Genomic map of Vibrio phage ICP2_2011_A (KM224878)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM224878
Definition
Vibrio phage ICP2_2011_A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
PVOG
Length
50250
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
42.47
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AII27073.1 KM224878_p29 hypothetical protein phrog_14633 unknown function unknown function 1 27935 28165
AII27060.1 KM224878_p16 hypothetical protein phrog_267 major head protein head and packaging -1 14947 15918
AII27065.1 KM224878_p21 hypothetical protein phrog_8035 unknown function unknown function -1 20256 20759
AII27107.1 KM224878_p63 hypothetical protein phrog_19822 unknown function unknown function 1 45998 46240
AII27046.1 KM224878_p2 hypothetical protein phrog_16830 unknown function unknown function -1 542 871
AII27104.1 KM224878_p60 hypothetical protein phrog_25943 unknown function unknown function 1 44763 44894
AII27067.1 KM224878_p23 hypothetical protein phrog_10745 unknown function unknown function -1 21100 22149
AII27055.1 KM224878_p11 hypothetical protein phrog_7592 tail protein tail -1 10968 11762
AII27083.1 KM224878_p39 hypothetical protein phrog_18043 unknown function unknown function 1 32036 32212
AII27099.1 KM224878_p55 hypothetical protein phrog_19119 unknown function unknown function 1 42812 43054
AII27069.1 KM224878_p25 hypothetical protein phrog_17587 tail fiber protein tail -1 23312 25237
AII27085.1 KM224878_p41 hypothetical protein phrog_17276 aerobic cobaltochelatase CobT subunit moron, auxiliary metabolic gene and host takeover 1 32515 34257
AII27111.1 KM224878_p67 ribonucleotide reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 47499 49361
AII27080.1 KM224878_p36 hypothetical protein phrog_1965 unknown function unknown function 1 30198 30791
AII27072.1 KM224878_p28 hypothetical protein phrog_21943 unknown function unknown function 1 27807 27938
AII27113.1 KM224878_p69 hypothetical protein phrog_21384 unknown function unknown function 1 49690 50001
AII27053.1 KM224878_p9 hypothetical protein phrog_8094 tail appendage tail -1 8572 10776
AII27070.1 KM224878_p26 hypothetical protein phrog_15513 unknown function unknown function 1 26982 27224
AII27071.1 KM224878_p27 hypothetical protein phrog_14737 unknown function unknown function 1 27242 27733
AII27051.1 KM224878_p7 hypothetical protein phrog_8168 unknown function unknown function -1 7675 8121
AII27112.1 KM224878_p68 hypothetical protein phrog_11040 unknown function unknown function 1 49472 49690
AII27050.1 KM224878_p6 hypothetical protein phrog_12003 internal virion protein head and packaging -1 3408 7658
AII27108.1 KM224878_p64 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 46237 46575
AII27074.1 KM224878_p30 hypothetical protein phrog_22803 unknown function unknown function 1 28242 28445
AII27087.1 KM224878_p43 hypothetical protein phrog_17083 unknown function unknown function 1 35398 35700
AII27086.1 KM224878_p42 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 34273 35388
AII27081.1 KM224878_p37 hypothetical protein phrog_17353 unknown function unknown function 1 30795 31163
AII27109.1 KM224878_p65 thymidine kinase phrog_592 thymidine kinase other 1 46575 47171
AII27062.1 KM224878_p18 hypothetical protein phrog_8956 unknown function unknown function -1 16742 16981
AII27110.1 KM224878_p66 hypothetical protein phrog_20277 unknown function unknown function 1 47168 47380
AII27054.1 KM224878_p10 hypothetical protein phrog_9082 unknown function unknown function -1 10757 10957
AII27093.1 KM224878_p49 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 38015 39271
AII27089.1 KM224878_p45 hypothetical protein phrog_19971 unknown function unknown function 1 36001 36291
AII27056.1 KM224878_p12 hypothetical protein phrog_4590 unknown function unknown function -1 11762 12049
AII27045.1 KM224878_p1 hypothetical protein phrog_2452 unknown function unknown function 1 169 465
AII27052.1 KM224878_p8 hypothetical protein phrog_1249 acetyltransferase other -1 8123 8575
AII27114.1 KM224878_p70 hypothetical protein phrog_19358 unknown function unknown function 1 49998 50246
AII27106.1 KM224878_p62 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 45309 45998
AII27061.1 KM224878_p17 hypothetical protein phrog_7931 unknown function unknown function -1 15939 16688
AII27048.1 KM224878_p4 hypothetical protein phrog_21136 unknown function unknown function -1 1120 1416
AII27097.1 KM224878_p53 endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 41834 42214
AII27077.1 KM224878_p33 hypothetical protein phrog_21997 unknown function unknown function 1 29031 29225
AII27079.1 KM224878_p35 hypothetical protein phrog_16974 unknown function unknown function 1 29633 30130
AII27047.1 KM224878_p3 hypothetical protein phrog_3899 unknown function unknown function -1 852 1151
AII27063.1 KM224878_p19 portal (connector) protein phrog_332 head-tail adaptor connector -1 16992 18737
AII27082.1 KM224878_p38 hypothetical protein phrog_17022 unknown function unknown function 1 31229 31963
AII27098.1 KM224878_p54 hypothetical protein phrog_18140 unknown function unknown function 1 42260 42754
AII27057.1 KM224878_p13 hypothetical protein phrog_18064 unknown function unknown function -1 12049 12462
AII27059.1 KM224878_p15 hypothetical protein phrog_18422 unknown function unknown function -1 14368 14877
AII27096.1 KM224878_p52 DNA polymerase I phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 41007 41840
AII27105.1 KM224878_p61 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 44875 45312
AII27094.1 KM224878_p50 DNA polymerase phrog_9556 DNA polymerase DNA, RNA and nucleotide metabolism 1 39272 40471
AII27095.1 KM224878_p51 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40576 40980
AII27066.1 KM224878_p22 hypothetical protein phrog_2432 unknown function unknown function -1 20812 21090
AII27092.1 KM224878_p48 hypothetical protein phrog_16700 unknown function unknown function 1 37599 38018
AII27075.1 KM224878_p31 hypothetical protein phrog_18025 unknown function unknown function 1 28503 28754
AII27102.1 KM224878_p58 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 43707 44558
AII27064.1 KM224878_p20 hypothetical protein phrog_38 terminase large subunit head and packaging -1 18737 20263
AII27101.1 KM224878_p57 hypothetical protein phrog_16403 unknown function unknown function 1 43265 43705
AII27103.1 KM224878_p59 hypothetical protein phrog_19549 unknown function unknown function 1 44528 44770
AII27078.1 KM224878_p34 hypothetical protein phrog_18100 unknown function unknown function 1 29246 29578
AII27088.1 KM224878_p44 hypothetical protein phrog_16777 unknown function unknown function 1 35681 36004
AII27049.1 KM224878_p5 hypothetical protein phrog_17082 unknown function unknown function -1 1419 3401
AII27100.1 KM224878_p56 hypothetical protein phrog_18273 unknown function unknown function 1 43057 43275
AII27058.1 KM224878_p14 hypothetical protein phrog_17462 unknown function unknown function -1 12655 14283
AII27076.1 KM224878_p32 hypothetical protein phrog_17158 unknown function unknown function 1 28812 28961
AII27091.1 KM224878_p47 hypothetical protein phrog_18510 unknown function unknown function 1 37063 37596
AII27090.1 KM224878_p46 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 36260 37072
AII27084.1 KM224878_p40 hypothetical protein phrog_33597 unknown function unknown function 1 32301 32513
AII27068.1 KM224878_p24 hypothetical protein phrog_14064 tail fiber protein tail -1 22159 23301