Genomic map of Mycobacterium phage Gomashi (KM923970)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM923970
Definition
Mycobacterium phage Gomashi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus.
DB of origin
PVOG
Length
41903
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
66.59
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJK27315.1 KM923970_p47 hypothetical protein phrog_7826 unknown function unknown function 1 35895 36140
AJK27286.1 KM923970_p18 minor tail protein phrog_110 minor tail protein tail 1 16650 18404
AJK27276.1 KM923970_p8 hypothetical protein phrog_3101 unknown function unknown function 1 8076 8303
AJK27308.1 KM923970_p40 hypothetical protein phrog_7392 unknown function unknown function 1 31425 31775
AJK27298.1 KM923970_p30 hypothetical protein phrog_1177 unknown function unknown function 1 26791 27111
AJK27283.1 KM923970_p15 tail assembly chaperone phrog_1861 unknown function unknown function 1 10570 11079
AJK27307.1 KM923970_p39 hypothetical protein phrog_7486 unknown function unknown function 1 31276 31425
AJK27302.1 KM923970_p34 RDF protein phrog_7506 recombination directionality factor integration and excision 1 29499 29756
AJK27320.1 KM923970_p52 hypothetical protein phrog_9043 unknown function unknown function 1 37609 38052
AJK27275.1 KM923970_p7 capsid protein phrog_10 major head protein head and packaging 1 7104 8039
AJK27281.1 KM923970_p13 major tail subunit phrog_117 major tail protein tail 1 9855 10469
AJK27306.1 KM923970_p38 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 30929 31279
AJK27289.1 KM923970_p21 hypothetical protein phrog_1736 minor tail protein tail 1 20009 20443
AJK27319.1 KM923970_p51 hypothetical protein phrog_13172 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 37478 37612
AJK27318.1 KM923970_p50 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36915 37505
AJK27282.1 KM923970_p14 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10570 11465
AJK27301.1 KM923970_p33 repressor phrog_2328 transcriptional repressor transcription regulation -1 28915 29400
AJK27285.1 KM923970_p17 hypothetical protein phrog_106 minor tail protein tail 1 15478 16650
AJK27325.1 KM923970_p57 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 39877 40248
AJK27310.1 KM923970_p42 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31908 32993
AJK27317.1 KM923970_p49 hypothetical protein phrog_7576 unknown function unknown function 1 36478 36918
AJK27288.1 KM923970_p20 minor tail protein phrog_1565 minor tail protein tail 1 18862 19998
AJK27295.1 KM923970_p27 lysin A phrog_880 endolysin lysis 1 23886 25202
AJK27326.1 KM923970_p58 hypothetical protein phrog_34211 unknown function unknown function 1 40306 40395
AJK27312.1 KM923970_p44 hypothetical protein phrog_7227 unknown function unknown function 1 34396 34950
AJK27296.1 KM923970_p28 lysin B phrog_102 endolysin lysis 1 25202 26410
AJK27273.1 KM923970_p5 hypothetical protein phrog_1757 unknown function unknown function 1 6190 6396
AJK27305.1 KM923970_p37 hypothetical protein phrog_10116 unknown function unknown function 1 30750 30932
AJK27327.1 KM923970_p59 hypothetical protein phrog_658 unknown function unknown function 1 40439 40762
AJK27277.1 KM923970_p9 hypothetical protein phrog_1290 head-tail adaptor connector 1 8315 8812
AJK27271.1 KM923970_p3 portal protein phrog_104 portal protein head and packaging 1 1889 3403
AJK27292.1 KM923970_p24 hypothetical protein phrog_8923 unknown function unknown function 1 23174 23356
AJK27324.1 KM923970_p56 hypothetical protein phrog_5436 unknown function unknown function 1 38976 39767
AJK27279.1 KM923970_p11 hypothetical protein phrog_387 neck protein connector 1 9155 9418
AJK27300.1 KM923970_p32 integrase phrog_1 integrase integration and excision -1 27722 28918
AJK27269.1 KM923970_p1 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 44 388
AJK27280.1 KM923970_p12 hypothetical protein phrog_123 tail terminator connector 1 9415 9858
AJK27293.1 KM923970_p25 hypothetical protein phrog_9511 unknown function unknown function 1 23356 23631
AJK27321.1 KM923970_p53 hypothetical protein phrog_10006 unknown function unknown function 1 38049 38207
AJK27309.1 KM923970_p41 hypothetical protein phrog_6734 unknown function unknown function 1 31759 31911
AJK27314.1 KM923970_p46 hypothetical protein phrog_15494 unknown function unknown function 1 35518 35907
AJK27323.1 KM923970_p55 hypothetical protein phrog_11054 unknown function unknown function 1 38689 38973
AJK27272.1 KM923970_p4 protease phrog_1752 head maturation protease head and packaging 1 3404 6193
AJK27274.1 KM923970_p6 scaffold protein phrog_233 head scaffolding protein head and packaging 1 6515 7057
AJK27304.1 KM923970_p36 hypothetical protein phrog_549 unknown function unknown function 1 30151 30750
AJK27291.1 KM923970_p23 hypothetical protein phrog_7598 unknown function unknown function 1 22851 23171
AJK27311.1 KM923970_p43 RecT phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32990 34399
AJK27297.1 KM923970_p29 holin phrog_7198 holin lysis 1 26436 26786
AJK27290.1 KM923970_p22 hypothetical protein phrog_7565 minor tail protein tail 1 20443 22836
AJK27299.1 KM923970_p31 hypothetical protein phrog_798 unknown function unknown function 1 27108 27725
AJK27294.1 KM923970_p26 hypothetical protein phrog_8517 unknown function unknown function 1 23631 23825
AJK27287.1 KM923970_p19 hypothetical protein phrog_1697 minor tail protein tail 1 18404 18865
AJK27313.1 KM923970_p45 hypothetical protein phrog_14897 unknown function unknown function 1 35090 35521
AJK27270.1 KM923970_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 456 1892
AJK27328.1 KM923970_p60 hypothetical protein phrog_7328 unknown function unknown function 1 40861 41103
AJK27330.1 KM923970_p62 hypothetical protein phrog_3468 unknown function unknown function 1 41547 41768
AJK27322.1 KM923970_p54 hypothetical protein phrog_7600 unknown function unknown function 1 38204 38632
AJK27316.1 KM923970_p48 hypothetical protein phrog_2247 unknown function unknown function 1 36137 36481
AJK27284.1 KM923970_p16 tapemeasure phrog_971 endolysin lysis 1 11465 15478
AJK27303.1 KM923970_p35 hypothetical protein phrog_5081 unknown function unknown function 1 29753 30151
AJK27278.1 KM923970_p10 hypothetical protein phrog_763 head-tail adaptor connector 1 8809 9168
AJK27329.1 KM923970_p61 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41127 41453