| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KM434185 |
Definition |
Pseudomonas phage vB_Pae_PS9N, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; Pseudomonas virus Kakheti25. |
DB of origin |
PVOG |
Length |
43047 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
53.76 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AIW01691.1 | KM434185_p40 | hypothetical protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 31443 | 32585 |
| AIW01686.1 | KM434185_p35 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 23427 | 24392 |
| AIW01672.1 | KM434185_p21 | hypothetical protein | phrog_145 | portal protein | head and packaging | 1 | 9411 | 10916 |
| AIW01692.1 | KM434185_p41 | hypothetical protein | phrog_11184 | unknown function | unknown function | -1 | 32569 | 32796 |
| AIW01681.1 | KM434185_p30 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 16049 | 17584 |
| AIW01664.1 | KM434185_p13 | hypothetical protein | phrog_6168 | unknown function | unknown function | 1 | 4693 | 4902 |
| AIW01682.1 | KM434185_p31 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 17648 | 18076 |
| AIW01700.1 | KM434185_p49 | hypothetical protein | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 39051 | 41372 |
| AIW01696.1 | KM434185_p45 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 36890 | 37606 |
| AIW01678.1 | KM434185_p27 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 14682 | 15200 |
| AIW01657.1 | KM434185_p6 | hypothetical protein | phrog_8564 | unknown function | unknown function | 1 | 2295 | 2498 |
| AIW01667.1 | KM434185_p16 | hypothetical protein | phrog_1356 | holin | lysis | 1 | 5958 | 6224 |
| AIW01666.1 | KM434185_p15 | hypothetical protein | phrog_462 | lipoprotein | other | 1 | 5707 | 5961 |
| AIW01689.1 | KM434185_p38 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 26938 | 29379 |
| AIW01654.1 | KM434185_p3 | hypothetical protein | phrog_22104 | unknown function | unknown function | 1 | 863 | 1084 |
| AIW01680.1 | KM434185_p29 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 15581 | 16036 |
| AIW01702.1 | KM434185_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41929 | 42135 |
| AIW01663.1 | KM434185_p12 | hypothetical protein | phrog_9241 | unknown function | unknown function | 1 | 4275 | 4658 |
| AIW01671.1 | KM434185_p20 | terminase-like family protein | phrog_2 | terminase large subunit | head and packaging | 1 | 7802 | 9397 |
| AIW01665.1 | KM434185_p14 | hypothetical protein | phrog_7597 | unknown function | unknown function | 1 | 4986 | 5558 |
| AIW01655.1 | KM434185_p4 | hypothetical protein | phrog_11401 | unknown function | unknown function | 1 | 1133 | 1507 |
| AIW01669.1 | KM434185_p18 | hypothetical protein | phrog_1026 | Rz-like spanin | lysis | 1 | 6774 | 7079 |
| AIW01701.1 | KM434185_p50 | hypothetical protein | phrog_3633 | unknown function | unknown function | 1 | 41525 | 41821 |
| AIW01673.1 | KM434185_p22 | hypothetical protein | phrog_241 | head morphogenesis | head and packaging | 1 | 10928 | 12022 |
| AIW01687.1 | KM434185_p36 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 24398 | 26110 |
| AIW01668.1 | KM434185_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 6217 | 6762 |
| AIW01684.1 | KM434185_p33 | hypothetical protein | phrog_3336 | tail length tape measure protein | tail | 1 | 18850 | 22464 |
| AIW01676.1 | KM434185_p25 | hypothetical protein | phrog_9062 | unknown function | unknown function | 1 | 13828 | 14232 |
| AIW01685.1 | KM434185_p34 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 22465 | 23427 |
| AIW01670.1 | KM434185_p19 | hypothetical protein | phrog_5334 | terminase small subunit | head and packaging | 1 | 7333 | 7821 |
| AIW01662.1 | KM434185_p11 | tRNA-specific adenosine deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 3802 | 4269 |
| AIW01652.1 | KM434185_p1 | hypothetical protein | phrog_10287 | unknown function | unknown function | 1 | 111 | 386 |
| AIW01659.1 | KM434185_p8 | hypothetical protein | phrog_14000 | unknown function | unknown function | 1 | 2735 | 3040 |
| AIW01661.1 | KM434185_p10 | hypothetical protein | phrog_16782 | unknown function | unknown function | 1 | 3644 | 3811 |
| AIW01677.1 | KM434185_p26 | hypothetical protein | phrog_10405 | virion structural protein | head and packaging | 1 | 14298 | 14669 |
| AIW01705.1 | KM434185_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42580 | 42837 |
| AIW01660.1 | KM434185_p9 | hypothetical protein | phrog_14614 | endolysin | lysis | 1 | 3057 | 3347 |
| AIW01653.1 | KM434185_p2 | hypothetical protein | phrog_10560 | unknown function | unknown function | 1 | 537 | 779 |
| AIW01656.1 | KM434185_p5 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 1786 | 2295 |
| AIW01703.1 | KM434185_p52 | hypothetical protein | phrog_20574 | unknown function | unknown function | 1 | 42148 | 42297 |
| AIW01699.1 | KM434185_p48 | hypothetical protein | phrog_13059 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38873 | 39061 |
| AIW01683.1 | KM434185_p32 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 18410 | 18844 |
| AIW01693.1 | KM434185_p42 | type III restriction enzyme res subunit | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 32801 | 34456 |
| AIW01704.1 | KM434185_p53 | hypothetical protein | phrog_9154 | unknown function | unknown function | 1 | 42368 | 42574 |
| AIW01679.1 | KM434185_p28 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 15204 | 15584 |
| AIW01697.1 | KM434185_p46 | hypothetical protein | phrog_2480 | unknown function | unknown function | -1 | 37661 | 38101 |
| AIW01674.1 | KM434185_p23 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 12059 | 12778 |
| AIW01695.1 | KM434185_p44 | hypothetical protein | phrog_6015 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 36058 | 36831 |
| AIW01694.1 | KM434185_p43 | hypothetical protein | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 34449 | 35546 |
| AIW01688.1 | KM434185_p37 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 26110 | 26934 |
| AIW01690.1 | KM434185_p39 | DNA polymerase I | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29380 | 31431 |
| AIW01698.1 | KM434185_p47 | hypothetical protein | phrog_229 | MazG-like pyrophosphatase | other | -1 | 38178 | 38735 |
| AIW01675.1 | KM434185_p24 | hypothetical protein | phrog_247 | major head protein | head and packaging | 1 | 12781 | 13758 |
| AIW01658.1 | KM434185_p7 | hypothetical protein | phrog_13844 | unknown function | unknown function | 1 | 2495 | 2674 |