Genomic map of Clostridium phage phiCTC2B (KM983334)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KM983334
Definition
Clostridium phage phiCTC2B, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
PVOG
Length
38243
Host Name
Clostridium tetani
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
29.05
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJA42964.1 KM983334_p11 endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 5158 6078
AJA42977.1 KM983334_p24 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 11251 11766
AJA42975.1 KM983334_p22 hypothetical protein phrog_9430 unknown function unknown function 1 10865 11005
AJA42973.1 KM983334_p20 hypothetical protein phrog_3497 unknown function unknown function 1 10004 10366
AJA42991.1 KM983334_p38 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 19869 20228
AJA42970.1 KM983334_p17 hypothetical protein phrog_13235 unknown function unknown function 1 8666 8797
AJA42965.1 KM983334_p12 RecT family recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6080 6886
AJA42990.1 KM983334_p37 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 19582 19860
AJA43017.1 KM983334_p64 Cro/CI family transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 37116 37352
AJA43014.1 KM983334_p61 N-acetylmuramoyl-L-alanine amidase phrog_10967 endolysin lysis 1 34935 35735
AJA42982.1 KM983334_p29 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 13377 13559
AJA42960.1 KM983334_p7 hypothetical protein phrog_21773 unknown function unknown function 1 3758 4129
AJA43002.1 KM983334_p49 cell wall hydrolase phrog_400 tail protein tail 1 27120 28214
AJA42999.1 KM983334_p46 hypothetical protein phrog_18851 unknown function unknown function 1 23645 24022
AJA42984.1 KM983334_p31 terminase small subunit phrog_83 terminase small subunit head and packaging 1 14185 14646
AJA42994.1 KM983334_p41 hypothetical protein phrog_525 unknown function unknown function 1 20924 21352
AJA42963.1 KM983334_p10 hypothetical protein phrog_21907 unknown function unknown function 1 4734 5129
AJA43012.1 KM983334_p59 XhlA hemolysin phrog_1193 hemolysin other 1 34420 34653
AJA42986.1 KM983334_p33 portal protein phrog_12 portal protein head and packaging 1 16346 17578
AJA43013.1 KM983334_p60 holin phrog_1129 holin lysis 1 34665 34934
AJA42978.1 KM983334_p25 hypothetical protein phrog_10757 unknown function unknown function 1 11778 11930
AJA43004.1 KM983334_p51 xkdS-like protein phrog_120 baseplate wedge subunit tail 1 28458 28898
AJA42968.1 KM983334_p15 hypothetical protein phrog_16451 unknown function unknown function 1 7986 8240
AJA43015.1 KM983334_p62 hypothetical protein phrog_1281 unknown function unknown function 1 35928 36599
AJA43009.1 KM983334_p56 hypothetical protein phrog_20086 unknown function unknown function 1 32520 32897
AJA42955.1 KM983334_p2 XRE family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 1502 1912
AJA42993.1 KM983334_p40 hypothetical protein phrog_18448 unknown function unknown function 1 20643 20873
AJA42969.1 KM983334_p16 hypothetical protein phrog_2245 nucleoside triphosphate pyrophosphohydrolase other 1 8253 8660
AJA42985.1 KM983334_p32 terminase large subunit phrog_9 terminase large subunit head and packaging 1 14643 16334
AJA42958.1 KM983334_p5 anti-repressor phrog_373 anti-repressor transcription regulation 1 2706 3455
AJA43010.1 KM983334_p57 hypothetical protein phrog_20843 unknown function unknown function 1 32900 33958
AJA43008.1 KM983334_p55 hypothetical protein phrog_521 tail protein tail 1 31861 32520
AJA42981.1 KM983334_p28 pilus assembly protein HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 12912 13319
AJA42954.1 KM983334_p1 serine recombinase phrog_95 integrase integration and excision -1 38193 38243
AJA42954.1 KM983334_p1 serine recombinase phrog_95 integrase integration and excision -1 1 1479
AJA42957.1 KM983334_p4 hypothetical protein phrog_17201 unknown function unknown function 1 2366 2539
AJA42976.1 KM983334_p23 hypothetical protein phrog_15483 unknown function unknown function 1 11002 11226
AJA42956.1 KM983334_p3 Cro/Cl family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 2140 2355
AJA43019.1 KM983334_p66 hypothetical protein phrog_15134 unknown function unknown function 1 37865 38152
AJA43006.1 KM983334_p53 tail fiber protein phrog_18608 unknown function unknown function 1 29949 31199
AJA43016.1 KM983334_p63 xkdS-like protein phrog_13386 unknown function unknown function 1 36600 37067
AJA42983.1 KM983334_p30 HNH endonuclease family protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13681 14109
AJA43005.1 KM983334_p52 baseplate J protein phrog_6 baseplate wedge subunit tail 1 28891 29952
AJA42974.1 KM983334_p21 YopX-like protein phrog_98 unknown function unknown function 1 10473 10862
AJA43007.1 KM983334_p54 hypothetical protein phrog_20528 unknown function unknown function 1 31210 31857
AJA42998.1 KM983334_p45 XkdN-like protein phrog_389 tail protein XkdN-like tail 1 23048 23458
AJA42987.1 KM983334_p34 clp protease family protein phrog_94 head maturation protease head and packaging 1 17575 18255
AJA42959.1 KM983334_p6 hypothetical protein phrog_6593 unknown function unknown function 1 3541 3753
AJA42979.1 KM983334_p26 hypothetical protein phrog_16875 unknown function unknown function 1 12294 12536
AJA43001.1 KM983334_p48 XkdP-like protein phrog_5184 unknown function unknown function 1 26704 27123
AJA42967.1 KM983334_p14 replication protein DnaD phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7076 7972
AJA42988.1 KM983334_p35 major capsid protein phrog_10 major head protein head and packaging 1 18287 19393
AJA42966.1 KM983334_p13 hypothetical protein phrog_10625 unknown function unknown function 1 6879 7058
AJA42971.1 KM983334_p18 replication terminator protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 8797 9180
AJA42995.1 KM983334_p42 xkdK-like tail sheath protein phrog_1480 tail sheath tail 1 21357 22418
AJA42962.1 KM983334_p9 hypothetical protein phrog_11013 unknown function unknown function 1 4386 4649
AJA42980.1 KM983334_p27 hypothetical protein phrog_3928 unknown function unknown function 1 12490 12666
AJA43018.1 KM983334_p65 CopG family transcriptional regulator phrog_3180 Arc-like repressor transcription regulation 1 37513 37665
AJA42996.1 KM983334_p43 XkdM-like protein phrog_365 tail protein tail 1 22438 22869
AJA42989.1 KM983334_p36 hypothetical protein phrog_2616 unknown function unknown function 1 19436 19573
AJA42972.1 KM983334_p19 hypothetical protein phrog_1029 unknown function unknown function 1 9204 9920
AJA42997.1 KM983334_p44 hypothetical protein phrog_15580 unknown function unknown function 1 22894 23046
AJA42992.1 KM983334_p39 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20218 20634
AJA43003.1 KM983334_p50 hypothetical protein phrog_579 unknown function unknown function 1 28240 28455
AJA42961.1 KM983334_p8 hypothetical protein phrog_20935 unknown function unknown function 1 4237 4392
AJA43011.1 KM983334_p58 hypothetical protein phrog_19726 unknown function unknown function 1 34072 34347
AJA43000.1 KM983334_p47 tail-tape measure protein phrog_991 tail length tape measure protein tail 1 24076 26658