Genomic map of Mycobacterium phage LizLemon (KM101117)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM101117
Definition
Mycobacterium phage LizLemon, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; Mycobacterium virus Rosebush.
DB of origin
PVOG
Length
67496
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
68.94
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIK68795.1 KM101117_p21 major tail subunit phrog_792 major tail protein tail 1 17696 18772
AIK68845.1 KM101117_p71 hypothetical protein phrog_4461 unknown function unknown function -1 59062 59166
AIK68786.1 KM101117_p12 hypothetical protein phrog_776 portal protein head and packaging 1 7845 9734
AIK68810.1 KM101117_p36 hypothetical protein phrog_282 unknown function unknown function 1 34803 35447
AIK68822.1 KM101117_p48 hypothetical protein phrog_526 holin lysis 1 42422 42955
AIK68860.1 KM101117_p86 hypothetical protein phrog_2972 unknown function unknown function -1 64989 65282
AIK68782.1 KM101117_p8 hypothetical protein phrog_5935 unknown function unknown function -1 6038 6508
AIK68858.1 KM101117_p84 hypothetical protein phrog_1010 unknown function unknown function -1 63237 63833
AIK68802.1 KM101117_p28 hypothetical protein phrog_6941 unknown function unknown function 1 21437 21922
AIK68801.1 KM101117_p27 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 20954 21382
AIK68866.1 KM101117_p92 hypothetical protein phrog_7435 unknown function unknown function -1 66577 67332
AIK68803.1 KM101117_p29 tapemeasure protein phrog_934 tail length tape measure protein tail 1 21948 27593
AIK68792.1 KM101117_p18 hypothetical protein phrog_2272 unknown function unknown function 1 16256 16798
AIK68855.1 KM101117_p81 hypothetical protein phrog_1933 unknown function unknown function -1 62136 62348
AIK68824.1 KM101117_p50 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43612 44979
AIK68863.1 KM101117_p89 hypothetical protein phrog_7256 unknown function unknown function -1 65596 65928
AIK68826.1 KM101117_p52 hypothetical protein phrog_7912 unknown function unknown function -1 46762 46923
AIK68846.1 KM101117_p72 hypothetical protein phrog_2089 unknown function unknown function -1 59163 59387
AIK68841.1 KM101117_p67 hypothetical protein phrog_1031 unknown function unknown function 1 56875 57408
AIK68852.1 KM101117_p78 hypothetical protein phrog_7525 unknown function unknown function -1 61193 61510
AIK68850.1 KM101117_p76 hypothetical protein phrog_7367 unknown function unknown function -1 60476 60787
AIK68856.1 KM101117_p82 hypothetical protein phrog_6719 unknown function unknown function -1 62345 62839
AIK68821.1 KM101117_p47 lysin A phrog_317 endolysin lysis 1 40923 42422
AIK68865.1 KM101117_p91 hypothetical protein phrog_6718 unknown function unknown function -1 66290 66481
AIK68812.1 KM101117_p38 hypothetical protein phrog_282 unknown function unknown function 1 35593 36192
AIK68805.1 KM101117_p31 minor tail protein phrog_837 minor tail protein tail 1 29041 30090
AIK68829.1 KM101117_p55 primase/helicase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 47816 50569
AIK68783.1 KM101117_p9 RuvC holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6591 7166
AIK68791.1 KM101117_p17 hypothetical protein phrog_970 unknown function unknown function 1 15470 16219
AIK68838.1 KM101117_p64 hypothetical protein phrog_1016 unknown function unknown function 1 55590 55850
AIK68781.1 KM101117_p7 terminase phrog_38 terminase large subunit head and packaging 1 4347 6041
AIK68800.1 KM101117_p26 hypothetical protein phrog_901 unknown function unknown function 1 20598 20954
AIK68815.1 KM101117_p41 hypothetical protein phrog_941 unknown function unknown function 1 37850 38215
AIK68844.1 KM101117_p70 hypothetical protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 58773 59075
AIK68796.1 KM101117_p22 hypothetical protein phrog_7051 unknown function unknown function -1 18832 18945
AIK68806.1 KM101117_p32 minor tail protein phrog_346 minor tail protein tail 1 30087 32807
AIK68847.1 KM101117_p73 hypothetical protein phrog_7876 unknown function unknown function -1 59384 59899
AIK68864.1 KM101117_p90 hypothetical protein phrog_9162 unknown function unknown function -1 65925 66287
AIK68813.1 KM101117_p39 hypothetical protein phrog_3329 unknown function unknown function 1 36189 37502
AIK68823.1 KM101117_p49 hypothetical protein phrog_870 unknown function unknown function -1 43073 43597
AIK68807.1 KM101117_p33 minor tail protein phrog_416 minor tail protein tail 1 32810 33973
AIK68854.1 KM101117_p80 hypothetical protein phrog_8500 unknown function unknown function -1 61973 62134
AIK68833.1 KM101117_p59 hypothetical protein phrog_993 unknown function unknown function -1 52984 53475
AIK68776.1 KM101117_p2 hypothetical protein phrog_7068 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 789 1946
AIK68816.1 KM101117_p42 hypothetical protein phrog_892 tail fiber protein tail 1 38241 38657
AIK68827.1 KM101117_p53 hypothetical protein phrog_3892 unknown function unknown function -1 46925 47260
AIK68778.1 KM101117_p4 QueD domain protein phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 2647 3078
AIK68790.1 KM101117_p16 hypothetical protein phrog_779 unknown function unknown function 1 14652 15470
AIK68804.1 KM101117_p30 minor tail protein phrog_838 unknown function unknown function 1 27602 29038
AIK68798.1 KM101117_p24 hypothetical protein phrog_783 head-tail adaptor connector 1 19247 20032
AIK68848.1 KM101117_p74 hypothetical protein phrog_8177 unknown function unknown function -1 59893 60171
AIK68819.1 KM101117_p45 HTH DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39587 39976
AIK68811.1 KM101117_p37 hypothetical protein phrog_8248 unknown function unknown function 1 35444 35596
AIK68793.1 KM101117_p19 hypothetical protein phrog_2344 unknown function unknown function 1 16795 17277
AIK68851.1 KM101117_p77 hypothetical protein phrog_8341 unknown function unknown function -1 60850 61095
AIK68828.1 KM101117_p54 hypothetical protein phrog_1371 unknown function unknown function -1 47260 47751
AIK68780.1 KM101117_p6 GTP cyclohydrolase phrog_2197 GTP cyclohydrolase other 1 3788 4363
AIK68777.1 KM101117_p3 QueC domain protein phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover 1 1943 2650
AIK68797.1 KM101117_p23 hypothetical protein phrog_1318 unknown function unknown function -1 18945 19136
AIK68839.1 KM101117_p65 hypothetical protein phrog_7544 unknown function unknown function 1 55882 56223
AIK68820.1 KM101117_p46 hypothetical protein phrog_636 unknown function unknown function -1 40051 40815
AIK68842.1 KM101117_p68 hypothetical protein phrog_7186 unknown function unknown function 1 57449 57832
AIK68809.1 KM101117_p35 hypothetical protein phrog_948 unknown function unknown function 1 34402 34791
AIK68834.1 KM101117_p60 hypothetical protein phrog_3835 unknown function unknown function -1 53472 53942
AIK68788.1 KM101117_p14 hypothetical protein phrog_2069 unknown function unknown function 1 12181 12354
AIK68808.1 KM101117_p34 hypothetical protein phrog_240 head protein head and packaging 1 34004 34393
AIK68832.1 KM101117_p58 hypothetical protein phrog_3025 unknown function unknown function -1 52607 52987
AIK68817.1 KM101117_p43 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38658 39353
AIK68862.1 KM101117_p88 hypothetical protein phrog_8227 unknown function unknown function -1 65462 65599
AIK68785.1 KM101117_p11 hypothetical protein phrog_781 unknown function unknown function 1 7480 7818
AIK68775.1 KM101117_p1 hypothetical protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 792
AIK68794.1 KM101117_p20 hypothetical protein phrog_2525 unknown function unknown function 1 17274 17606
AIK68818.1 KM101117_p44 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39350 39556
AIK68835.1 KM101117_p61 hypothetical protein phrog_982 unknown function unknown function -1 54203 54505
AIK68836.1 KM101117_p62 hypothetical protein phrog_8754 unknown function unknown function 1 54623 54892
AIK68861.1 KM101117_p87 hypothetical protein phrog_7689 unknown function unknown function -1 65319 65465
AIK68830.1 KM101117_p56 hypothetical protein phrog_2526 unknown function unknown function -1 50614 50778
AIK68814.1 KM101117_p40 hypothetical protein phrog_915 unknown function unknown function 1 37533 37889
AIK68857.1 KM101117_p83 hypothetical protein phrog_7394 unknown function unknown function -1 62906 63127
AIK68779.1 KM101117_p5 QueE domain protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 3075 3788
AIK68799.1 KM101117_p25 hypothetical protein phrog_810 unknown function unknown function 1 20029 20589
AIK68843.1 KM101117_p69 hypothetical protein phrog_928 unknown function unknown function 1 57829 58542
AIK68787.1 KM101117_p13 hypothetical protein phrog_859 portal protein head and packaging 1 9734 12181
AIK68825.1 KM101117_p51 hypothetical protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 44976 46691
AIK68784.1 KM101117_p10 hypothetical protein phrog_7710 unknown function unknown function 1 7163 7483
AIK68837.1 KM101117_p63 hypothetical protein phrog_996 unknown function unknown function 1 54879 55580
AIK68840.1 KM101117_p66 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 56220 56873
AIK68859.1 KM101117_p85 hypothetical protein phrog_1221 unknown function unknown function -1 63844 64914
AIK68853.1 KM101117_p79 hypothetical protein phrog_7479 unknown function unknown function -1 61558 61983
AIK68831.1 KM101117_p57 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50781 52610
AIK68789.1 KM101117_p15 major capsid protein phrog_777 major head protein head and packaging 1 12528 14558
AIK68849.1 KM101117_p75 hypothetical protein phrog_7463 unknown function unknown function -1 60168 60479