| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KM591905 |
Definition |
Mycobacterium phage RonRayGun, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bernalvirus; unclassified Bernalvirus. |
DB of origin |
PVOG |
Length |
42596 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
61 |
%GC |
66.13 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AIT13453.1 | KM591905_p40 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 31491 | 31892 |
| AIT13468.1 | KM591905_p55 | hypothetical protein | phrog_18332 | unknown function | unknown function | -1 | 39019 | 39642 |
| AIT13456.1 | KM591905_p43 | hypothetical protein | phrog_19059 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 32522 | 33046 |
| AIT13467.1 | KM591905_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38385 | 39041 |
| AIT13428.1 | KM591905_p16 | hypothetical protein | phrog_19026 | tail assembly chaperone | tail | 1 | 10873 | 11475 |
| AIT13447.1 | KM591905_p34 | immunity repressor | phrog_5301 | transcriptional repressor | transcription regulation | -1 | 29442 | 29816 |
| AIT13434.1 | KM591905_p21 | hypothetical protein | phrog_19553 | minor tail protein | tail | 1 | 19663 | 20109 |
| AIT13421.1 | KM591905_p8 | hypothetical protein | phrog_1328 | major head protein | head and packaging | 1 | 6938 | 7921 |
| AIT13474.1 | KM591905_p61 | hypothetical protein | phrog_35546 | unknown function | unknown function | 1 | 42159 | 42515 |
| AIT13461.1 | KM591905_p48 | HTH DNA binding protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 35522 | 36403 |
| AIT13426.1 | KM591905_p13 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9373 | 9864 |
| AIT13470.1 | KM591905_p57 | hypothetical protein | phrog_21728 | unknown function | unknown function | 1 | 40622 | 40849 |
| AIT13455.1 | KM591905_p42 | hypothetical protein | phrog_9420 | unknown function | unknown function | 1 | 32146 | 32520 |
| AIT13445.1 | KM591905_p32 | hypothetical protein | phrog_19123 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 27161 | 27508 |
| AIT13469.1 | KM591905_p56 | hypothetical protein | phrog_5436 | unknown function | unknown function | -1 | 39675 | 40571 |
| AIT13462.1 | KM591905_p49 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 36400 | 36915 |
| AIT13431.1 | KM591905_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16018 | 16983 |
| AIT13433.1 | KM591905_p20 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 18683 | 19657 |
| AIT13420.1 | KM591905_p7 | hypothetical protein | phrog_15003 | head scaffolding protein | head and packaging | 1 | 6163 | 6921 |
| AIT13463.1 | KM591905_p50 | hypothetical protein | phrog_20101 | unknown function | unknown function | 1 | 36912 | 37217 |
| AIT13436.1 | KM591905_p23 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 21395 | 21715 |
| AIT13446.1 | KM591905_p33 | integrase | phrog_1 | integrase | integration and excision | 1 | 27780 | 29102 |
| AIT13430.1 | KM591905_p17 | tapemeasure | phrog_3547 | tail length tape measure protein | tail | 1 | 11932 | 16017 |
| AIT13415.1 | KM591905_p2 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 332 | 724 |
| AIT13451.1 | KM591905_p38 | hypothetical protein | phrog_19582 | unknown function | unknown function | 1 | 30960 | 31163 |
| AIT13473.1 | KM591905_p60 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 41425 | 42162 |
| AIT13419.1 | KM591905_p6 | scaffold protein | phrog_1757 | unknown function | unknown function | 1 | 5915 | 6094 |
| AIT13466.1 | KM591905_p53 | hypothetical protein | phrog_17722 | unknown function | unknown function | 1 | 38154 | 38357 |
| AIT13423.1 | KM591905_p10 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8271 | 8714 |
| AIT13414.1 | KM591905_p1 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 89 | 325 |
| AIT13435.1 | KM591905_p22 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 20109 | 21380 |
| AIT13448.1 | KM591905_p35 | MPME1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | -1 | 29957 | 30289 |
| AIT13439.1 | KM591905_p26 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23229 | 23579 |
| AIT13457.1 | KM591905_p44 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 33043 | 33873 |
| AIT13452.1 | KM591905_p39 | hypothetical protein | phrog_12989 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 31160 | 31453 |
| AIT13425.1 | KM591905_p12 | hypothetical protein | phrog_5210 | neck protein | connector | 1 | 9006 | 9371 |
| AIT13437.1 | KM591905_p24 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 21727 | 22017 |
| AIT13427.1 | KM591905_p14 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 9882 | 10814 |
| AIT13429.1 | KM591905_p15 | hypothetical protein | phrog_21634 | tail assembly chaperone | tail | 1 | 10873 | 11927 |
| AIT13444.1 | KM591905_p31 | hypothetical protein | phrog_2342 | unknown function | unknown function | -1 | 26455 | 27168 |
| AIT13442.1 | KM591905_p29 | hypothetical protein | phrog_17951 | unknown function | unknown function | 1 | 25680 | 25976 |
| AIT13440.1 | KM591905_p27 | lysin A | phrog_317 | endolysin | lysis | 1 | 23579 | 25162 |
| AIT13460.1 | KM591905_p47 | hypothetical protein | phrog_19644 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35367 | 35516 |
| AIT13454.1 | KM591905_p41 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 31892 | 32149 |
| AIT13459.1 | KM591905_p46 | hypothetical protein | phrog_7969 | unknown function | unknown function | 1 | 35179 | 35370 |
| AIT13472.1 | KM591905_p59 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41099 | 41398 |
| AIT13458.1 | KM591905_p45 | hypothetical protein | phrog_3657 | unknown function | unknown function | 1 | 33870 | 35162 |
| AIT13438.1 | KM591905_p25 | hypothetical protein | phrog_19249 | minor tail protein | tail | 1 | 22024 | 23214 |
| AIT13416.1 | KM591905_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 724 | 2607 |
| AIT13422.1 | KM591905_p9 | hypothetical protein | phrog_20826 | head-tail connector protein | connector | 1 | 7952 | 8284 |
| AIT13424.1 | KM591905_p11 | hypothetical protein | phrog_19486 | head-tail connector protein | connector | 1 | 8695 | 9006 |
| AIT13441.1 | KM591905_p28 | holin | phrog_526 | holin | lysis | 1 | 25159 | 25599 |
| AIT13432.1 | KM591905_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16980 | 18686 |
| AIT13417.1 | KM591905_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2624 | 4189 |
| AIT13471.1 | KM591905_p58 | hypothetical protein | phrog_22083 | unknown function | unknown function | 1 | 40965 | 41102 |
| AIT13443.1 | KM591905_p30 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 26061 | 26396 |
| AIT13450.1 | KM591905_p37 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 30757 | 30963 |
| AIT13418.1 | KM591905_p5 | protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4170 | 5918 |
| AIT13465.1 | KM591905_p52 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 37468 | 38157 |
| AIT13464.1 | KM591905_p51 | hypothetical protein | phrog_21821 | unknown function | unknown function | 1 | 37214 | 37471 |
| AIT13449.1 | KM591905_p36 | HTH DNA binding protein | phrog_3642 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30482 | 30760 |