Genomic map of Clostridium phage phiCTC2A (KM983333)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM983333
Definition
Clostridium phage phiCTC2A, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
47020
Host Name
Clostridium tetani
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
28.4
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJA42905.1 KM983333_p19 general stress protein phrog_3636 DNA binding protein DNA, RNA and nucleotide metabolism -1 10608 11048
AJA42920.1 KM983333_p34 head morphogenesis protein phrog_21401 pilot protein for DNA ejection tail 1 19942 21642
AJA42928.1 KM983333_p42 hypothetical protein phrog_8435 unknown function unknown function 1 24667 25032
AJA42940.1 KM983333_p54 hypothetical protein phrog_9485 virion structural protein head and packaging 1 33177 34412
AJA42947.1 KM983333_p61 hemolysin XhlA phrog_1193 hemolysin other 1 41671 41904
AJA42923.1 KM983333_p37 capsid scaffolding protein phrog_194 head scaffolding protein head and packaging 1 22103 22720
AJA42948.1 KM983333_p62 holin phrog_1129 holin lysis 1 41916 42185
AJA42939.1 KM983333_p53 hypothetical protein phrog_16549 unknown function unknown function 1 32143 33174
AJA42932.1 KM983333_p46 hypothetical protein phrog_6280 unknown function unknown function 1 26695 27159
AJA42931.1 KM983333_p45 hypothetical protein phrog_6686 tail tube protein tail 1 25810 26682
AJA42934.1 KM983333_p48 hypothetical protein phrog_1315 unknown function unknown function 1 27326 27652
AJA42935.1 KM983333_p49 tail tape measure protein phrog_28 tail length tape measure protein tail 1 27710 29755
AJA42949.1 KM983333_p63 N-acetylmuramoyl-L-alanine amidase phrog_10967 endolysin lysis 1 42186 42986
AJA42893.1 KM983333_p7 kilA anti-repressor protein phrog_130 anti-repressor Ant transcription regulation 1 3550 4353
AJA42906.1 KM983333_p20 hypothetical protein phrog_10701 unknown function unknown function 1 11533 11694
AJA42941.1 KM983333_p55 hypothetical protein phrog_14012 unknown function unknown function 1 34425 36317
AJA42929.1 KM983333_p43 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 25037 25381
AJA42950.1 KM983333_p64 hypothetical protein phrog_17559 unknown function unknown function 1 43219 44271
AJA42944.1 KM983333_p58 hypothetical protein phrog_15809 unknown function unknown function 1 37601 38683
AJA42909.1 KM983333_p23 hypothetical protein phrog_17601 unknown function unknown function 1 12015 12215
AJA42912.1 KM983333_p26 hypothetical protein phrog_3928 unknown function unknown function 1 13280 13456
AJA42901.1 KM983333_p15 hypothetical protein phrog_16121 unknown function unknown function 1 8923 9297
AJA42942.1 KM983333_p56 hypothetical protein phrog_8907 unknown function unknown function 1 36322 36576
AJA42903.1 KM983333_p17 hypothetical protein phrog_11269 unknown function unknown function 1 9804 10433
AJA42918.1 KM983333_p32 portal protein phrog_64 portal protein head and packaging 1 17918 19375
AJA42887.1 KM983333_p1 serine recombinase phrog_95 integrase integration and excision -1 37 1545
AJA42892.1 KM983333_p6 XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 3319 3534
AJA42952.1 KM983333_p66 hypothetical protein phrog_18586 unknown function unknown function 1 44580 45386
AJA42897.1 KM983333_p11 endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 5691 7034
AJA42888.1 KM983333_p2 hypothetical protein phrog_15901 unknown function unknown function -1 1568 1852
AJA42889.1 KM983333_p3 hypothetical protein phrog_5553 unknown function unknown function -1 1870 2214
AJA42937.1 KM983333_p51 hypothetical protein phrog_13713 unknown function unknown function 1 31241 31573
AJA42895.1 KM983333_p9 hypothetical protein phrog_15837 unknown function unknown function 1 4885 5019
AJA42951.1 KM983333_p65 hypothetical protein phrog_18087 unknown function unknown function 1 44219 44587
AJA42943.1 KM983333_p57 hypothetical protein phrog_7317 unknown function unknown function 1 36592 37590
AJA42926.1 KM983333_p40 hypothetical protein phrog_5133 unknown function unknown function 1 24177 24365
AJA42925.1 KM983333_p39 major capsid protein phrog_29 major head protein head and packaging 1 23087 24121
AJA42936.1 KM983333_p50 hypothetical protein phrog_1887 tail protein tail 1 30144 31241
AJA42904.1 KM983333_p18 hypothetical protein phrog_19436 unknown function unknown function 1 10447 10545
AJA42917.1 KM983333_p31 terminase large subunit phrog_2 terminase large subunit head and packaging 1 16575 17918
AJA42894.1 KM983333_p8 hypothetical protein phrog_15040 unknown function unknown function -1 4386 4760
AJA42915.1 KM983333_p29 hypothetical protein phrog_19778 unknown function unknown function 1 14528 15616
AJA42946.1 KM983333_p60 hypothetical protein phrog_21039 unknown function unknown function 1 39738 40472
AJA42953.1 KM983333_p67 DNA polymerase III subunit epsilon phrog_14632 DNA polymerase DNA, RNA and nucleotide metabolism 1 45739 46881
AJA42938.1 KM983333_p52 hypothetical protein phrog_6376 unknown function unknown function 1 31586 32146
AJA42899.1 KM983333_p13 hypothetical protein phrog_10625 unknown function unknown function 1 7835 8014
AJA42910.1 KM983333_p24 XRE family transcriptional regulator phrog_14101 transcriptional regulator transcription regulation 1 12253 12564
AJA42908.1 KM983333_p22 hypothetical protein phrog_9430 unknown function unknown function 1 11875 12015
AJA42890.1 KM983333_p4 hypothetical protein phrog_87 metallo-protease other -1 2241 2699
AJA42922.1 KM983333_p36 hypothetical protein phrog_1048 unknown function unknown function 1 21903 22103
AJA42896.1 KM983333_p10 hypothetical protein phrog_16982 unknown function unknown function 1 5174 5605
AJA42900.1 KM983333_p14 replication protein DnaD phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 8032 8910
AJA42907.1 KM983333_p21 hypothetical protein phrog_1455 unknown function unknown function 1 11675 11872
AJA42914.1 KM983333_p28 hypothetical protein phrog_17522 unknown function unknown function 1 13957 14157
AJA42933.1 KM983333_p47 hypothetical protein phrog_6541 unknown function unknown function 1 27098 27313
AJA42927.1 KM983333_p41 hypothetical protein phrog_4020 unknown function unknown function 1 24368 24670
AJA42913.1 KM983333_p27 hypothetical protein phrog_18632 unknown function unknown function 1 13688 13930
AJA42919.1 KM983333_p33 membrane spanning protein phrog_21287 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 19432 19905
AJA42898.1 KM983333_p12 RecT family recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7036 7842
AJA42902.1 KM983333_p16 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9379 9807
AJA42945.1 KM983333_p59 hypothetical protein phrog_10667 unknown function unknown function 1 38759 39544
AJA42916.1 KM983333_p30 terminase small subunit phrog_2606 terminase small subunit head and packaging 1 15662 16585
AJA42911.1 KM983333_p25 siderophore-interacting protein phrog_36 transcriptional regulator transcription regulation 1 12576 13043
AJA42930.1 KM983333_p44 hypothetical protein phrog_7585 unknown function unknown function 1 25386 25805
AJA42891.1 KM983333_p5 Cro/Cl-type repressor phrog_8 transcriptional regulator transcription regulation -1 2715 3158
AJA42921.1 KM983333_p35 hypothetical protein phrog_19570 unknown function unknown function 1 21639 21839
AJA42924.1 KM983333_p38 hypothetical protein phrog_909 major head protein head and packaging 1 22735 23067