Genomic map of Vibrio phage J3 (KM612265)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM612265
Definition
Vibrio phage J3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
PVOG
Length
39782
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
50.54
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIZ01676.1 KM612265_p37 hypothetical protein phrog_3392 unknown function unknown function -1 34028 34438
AIZ01671.1 KM612265_p32 hypothetical protein phrog_2378 unknown function unknown function -1 30337 30804
AIZ01647.1 KM612265_p8 hypothetical protein phrog_3437 major head protein head and packaging 1 6009 6977
AIZ01686.1 KM612265_p47 hypothetical protein phrog_8878 unknown function unknown function -1 38292 38882
AIZ01680.1 KM612265_p41 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 36172 36621
AIZ01670.1 KM612265_p31 hypothetical protein phrog_2402 unknown function unknown function -1 29407 30216
AIZ01649.1 KM612265_p10 hypothetical protein phrog_8869 unknown function unknown function 1 7328 8176
AIZ01650.1 KM612265_p11 hypothetical protein phrog_8135 unknown function unknown function 1 8173 8538
AIZ01653.1 KM612265_p14 hypothetical protein phrog_9239 tail tubular protein tail 1 9332 11557
AIZ01652.1 KM612265_p13 hypothetical protein phrog_8910 unknown function unknown function 1 9006 9308
AIZ01645.1 KM612265_p6 hypothetical protein phrog_5977 unknown function unknown function 1 4737 4994
AIZ01657.1 KM612265_p18 hypothetical protein phrog_8824 unknown function unknown function 1 15841 17013
AIZ01669.1 KM612265_p30 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28865 29341
AIZ01683.1 KM612265_p44 hypothetical protein phrog_9197 unknown function unknown function -1 37352 37576
AIZ01668.1 KM612265_p29 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26955 28856
AIZ01661.1 KM612265_p22 hypothetical protein phrog_474 phosphofructokinase other -1 21849 22166
AIZ01651.1 KM612265_p12 hypothetical protein phrog_894 endolysin lysis 1 8540 9013
AIZ01641.1 KM612265_p2 hypothetical protein phrog_8823 terminase small subunit head and packaging 1 650 1150
AIZ01667.1 KM612265_p28 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 24677 26965
AIZ01660.1 KM612265_p21 outer capsid protein phrog_8700 unknown function unknown function 1 20442 21824
AIZ01672.1 KM612265_p33 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30867 32336
AIZ01673.1 KM612265_p34 hypothetical protein phrog_9940 unknown function unknown function -1 32401 32754
AIZ01688.1 KM612265_p49 hypothetical protein phrog_12668 unknown function unknown function -1 39477 39746
AIZ01662.1 KM612265_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 22243 22680
AIZ01685.1 KM612265_p46 hypothetical protein phrog_9346 unknown function unknown function -1 38042 38281
AIZ01643.1 KM612265_p4 hypothetical protein phrog_332 head-tail adaptor connector 1 2854 4497
AIZ01666.1 KM612265_p27 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 23604 24635
AIZ01648.1 KM612265_p9 hypothetical protein phrog_8977 unknown function unknown function 1 7044 7313
AIZ01678.1 KM612265_p39 hypothetical protein phrog_9688 unknown function unknown function -1 34808 35578
AIZ01644.1 KM612265_p5 hypothetical protein phrog_9429 unknown function unknown function 1 4497 4724
AIZ01684.1 KM612265_p45 hypothetical protein phrog_9131 unknown function unknown function -1 37645 37935
AIZ01675.1 KM612265_p36 hypothetical protein phrog_4049 unknown function unknown function -1 33567 34031
AIZ01646.1 KM612265_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4999 5841
AIZ01687.1 KM612265_p48 hypothetical protein phrog_14193 unknown function unknown function -1 38951 39349
AIZ01642.1 KM612265_p3 terminase phrog_2 terminase large subunit head and packaging 1 1137 2843
AIZ01677.1 KM612265_p38 hypothetical protein phrog_9382 unknown function unknown function -1 34440 34760
AIZ01640.1 KM612265_p1 hypothetical protein phrog_9836 unknown function unknown function 1 412 633
AIZ01681.1 KM612265_p42 hypothetical protein phrog_9495 unknown function unknown function -1 36724 37095
AIZ01656.1 KM612265_p17 hypothetical protein phrog_9153 unknown function unknown function 1 13757 15841
AIZ01665.1 KM612265_p26 hypothetical protein phrog_9860 unknown function unknown function -1 23342 23602
AIZ01663.1 KM612265_p24 hypothetical protein phrog_10658 unknown function unknown function -1 22670 22831
AIZ01682.1 KM612265_p43 hypothetical protein phrog_13675 unknown function unknown function -1 37092 37352
AIZ01674.1 KM612265_p35 hypothetical protein phrog_8941 unknown function unknown function -1 32754 33434
AIZ01654.1 KM612265_p15 hypothetical protein phrog_376 tail protein tail 1 11566 13350
AIZ01655.1 KM612265_p16 hypothetical protein phrog_9290 unknown function unknown function 1 13356 13760
AIZ01679.1 KM612265_p40 hypothetical protein phrog_9060 unknown function unknown function -1 35677 36162
AIZ01658.1 KM612265_p19 hypothetical protein phrog_684 virion structural protein head and packaging 1 17015 19363
AIZ01659.1 KM612265_p20 tail fiber phrog_4440 tail fiber protein tail 1 19367 20440
AIZ01664.1 KM612265_p25 hypothetical protein phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 22828 23340