| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KM411960 |
Definition |
Pseudomonas phage phi176, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; Pseudomonas virus Ab09. |
DB of origin |
PVOG |
Length |
73048 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
54.85 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AIZ95021.1 | KM411960_p88 | hypothetical protein | phrog_8800 | unknown function | unknown function | 1 | 70486 | 70698 |
| AIZ94951.1 | KM411960_p18 | hypothetical protein | phrog_8585 | unknown function | unknown function | 1 | 5533 | 5880 |
| AIZ94943.1 | KM411960_p10 | hypothetical protein | phrog_8334 | unknown function | unknown function | 1 | 2832 | 3065 |
| AIZ94954.1 | KM411960_p21 | hypothetical protein | phrog_8144 | unknown function | unknown function | 1 | 7388 | 7702 |
| AIZ94938.1 | KM411960_p5 | hypothetical protein | phrog_7875 | unknown function | unknown function | 1 | 1547 | 1798 |
| AIZ94935.1 | KM411960_p2 | hypothetical protein | phrog_7624 | unknown function | unknown function | 1 | 872 | 1063 |
| AIZ94941.1 | KM411960_p8 | hypothetical protein | phrog_8477 | unknown function | unknown function | 1 | 2394 | 2597 |
| AIZ95014.1 | KM411960_p81 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 63911 | 66091 |
| AIZ94982.1 | KM411960_p49 | hypothetical protein | phrog_8796 | unknown function | unknown function | 1 | 27747 | 28304 |
| AIZ94964.1 | KM411960_p31 | hypothetical protein | phrog_8112 | unknown function | unknown function | 1 | 12574 | 12759 |
| AIZ94950.1 | KM411960_p17 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 5053 | 5493 |
| AIZ94956.1 | KM411960_p23 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 8042 | 9283 |
| AIZ94991.1 | KM411960_p58 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 36355 | 36693 |
| AIZ95019.1 | KM411960_p86 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69263 | 69988 |
| AIZ95008.1 | KM411960_p75 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 57107 | 59329 |
| AIZ94937.1 | KM411960_p4 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1305 | 1547 |
| AIZ94999.1 | KM411960_p66 | hypothetical protein | phrog_7564 | unknown function | unknown function | 1 | 42813 | 43250 |
| AIZ94976.1 | KM411960_p43 | hypothetical protein | phrog_10495 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22339 | 22530 |
| AIZ95006.1 | KM411960_p73 | hypothetical protein | phrog_6467 | unknown function | unknown function | -1 | 55094 | 56659 |
| AIZ95012.1 | KM411960_p79 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 62310 | 63503 |
| AIZ94974.1 | KM411960_p41 | hypothetical protein | phrog_10189 | unknown function | unknown function | 1 | 21801 | 21941 |
| AIZ95023.1 | KM411960_p90 | hypothetical protein | phrog_9146 | unknown function | unknown function | 1 | 70946 | 71254 |
| AIZ95000.1 | KM411960_p67 | hypothetical protein | phrog_7212 | unknown function | unknown function | 1 | 43308 | 43712 |
| AIZ94983.1 | KM411960_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28422 | 28877 |
| AIZ94992.1 | KM411960_p59 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36695 | 37705 |
| AIZ94973.1 | KM411960_p40 | hypothetical protein | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 21299 | 21769 |
| AIZ94972.1 | KM411960_p39 | hypothetical protein | phrog_12945 | ferredoxin | moron, auxiliary metabolic gene and host takeover | 1 | 21115 | 21339 |
| AIZ94962.1 | KM411960_p29 | hypothetical protein | phrog_8374 | unknown function | unknown function | 1 | 11591 | 12109 |
| AIZ95017.1 | KM411960_p84 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66880 | 67614 |
| AIZ94993.1 | KM411960_p60 | DNA primase P4 type | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37720 | 39888 |
| AIZ95025.1 | KM411960_p92 | hypothetical protein | phrog_6483 | unknown function | unknown function | 1 | 72585 | 72839 |
| AIZ94958.1 | KM411960_p25 | hypothetical protein | phrog_6140 | unknown function | unknown function | 1 | 9605 | 9829 |
| AIZ94990.1 | KM411960_p57 | hypothetical protein | phrog_3360 | unknown function | unknown function | 1 | 35900 | 36328 |
| AIZ95002.1 | KM411960_p69 | hypothetical protein | phrog_8394 | unknown function | unknown function | 1 | 44118 | 44354 |
| AIZ94979.1 | KM411960_p46 | hypothetical protein | phrog_7722 | unknown function | unknown function | 1 | 26888 | 27112 |
| AIZ94977.1 | KM411960_p44 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 22534 | 25050 |
| AIZ95013.1 | KM411960_p80 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 63503 | 63841 |
| AIZ94936.1 | KM411960_p3 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1078 | 1308 |
| AIZ95001.1 | KM411960_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43663 | 43818 |
| AIZ94980.1 | KM411960_p47 | hypothetical protein | phrog_6854 | holin | lysis | 1 | 27196 | 27513 |
| AIZ95024.1 | KM411960_p91 | hypothetical protein | phrog_8657 | unknown function | unknown function | 1 | 71460 | 72122 |
| AIZ95003.1 | KM411960_p70 | hypothetical protein | phrog_7891 | unknown function | unknown function | 1 | 44351 | 44668 |
| AIZ94944.1 | KM411960_p11 | hypothetical protein | phrog_8895 | unknown function | unknown function | 1 | 3062 | 3283 |
| AIZ95022.1 | KM411960_p89 | hypothetical protein | phrog_10651 | unknown function | unknown function | 1 | 70695 | 70955 |
| AIZ94995.1 | KM411960_p62 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40698 | 41444 |
| AIZ94997.1 | KM411960_p64 | hypothetical protein | phrog_3934 | unknown function | unknown function | 1 | 41810 | 42253 |
| AIZ94978.1 | KM411960_p45 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 25062 | 26840 |
| AIZ94989.1 | KM411960_p56 | tail fiber protein | phrog_496 | tail fiber protein | tail | -1 | 34218 | 35507 |
| AIZ94970.1 | KM411960_p37 | hypothetical protein | phrog_7095 | unknown function | unknown function | 1 | 17976 | 18503 |
| AIZ94981.1 | KM411960_p48 | hypothetical protein | phrog_8307 | unknown function | unknown function | 1 | 27563 | 27754 |
| AIZ94934.1 | KM411960_p1 | hypothetical protein | phrog_6483 | unknown function | unknown function | 1 | 200 | 454 |
| AIZ94957.1 | KM411960_p24 | hypothetical protein | phrog_8738 | unknown function | unknown function | 1 | 9380 | 9532 |
| AIZ94968.1 | KM411960_p35 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15491 | 16720 |
| AIZ94971.1 | KM411960_p38 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18503 | 21118 |
| AIZ94949.1 | KM411960_p16 | hypothetical protein | phrog_7756 | unknown function | unknown function | 1 | 4802 | 5053 |
| AIZ94953.1 | KM411960_p20 | hypothetical protein | phrog_8597 | unknown function | unknown function | 1 | 6837 | 7097 |
| AIZ94952.1 | KM411960_p19 | RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5892 | 6824 |
| AIZ95007.1 | KM411960_p74 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 56659 | 57126 |
| AIZ94946.1 | KM411960_p13 | hypothetical protein | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 3633 | 3923 |
| AIZ95018.1 | KM411960_p85 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67611 | 69263 |
| AIZ94994.1 | KM411960_p61 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39937 | 40671 |
| AIZ95011.1 | KM411960_p78 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 61076 | 62275 |
| AIZ94940.1 | KM411960_p7 | hypothetical protein | phrog_8449 | unknown function | unknown function | 1 | 2094 | 2390 |
| AIZ94960.1 | KM411960_p27 | hypothetical protein | phrog_8613 | unknown function | unknown function | 1 | 10456 | 11010 |
| AIZ94996.1 | KM411960_p63 | hypothetical protein | phrog_6026 | unknown function | unknown function | 1 | 41448 | 41813 |
| AIZ94969.1 | KM411960_p36 | RecD-like DNA helicase YrrC | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 16810 | 17976 |
| AIZ95004.1 | KM411960_p71 | hypothetical protein | phrog_8152 | unknown function | unknown function | 1 | 44678 | 44881 |
| AIZ94942.1 | KM411960_p9 | hypothetical protein | phrog_8885 | unknown function | unknown function | 1 | 2617 | 2835 |
| AIZ95015.1 | KM411960_p82 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 66126 | 66545 |
| AIZ94966.1 | KM411960_p33 | hypothetical protein | phrog_4781 | unknown function | unknown function | 1 | 13617 | 13859 |
| AIZ95016.1 | KM411960_p83 | hypothetical protein | phrog_8880 | unknown function | unknown function | 1 | 66549 | 66848 |
| AIZ94961.1 | KM411960_p28 | hypothetical protein | phrog_8451 | unknown function | unknown function | 1 | 11010 | 11591 |
| AIZ94985.1 | KM411960_p52 | hypothetical protein | phrog_2687 | unknown function | unknown function | -1 | 29388 | 29636 |
| AIZ94947.1 | KM411960_p14 | hypothetical protein | phrog_8775 | unknown function | unknown function | 1 | 4108 | 4401 |
| AIZ95005.1 | KM411960_p72 | hypothetical protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 44897 | 55093 |
| AIZ94998.1 | KM411960_p65 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 42241 | 42801 |
| AIZ94988.1 | KM411960_p55 | hypothetical protein | phrog_4047 | unknown function | unknown function | -1 | 33922 | 34221 |
| AIZ94967.1 | KM411960_p34 | ATP/GTP binding protein | phrog_1297 | ATPase | other | 1 | 13891 | 14961 |
| AIZ94986.1 | KM411960_p53 | hypothetical protein | phrog_7697 | tail fiber protein | tail | -1 | 29943 | 33215 |
| AIZ95020.1 | KM411960_p87 | hypothetical protein | phrog_9047 | unknown function | unknown function | 1 | 70055 | 70486 |
| AIZ94948.1 | KM411960_p15 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 4401 | 4802 |
| AIZ94945.1 | KM411960_p12 | hypothetical protein | phrog_8570 | unknown function | unknown function | 1 | 3356 | 3541 |
| AIZ95009.1 | KM411960_p76 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 59385 | 60350 |
| AIZ94987.1 | KM411960_p54 | hypothetical protein | phrog_3370 | unknown function | unknown function | -1 | 33254 | 33925 |
| AIZ94963.1 | KM411960_p30 | hypothetical protein | phrog_12464 | unknown function | unknown function | 1 | 12106 | 12330 |
| AIZ94939.1 | KM411960_p6 | hypothetical protein | phrog_2614 | unknown function | unknown function | 1 | 1802 | 2110 |
| AIZ95010.1 | KM411960_p77 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 60354 | 61019 |
| AIZ94955.1 | KM411960_p22 | hypothetical protein | phrog_8144 | unknown function | unknown function | 1 | 7735 | 8007 |
| AIZ94984.1 | KM411960_p51 | hypothetical protein | phrog_3108 | unknown function | unknown function | -1 | 28874 | 29398 |
| AIZ94975.1 | KM411960_p42 | hypothetical protein | phrog_8620 | unknown function | unknown function | 1 | 21944 | 22342 |
| AIZ94965.1 | KM411960_p32 | ATP-dependent Clp protease ATP-binding subunit ClpX | phrog_5534 | unknown function | unknown function | 1 | 12787 | 13620 |
| AIZ94959.1 | KM411960_p26 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 9833 | 10459 |