Genomic map of Pseudomonas phage vB_Pae_PS9N (KM434185)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM434185
Definition
Pseudomonas phage vB_Pae_PS9N, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; Pseudomonas virus Kakheti25.
DB of origin
PVOG
Length
43047
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
53.76
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIW01691.1 KM434185_p40 hypothetical protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 31443 32585
AIW01686.1 KM434185_p35 hypothetical protein phrog_687 structural protein head and packaging 1 23427 24392
AIW01672.1 KM434185_p21 hypothetical protein phrog_145 portal protein head and packaging 1 9411 10916
AIW01692.1 KM434185_p41 hypothetical protein phrog_11184 unknown function unknown function -1 32569 32796
AIW01681.1 KM434185_p30 hypothetical protein phrog_290 minor tail protein tail 1 16049 17584
AIW01664.1 KM434185_p13 hypothetical protein phrog_6168 unknown function unknown function 1 4693 4902
AIW01682.1 KM434185_p31 hypothetical protein phrog_313 Tail assembly chaperone tail 1 17648 18076
AIW01700.1 KM434185_p49 hypothetical protein phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 39051 41372
AIW01696.1 KM434185_p45 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 36890 37606
AIW01678.1 KM434185_p27 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 14682 15200
AIW01657.1 KM434185_p6 hypothetical protein phrog_8564 unknown function unknown function 1 2295 2498
AIW01667.1 KM434185_p16 hypothetical protein phrog_1356 holin lysis 1 5958 6224
AIW01666.1 KM434185_p15 hypothetical protein phrog_462 lipoprotein other 1 5707 5961
AIW01689.1 KM434185_p38 hypothetical protein phrog_1101 tail protein tail 1 26938 29379
AIW01654.1 KM434185_p3 hypothetical protein phrog_22104 unknown function unknown function 1 863 1084
AIW01680.1 KM434185_p29 hypothetical protein phrog_179 tail terminator connector 1 15581 16036
AIW01702.1 KM434185_p51 hypothetical protein singleton unknown function unknown function 1 41929 42135
AIW01663.1 KM434185_p12 hypothetical protein phrog_9241 unknown function unknown function 1 4275 4658
AIW01671.1 KM434185_p20 terminase-like family protein phrog_2 terminase large subunit head and packaging 1 7802 9397
AIW01665.1 KM434185_p14 hypothetical protein phrog_7597 unknown function unknown function 1 4986 5558
AIW01655.1 KM434185_p4 hypothetical protein phrog_11401 unknown function unknown function 1 1133 1507
AIW01669.1 KM434185_p18 hypothetical protein phrog_1026 Rz-like spanin lysis 1 6774 7079
AIW01701.1 KM434185_p50 hypothetical protein phrog_3633 unknown function unknown function 1 41525 41821
AIW01673.1 KM434185_p22 hypothetical protein phrog_241 head morphogenesis head and packaging 1 10928 12022
AIW01687.1 KM434185_p36 hypothetical protein phrog_1082 tail assembly protein tail 1 24398 26110
AIW01668.1 KM434185_p17 hypothetical protein phrog_1259 baseplate hub subunit and tail lysozyme tail 1 6217 6762
AIW01684.1 KM434185_p33 hypothetical protein phrog_3336 tail length tape measure protein tail 1 18850 22464
AIW01676.1 KM434185_p25 hypothetical protein phrog_9062 unknown function unknown function 1 13828 14232
AIW01685.1 KM434185_p34 hypothetical protein phrog_687 structural protein head and packaging 1 22465 23427
AIW01670.1 KM434185_p19 hypothetical protein phrog_5334 terminase small subunit head and packaging 1 7333 7821
AIW01662.1 KM434185_p11 tRNA-specific adenosine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 3802 4269
AIW01652.1 KM434185_p1 hypothetical protein phrog_10287 unknown function unknown function 1 111 386
AIW01659.1 KM434185_p8 hypothetical protein phrog_14000 unknown function unknown function 1 2735 3040
AIW01661.1 KM434185_p10 hypothetical protein phrog_16782 unknown function unknown function 1 3644 3811
AIW01677.1 KM434185_p26 hypothetical protein phrog_10405 virion structural protein head and packaging 1 14298 14669
AIW01705.1 KM434185_p54 hypothetical protein singleton unknown function unknown function 1 42580 42837
AIW01660.1 KM434185_p9 hypothetical protein phrog_14614 endolysin lysis 1 3057 3347
AIW01653.1 KM434185_p2 hypothetical protein phrog_10560 unknown function unknown function 1 537 779
AIW01656.1 KM434185_p5 hypothetical protein phrog_824 unknown function unknown function 1 1786 2295
AIW01703.1 KM434185_p52 hypothetical protein phrog_20574 unknown function unknown function 1 42148 42297
AIW01699.1 KM434185_p48 hypothetical protein phrog_13059 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 38873 39061
AIW01683.1 KM434185_p32 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 18410 18844
AIW01693.1 KM434185_p42 type III restriction enzyme res subunit phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 32801 34456
AIW01704.1 KM434185_p53 hypothetical protein phrog_9154 unknown function unknown function 1 42368 42574
AIW01679.1 KM434185_p28 hypothetical protein phrog_161 head closure Hc1 connector 1 15204 15584
AIW01697.1 KM434185_p46 hypothetical protein phrog_2480 unknown function unknown function -1 37661 38101
AIW01674.1 KM434185_p23 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 12059 12778
AIW01695.1 KM434185_p44 hypothetical protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 36058 36831
AIW01694.1 KM434185_p43 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 34449 35546
AIW01688.1 KM434185_p37 hypothetical protein phrog_778 tail assembly protein tail 1 26110 26934
AIW01690.1 KM434185_p39 DNA polymerase I phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 29380 31431
AIW01698.1 KM434185_p47 hypothetical protein phrog_229 MazG-like pyrophosphatase other -1 38178 38735
AIW01675.1 KM434185_p24 hypothetical protein phrog_247 major head protein head and packaging 1 12781 13758
AIW01658.1 KM434185_p7 hypothetical protein phrog_13844 unknown function unknown function 1 2495 2674