| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KM101117 |
Definition |
Mycobacterium phage LizLemon, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; Mycobacterium virus Rosebush. |
DB of origin |
PVOG |
Length |
67496 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
68.94 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AIK68795.1 | KM101117_p21 | major tail subunit | phrog_792 | major tail protein | tail | 1 | 17696 | 18772 |
| AIK68845.1 | KM101117_p71 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 59062 | 59166 |
| AIK68786.1 | KM101117_p12 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 7845 | 9734 |
| AIK68810.1 | KM101117_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34803 | 35447 |
| AIK68822.1 | KM101117_p48 | hypothetical protein | phrog_526 | holin | lysis | 1 | 42422 | 42955 |
| AIK68860.1 | KM101117_p86 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 64989 | 65282 |
| AIK68782.1 | KM101117_p8 | hypothetical protein | phrog_5935 | unknown function | unknown function | -1 | 6038 | 6508 |
| AIK68858.1 | KM101117_p84 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 63237 | 63833 |
| AIK68802.1 | KM101117_p28 | hypothetical protein | phrog_6941 | unknown function | unknown function | 1 | 21437 | 21922 |
| AIK68801.1 | KM101117_p27 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20954 | 21382 |
| AIK68866.1 | KM101117_p92 | hypothetical protein | phrog_7435 | unknown function | unknown function | -1 | 66577 | 67332 |
| AIK68803.1 | KM101117_p29 | tapemeasure protein | phrog_934 | tail length tape measure protein | tail | 1 | 21948 | 27593 |
| AIK68792.1 | KM101117_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 16256 | 16798 |
| AIK68855.1 | KM101117_p81 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 62136 | 62348 |
| AIK68824.1 | KM101117_p50 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43612 | 44979 |
| AIK68863.1 | KM101117_p89 | hypothetical protein | phrog_7256 | unknown function | unknown function | -1 | 65596 | 65928 |
| AIK68826.1 | KM101117_p52 | hypothetical protein | phrog_7912 | unknown function | unknown function | -1 | 46762 | 46923 |
| AIK68846.1 | KM101117_p72 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 59163 | 59387 |
| AIK68841.1 | KM101117_p67 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 56875 | 57408 |
| AIK68852.1 | KM101117_p78 | hypothetical protein | phrog_7525 | unknown function | unknown function | -1 | 61193 | 61510 |
| AIK68850.1 | KM101117_p76 | hypothetical protein | phrog_7367 | unknown function | unknown function | -1 | 60476 | 60787 |
| AIK68856.1 | KM101117_p82 | hypothetical protein | phrog_6719 | unknown function | unknown function | -1 | 62345 | 62839 |
| AIK68821.1 | KM101117_p47 | lysin A | phrog_317 | endolysin | lysis | 1 | 40923 | 42422 |
| AIK68865.1 | KM101117_p91 | hypothetical protein | phrog_6718 | unknown function | unknown function | -1 | 66290 | 66481 |
| AIK68812.1 | KM101117_p38 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35593 | 36192 |
| AIK68805.1 | KM101117_p31 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 29041 | 30090 |
| AIK68829.1 | KM101117_p55 | primase/helicase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47816 | 50569 |
| AIK68783.1 | KM101117_p9 | RuvC holliday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6591 | 7166 |
| AIK68791.1 | KM101117_p17 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 15470 | 16219 |
| AIK68838.1 | KM101117_p64 | hypothetical protein | phrog_1016 | unknown function | unknown function | 1 | 55590 | 55850 |
| AIK68781.1 | KM101117_p7 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 4347 | 6041 |
| AIK68800.1 | KM101117_p26 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 20598 | 20954 |
| AIK68815.1 | KM101117_p41 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37850 | 38215 |
| AIK68844.1 | KM101117_p70 | hypothetical protein | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 58773 | 59075 |
| AIK68796.1 | KM101117_p22 | hypothetical protein | phrog_7051 | unknown function | unknown function | -1 | 18832 | 18945 |
| AIK68806.1 | KM101117_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 30087 | 32807 |
| AIK68847.1 | KM101117_p73 | hypothetical protein | phrog_7876 | unknown function | unknown function | -1 | 59384 | 59899 |
| AIK68864.1 | KM101117_p90 | hypothetical protein | phrog_9162 | unknown function | unknown function | -1 | 65925 | 66287 |
| AIK68813.1 | KM101117_p39 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 36189 | 37502 |
| AIK68823.1 | KM101117_p49 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 43073 | 43597 |
| AIK68807.1 | KM101117_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32810 | 33973 |
| AIK68854.1 | KM101117_p80 | hypothetical protein | phrog_8500 | unknown function | unknown function | -1 | 61973 | 62134 |
| AIK68833.1 | KM101117_p59 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 52984 | 53475 |
| AIK68776.1 | KM101117_p2 | hypothetical protein | phrog_7068 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 789 | 1946 |
| AIK68816.1 | KM101117_p42 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 38241 | 38657 |
| AIK68827.1 | KM101117_p53 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 46925 | 47260 |
| AIK68778.1 | KM101117_p4 | QueD domain protein | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | 1 | 2647 | 3078 |
| AIK68790.1 | KM101117_p16 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 14652 | 15470 |
| AIK68804.1 | KM101117_p30 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 27602 | 29038 |
| AIK68798.1 | KM101117_p24 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 19247 | 20032 |
| AIK68848.1 | KM101117_p74 | hypothetical protein | phrog_8177 | unknown function | unknown function | -1 | 59893 | 60171 |
| AIK68819.1 | KM101117_p45 | HTH DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39587 | 39976 |
| AIK68811.1 | KM101117_p37 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 35444 | 35596 |
| AIK68793.1 | KM101117_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 16795 | 17277 |
| AIK68851.1 | KM101117_p77 | hypothetical protein | phrog_8341 | unknown function | unknown function | -1 | 60850 | 61095 |
| AIK68828.1 | KM101117_p54 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47260 | 47751 |
| AIK68780.1 | KM101117_p6 | GTP cyclohydrolase | phrog_2197 | GTP cyclohydrolase | other | 1 | 3788 | 4363 |
| AIK68777.1 | KM101117_p3 | QueC domain protein | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 1943 | 2650 |
| AIK68797.1 | KM101117_p23 | hypothetical protein | phrog_1318 | unknown function | unknown function | -1 | 18945 | 19136 |
| AIK68839.1 | KM101117_p65 | hypothetical protein | phrog_7544 | unknown function | unknown function | 1 | 55882 | 56223 |
| AIK68820.1 | KM101117_p46 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 40051 | 40815 |
| AIK68842.1 | KM101117_p68 | hypothetical protein | phrog_7186 | unknown function | unknown function | 1 | 57449 | 57832 |
| AIK68809.1 | KM101117_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 34402 | 34791 |
| AIK68834.1 | KM101117_p60 | hypothetical protein | phrog_3835 | unknown function | unknown function | -1 | 53472 | 53942 |
| AIK68788.1 | KM101117_p14 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 12181 | 12354 |
| AIK68808.1 | KM101117_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 34004 | 34393 |
| AIK68832.1 | KM101117_p58 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 52607 | 52987 |
| AIK68817.1 | KM101117_p43 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 38658 | 39353 |
| AIK68862.1 | KM101117_p88 | hypothetical protein | phrog_8227 | unknown function | unknown function | -1 | 65462 | 65599 |
| AIK68785.1 | KM101117_p11 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 7480 | 7818 |
| AIK68775.1 | KM101117_p1 | hypothetical protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 792 |
| AIK68794.1 | KM101117_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 17274 | 17606 |
| AIK68818.1 | KM101117_p44 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39350 | 39556 |
| AIK68835.1 | KM101117_p61 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 54203 | 54505 |
| AIK68836.1 | KM101117_p62 | hypothetical protein | phrog_8754 | unknown function | unknown function | 1 | 54623 | 54892 |
| AIK68861.1 | KM101117_p87 | hypothetical protein | phrog_7689 | unknown function | unknown function | -1 | 65319 | 65465 |
| AIK68830.1 | KM101117_p56 | hypothetical protein | phrog_2526 | unknown function | unknown function | -1 | 50614 | 50778 |
| AIK68814.1 | KM101117_p40 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 37533 | 37889 |
| AIK68857.1 | KM101117_p83 | hypothetical protein | phrog_7394 | unknown function | unknown function | -1 | 62906 | 63127 |
| AIK68779.1 | KM101117_p5 | QueE domain protein | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | 1 | 3075 | 3788 |
| AIK68799.1 | KM101117_p25 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 20029 | 20589 |
| AIK68843.1 | KM101117_p69 | hypothetical protein | phrog_928 | unknown function | unknown function | 1 | 57829 | 58542 |
| AIK68787.1 | KM101117_p13 | hypothetical protein | phrog_859 | portal protein | head and packaging | 1 | 9734 | 12181 |
| AIK68825.1 | KM101117_p51 | hypothetical protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44976 | 46691 |
| AIK68784.1 | KM101117_p10 | hypothetical protein | phrog_7710 | unknown function | unknown function | 1 | 7163 | 7483 |
| AIK68837.1 | KM101117_p63 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 54879 | 55580 |
| AIK68840.1 | KM101117_p66 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 56220 | 56873 |
| AIK68859.1 | KM101117_p85 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 63844 | 64914 |
| AIK68853.1 | KM101117_p79 | hypothetical protein | phrog_7479 | unknown function | unknown function | -1 | 61558 | 61983 |
| AIK68831.1 | KM101117_p57 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50781 | 52610 |
| AIK68789.1 | KM101117_p15 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 12528 | 14558 |
| AIK68849.1 | KM101117_p75 | hypothetical protein | phrog_7463 | unknown function | unknown function | -1 | 60168 | 60479 |