Genomic map of Vibrio phage CJY (KM612260)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM612260
Definition
Vibrio phage CJY, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
PVOG
Length
39542
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
50.55
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIZ01401.1 KM612260_p2 hypothetical protein phrog_8823 terminase small subunit head and packaging 1 650 1150
AIZ01403.1 KM612260_p4 hypothetical protein phrog_332 head-tail adaptor connector 1 2854 4497
AIZ01424.1 KM612260_p25 hypothetical protein phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 22828 23340
AIZ01415.1 KM612260_p16 hypothetical protein phrog_9290 unknown function unknown function 1 13356 13760
AIZ01420.1 KM612260_p21 outer capsid protein phrog_8700 unknown function unknown function 1 20442 21824
AIZ01447.1 KM612260_p48 hypothetical protein phrog_12668 unknown function unknown function -1 39237 39506
AIZ01405.1 KM612260_p6 hypothetical protein phrog_5977 unknown function unknown function 1 4737 4994
AIZ01441.1 KM612260_p42 hypothetical protein phrog_9495 unknown function unknown function -1 36736 37107
AIZ01400.1 KM612260_p1 hypothetical protein phrog_9836 unknown function unknown function 1 412 633
AIZ01442.1 KM612260_p43 hypothetical protein phrog_13675 unknown function unknown function -1 37104 37364
AIZ01416.1 KM612260_p17 hypothetical protein phrog_9153 unknown function unknown function 1 13757 15841
AIZ01414.1 KM612260_p15 hypothetical protein phrog_376 tail protein tail 1 11566 13350
AIZ01444.1 KM612260_p45 hypothetical protein phrog_9131 unknown function unknown function -1 37657 37947
AIZ01408.1 KM612260_p9 hypothetical protein phrog_8977 unknown function unknown function 1 7044 7313
AIZ01410.1 KM612260_p11 hypothetical protein phrog_8135 unknown function unknown function 1 8173 8538
AIZ01427.1 KM612260_p28 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 24677 26965
AIZ01434.1 KM612260_p35 hypothetical protein phrog_8941 unknown function unknown function -1 32754 33446
AIZ01438.1 KM612260_p39 hypothetical protein phrog_9688 unknown function unknown function -1 34820 35590
AIZ01445.1 KM612260_p46 hypothetical protein phrog_8878 unknown function unknown function -1 38054 38644
AIZ01407.1 KM612260_p8 hypothetical protein phrog_3437 major head protein head and packaging 1 6009 6977
AIZ01430.1 KM612260_p31 hypothetical protein phrog_2402 unknown function unknown function -1 29407 30216
AIZ01419.1 KM612260_p20 tail fiber phrog_4440 tail fiber protein tail 1 19367 20440
AIZ01446.1 KM612260_p47 hypothetical protein phrog_14193 unknown function unknown function -1 38713 39204
AIZ01433.1 KM612260_p34 hypothetical protein phrog_9940 unknown function unknown function -1 32401 32754
AIZ01402.1 KM612260_p3 terminase phrog_2 terminase large subunit head and packaging 1 1137 2843
AIZ01435.1 KM612260_p36 hypothetical protein phrog_4049 unknown function unknown function -1 33579 34043
AIZ01406.1 KM612260_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4999 5841
AIZ01423.1 KM612260_p24 hypothetical protein phrog_10658 unknown function unknown function -1 22670 22831
AIZ01418.1 KM612260_p19 hypothetical protein phrog_684 virion structural protein head and packaging 1 17015 19363
AIZ01422.1 KM612260_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 22243 22680
AIZ01436.1 KM612260_p37 hypothetical protein phrog_3392 unknown function unknown function -1 34040 34450
AIZ01421.1 KM612260_p22 hypothetical protein phrog_474 phosphofructokinase other -1 21849 22166
AIZ01417.1 KM612260_p18 hypothetical protein phrog_8824 unknown function unknown function 1 15841 17013
AIZ01432.1 KM612260_p33 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30867 32336
AIZ01409.1 KM612260_p10 hypothetical protein phrog_8869 unknown function unknown function 1 7328 8176
AIZ01443.1 KM612260_p44 hypothetical protein phrog_9197 unknown function unknown function -1 37364 37588
AIZ01412.1 KM612260_p13 hypothetical protein phrog_8910 unknown function unknown function 1 9006 9308
AIZ01425.1 KM612260_p26 hypothetical protein phrog_9860 unknown function unknown function -1 23342 23602
AIZ01431.1 KM612260_p32 hypothetical protein phrog_2378 unknown function unknown function -1 30337 30804
AIZ01404.1 KM612260_p5 hypothetical protein phrog_9429 unknown function unknown function 1 4497 4724
AIZ01411.1 KM612260_p12 hypothetical protein phrog_894 endolysin lysis 1 8540 9013
AIZ01429.1 KM612260_p30 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28865 29341
AIZ01426.1 KM612260_p27 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 23604 24635
AIZ01413.1 KM612260_p14 hypothetical protein phrog_9239 tail tubular protein tail 1 9332 11557
AIZ01428.1 KM612260_p29 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26955 28856
AIZ01439.1 KM612260_p40 hypothetical protein phrog_9060 unknown function unknown function -1 35689 36174
AIZ01440.1 KM612260_p41 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 36184 36633
AIZ01437.1 KM612260_p38 hypothetical protein phrog_9382 unknown function unknown function -1 34452 34772