p9 | minor structural protein | phrog_1393 | minor head protein | head and packaging | 1 | 6357 | 7538 |
| AIK68633.1 | KM091443_p44 | SAK kinase | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25549 | 26103 |
| AIK68605.1 | KM091443_p16 | structural protein | phrog_5983 | tail protein | tail | 1 | 10318 | 10857 |
| AIK68623.1 | KM091443_p34 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 21536 | 21727 |
| AIK68603.1 | KM091443_p14 | structural protein | phrog_1440 | virion structural protein | head and packaging | 1 | 8949 | 9314 |