| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP027195 |
Definition |
Mycobacterium phage Cosmo, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wildcatvirus; unclassified Wildcatvirus. |
DB of origin |
PVOG |
Length |
78229 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
148 |
%GC |
56.84 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AJD82108.1 | KP027195_p36 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 16954 | 17720 |
| AJD82126.1 | KP027195_p54 | hypothetical protein | phrog_26540 | unknown function | unknown function | -1 | 39685 | 39990 |
| AJD82079.1 | KP027195_p7 | hypothetical protein | phrog_35797 | unknown function | unknown function | -1 | 1262 | 1537 |
| AJD82106.1 | KP027195_p34 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 15372 | 15884 |
| AJD82174.1 | KP027195_p102 | hypothetical protein | phrog_37907 | unknown function | unknown function | 1 | 60016 | 60102 |
| AJD82176.1 | KP027195_p104 | hypothetical protein | phrog_22530 | unknown function | unknown function | -1 | 62657 | 63019 |
| AJD82116.1 | KP027195_p44 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 30914 | 32890 |
| AJD82202.1 | KP027195_p130 | hypothetical protein | phrog_24245 | unknown function | unknown function | -1 | 70231 | 70485 |
| AJD82216.1 | KP027195_p144 | hypothetical protein | phrog_21856 | unknown function | unknown function | -1 | 75236 | 75529 |
| AJD82112.1 | KP027195_p40 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 25304 | 27688 |
| AJD82213.1 | KP027195_p141 | hypothetical protein | phrog_23229 | unknown function | unknown function | -1 | 74176 | 74451 |
| AJD82158.1 | KP027195_p86 | WhiB | phrog_10071 | transcriptional regulator WhiB-like | transcription regulation | 1 | 52813 | 53370 |
| AJD82090.1 | KP027195_p18 | hypothetical protein | phrog_29366 | unknown function | unknown function | -1 | 5564 | 5866 |
| AJD82120.1 | KP027195_p48 | hypothetical protein | phrog_23111 | unknown function | unknown function | 1 | 35925 | 36290 |
| AJD82095.1 | KP027195_p23 | hypothetical protein | phrog_23221 | unknown function | unknown function | -1 | 7009 | 7338 |
| AJD82205.1 | KP027195_p133 | hypothetical protein | phrog_24893 | unknown function | unknown function | -1 | 71218 | 71427 |
| AJD82118.1 | KP027195_p46 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 35023 | 35430 |
| AJD82154.1 | KP027195_p82 | hypothetical protein | phrog_25203 | unknown function | unknown function | 1 | 51657 | 51917 |
| AJD82152.1 | KP027195_p80 | Dna B-like helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50010 | 51335 |
| AJD82129.1 | KP027195_p57 | hypothetical protein | phrog_25997 | unknown function | unknown function | -1 | 40548 | 40781 |
| AJD82097.1 | KP027195_p25 | hypothetical protein | phrog_1496 | terminase small subunit | head and packaging | 1 | 7720 | 8109 |
| AJD82102.1 | KP027195_p30 | capsid protein | phrog_283 | major head protein | head and packaging | 1 | 12978 | 14156 |
| AJD82203.1 | KP027195_p131 | hypothetical protein | phrog_24642 | unknown function | unknown function | -1 | 70485 | 70889 |
| AJD82093.1 | KP027195_p21 | hypothetical protein | phrog_26122 | unknown function | unknown function | -1 | 6325 | 6588 |
| AJD82113.1 | KP027195_p41 | hypothetical protein | phrog_27557 | unknown function | unknown function | 1 | 27704 | 27877 |
| AJD82117.1 | KP027195_p45 | minor tail protein | phrog_13352 | minor tail protein | tail | 1 | 32890 | 35013 |
| AJD82098.1 | KP027195_p26 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 8131 | 9744 |
| AJD82193.1 | KP027195_p121 | hypothetical protein | phrog_26559 | unknown function | unknown function | -1 | 68189 | 68458 |
| AJD82157.1 | KP027195_p85 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52400 | 52804 |
| AJD82191.1 | KP027195_p119 | hypothetical protein | phrog_889 | unknown function | unknown function | -1 | 67452 | 68009 |
| AJD82144.1 | KP027195_p72 | hypothetical protein | phrog_10000 | unknown function | unknown function | 1 | 46726 | 47109 |
| AJD82177.1 | KP027195_p105 | hypothetical protein | phrog_27261 | unknown function | unknown function | 1 | 63374 | 63619 |
| AJD82151.1 | KP027195_p79 | hypothetical protein | phrog_10293 | unknown function | unknown function | 1 | 49558 | 50049 |
| AJD82212.1 | KP027195_p140 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 73749 | 74069 |
| AJD82200.1 | KP027195_p128 | hypothetical protein | phrog_12268 | unknown function | unknown function | -1 | 69688 | 70023 |
| AJD82092.1 | KP027195_p20 | hypothetical protein | phrog_23964 | unknown function | unknown function | -1 | 6074 | 6328 |
| AJD82122.1 | KP027195_p50 | hypothetical protein | phrog_26638 | unknown function | unknown function | 1 | 37798 | 37953 |
| AJD82164.1 | KP027195_p92 | hypothetical protein | phrog_26394 | unknown function | unknown function | 1 | 56110 | 56238 |
| AJD82209.1 | KP027195_p137 | hypothetical protein | phrog_25376 | unknown function | unknown function | -1 | 72559 | 72831 |
| AJD82119.1 | KP027195_p47 | hypothetical protein | phrog_25442 | unknown function | unknown function | 1 | 35440 | 35925 |
| AJD82074.1 | KP027195_p2 | hypothetical protein | phrog_12168 | unknown function | unknown function | -1 | 265 | 474 |
| AJD82201.1 | KP027195_p129 | hypothetical protein | phrog_10520 | unknown function | unknown function | -1 | 70016 | 70231 |
| AJD82169.1 | KP027195_p97 | hypothetical protein | phrog_4974 | unknown function | unknown function | 1 | 57537 | 57701 |
| AJD82080.1 | KP027195_p8 | PolyA polymerase | phrog_2244 | tRNA nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 1537 | 2742 |
| AJD82185.1 | KP027195_p113 | phosphoesterase | phrog_547 | phosphoesterase | other | 1 | 65501 | 66262 |
| AJD82141.1 | KP027195_p69 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 45597 | 46154 |
| AJD82086.1 | KP027195_p14 | hypothetical protein | phrog_27165 | unknown function | unknown function | -1 | 4616 | 4750 |
| AJD82190.1 | KP027195_p118 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 67273 | 67452 |
| AJD82076.1 | KP027195_p4 | hypothetical protein | phrog_17151 | unknown function | unknown function | -1 | 735 | 851 |
| AJD82187.1 | KP027195_p115 | hypothetical protein | phrog_22794 | unknown function | unknown function | 1 | 66399 | 66584 |
| AJD82121.1 | KP027195_p49 | lysin A | phrog_700 | endolysin | lysis | 1 | 36293 | 37801 |
| AJD82172.1 | KP027195_p100 | HNH endonuclease domain protein | phrog_4234 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58504 | 58896 |
| AJD82171.1 | KP027195_p99 | hypothetical protein | phrog_26329 | unknown function | unknown function | 1 | 58068 | 58292 |
| AJD82159.1 | KP027195_p87 | hypothetical protein | phrog_4160 | unknown function | unknown function | 1 | 53401 | 53880 |
| AJD82204.1 | KP027195_p132 | hypothetical protein | phrog_24436 | unknown function | unknown function | -1 | 70992 | 71216 |
| AJD82088.1 | KP027195_p16 | hypothetical protein | phrog_22686 | unknown function | unknown function | -1 | 5054 | 5203 |
| AJD82134.1 | KP027195_p62 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 42663 | 42830 |
| AJD82099.1 | KP027195_p27 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9741 | 11180 |
| AJD82186.1 | KP027195_p114 | hypothetical protein | phrog_22097 | unknown function | unknown function | 1 | 66268 | 66402 |
| AJD82073.1 | KP027195_p1 | hypothetical protein | phrog_27721 | unknown function | unknown function | -1 | 48 | 263 |
| AJD82128.1 | KP027195_p56 | hypothetical protein | phrog_24609 | unknown function | unknown function | -1 | 40252 | 40551 |
| AJD82162.1 | KP027195_p90 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 54975 | 55226 |
| AJD82156.1 | KP027195_p84 | hypothetical protein | phrog_24779 | unknown function | unknown function | 1 | 52150 | 52410 |
| AJD82167.1 | KP027195_p95 | hypothetical protein | phrog_24191 | unknown function | unknown function | 1 | 57041 | 57289 |
| AJD82107.1 | KP027195_p35 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 15894 | 16805 |
| AJD82195.1 | KP027195_p123 | hypothetical protein | phrog_10592 | unknown function | unknown function | -1 | 68742 | 69083 |
| AJD82173.1 | KP027195_p101 | hypothetical protein | phrog_27665 | unknown function | unknown function | 1 | 59561 | 59734 |
| AJD82170.1 | KP027195_p98 | HNH endonuclease domain protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57711 | 58028 |
| AJD82183.1 | KP027195_p111 | hypothetical protein | phrog_36928 | unknown function | unknown function | 1 | 64766 | 64984 |
| AJD82168.1 | KP027195_p96 | hypothetical protein | phrog_11565 | unknown function | unknown function | 1 | 57286 | 57444 |
| AJD82206.1 | KP027195_p134 | hypothetical protein | phrog_25528 | unknown function | unknown function | -1 | 71497 | 71829 |
| AJD82153.1 | KP027195_p81 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51319 | 51657 |
| AJD82199.1 | KP027195_p127 | hypothetical protein | phrog_26051 | unknown function | unknown function | -1 | 69467 | 69688 |
| AJD82130.1 | KP027195_p58 | NrdC | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 40769 | 41518 |
| AJD82150.1 | KP027195_p78 | ssDNA binding domain protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 49156 | 49545 |
| AJD82155.1 | KP027195_p83 | hypothetical protein | phrog_23849 | unknown function | unknown function | 1 | 51917 | 52150 |
| AJD82214.1 | KP027195_p142 | hypothetical protein | phrog_28867 | unknown function | unknown function | -1 | 74453 | 74737 |
| AJD82198.1 | KP027195_p126 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 69320 | 69454 |
| AJD82111.1 | KP027195_p39 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 23712 | 25307 |
| AJD82083.1 | KP027195_p11 | methyltransferase | phrog_21658 | methyltransferase | other | -1 | 3473 | 4156 |
| AJD82096.1 | KP027195_p24 | hypothetical protein | phrog_22928 | unknown function | unknown function | 1 | 7416 | 7736 |
| AJD82138.1 | KP027195_p66 | hypothetical protein | phrog_24344 | unknown function | unknown function | 1 | 44127 | 44462 |
| AJD82075.1 | KP027195_p3 | hypothetical protein | phrog_34865 | unknown function | unknown function | -1 | 471 | 683 |
| AJD82180.1 | KP027195_p108 | hypothetical protein | phrog_29580 | unknown function | unknown function | 1 | 63909 | 64136 |
| AJD82197.1 | KP027195_p125 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69243 | 69323 |
| AJD82133.1 | KP027195_p61 | hypothetical protein | phrog_35421 | unknown function | unknown function | 1 | 42421 | 42666 |
| AJD82161.1 | KP027195_p89 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 54301 | 54978 |
| AJD82078.1 | KP027195_p6 | hypothetical protein | phrog_9124 | unknown function | unknown function | -1 | 1045 | 1245 |
| AJD82110.1 | KP027195_p38 | tapemeaure | phrog_3547 | tail length tape measure protein | tail | 1 | 17728 | 23703 |
| AJD82114.1 | KP027195_p42 | hypothetical protein | phrog_4413 | minor tail protein | tail | 1 | 27879 | 28346 |
| AJD82100.1 | KP027195_p28 | capsid assembly protease | phrog_193 | head maturation protease | head and packaging | 1 | 11185 | 12219 |
| AJD82196.1 | KP027195_p124 | hypothetical protein | phrog_23233 | unknown function | unknown function | -1 | 69088 | 69246 |
| AJD82211.1 | KP027195_p139 | hypothetical protein | phrog_16548 | unknown function | unknown function | -1 | 73277 | 73642 |
| AJD82145.1 | KP027195_p73 | hypothetical protein | phrog_10063 | unknown function | unknown function | 1 | 47116 | 47517 |
| AJD82163.1 | KP027195_p91 | DNA Q-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 55237 | 56079 |
| AJD82135.1 | KP027195_p63 | hypothetical protein | phrog_30069 | unknown function | unknown function | 1 | 42827 | 43192 |
| AJD82140.1 | KP027195_p68 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44692 | 45597 |
| AJD82084.1 | KP027195_p12 | hypothetical protein | phrog_24080 | unknown function | unknown function | -1 | 4153 | 4389 |
| AJD82207.1 | KP027195_p135 | hypothetical protein | phrog_24674 | unknown function | unknown function | -1 | 71919 | 72200 |
| AJD82179.1 | KP027195_p107 | hypothetical protein | phrog_30169 | unknown function | unknown function | 1 | 63759 | 63893 |
| AJD82143.1 | KP027195_p71 | hypothetical protein | phrog_27342 | unknown function | unknown function | 1 | 46467 | 46757 |
| AJD82220.1 | KP027195_p148 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76553 | 76738 |
| AJD82091.1 | KP027195_p19 | hypothetical protein | phrog_27010 | unknown function | unknown function | -1 | 5922 | 6077 |
| AJD82146.1 | KP027195_p74 | hypothetical protein | phrog_26531 | unknown function | unknown function | 1 | 47510 | 47962 |
| AJD82160.1 | KP027195_p88 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 53908 | 54264 |
| AJD82136.1 | KP027195_p64 | hypothetical protein | phrog_11487 | unknown function | unknown function | 1 | 43143 | 43493 |
| AJD82087.1 | KP027195_p15 | hypothetical protein | phrog_22366 | unknown function | unknown function | -1 | 4747 | 5061 |
| AJD82137.1 | KP027195_p65 | Erf | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43493 | 44125 |
| AJD82142.1 | KP027195_p70 | hypothetical protein | phrog_22883 | unknown function | unknown function | 1 | 46225 | 46467 |
| AJD82081.1 | KP027195_p9 | hypothetical protein | phrog_27092 | unknown function | unknown function | -1 | 2739 | 3242 |
| AJD82192.1 | KP027195_p120 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68064 | 68192 |
| AJD82148.1 | KP027195_p76 | hypothetical protein | phrog_22095 | unknown function | unknown function | 1 | 48580 | 48816 |
| AJD82165.1 | KP027195_p93 | hypothetical protein | phrog_27046 | unknown function | unknown function | 1 | 56240 | 56563 |
| AJD82175.1 | KP027195_p103 | HNH endonuclease | phrog_3106 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61707 | 61874 |
| AJD82194.1 | KP027195_p122 | hypothetical protein | phrog_1338 | unknown function | unknown function | -1 | 68462 | 68740 |
| AJD82149.1 | KP027195_p77 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48788 | 49153 |
| AJD82182.1 | KP027195_p110 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 64335 | 64769 |
| AJD82124.1 | KP027195_p52 | lysin B | phrog_102 | endolysin | lysis | 1 | 38381 | 39346 |
| AJD82178.1 | KP027195_p106 | hypothetical protein | phrog_28772 | unknown function | unknown function | 1 | 63606 | 63755 |
| AJD82104.1 | KP027195_p32 | hypothetical protein | phrog_10309 | head-tail connector protein | connector | 1 | 14642 | 14983 |
| AJD82094.1 | KP027195_p22 | hypothetical protein | phrog_24798 | unknown function | unknown function | -1 | 6585 | 6959 |
| AJD82127.1 | KP027195_p55 | hypothetical protein | phrog_26307 | unknown function | unknown function | -1 | 39987 | 40259 |
| AJD82188.1 | KP027195_p116 | hypothetical protein | phrog_37276 | unknown function | unknown function | 1 | 66594 | 66911 |
| AJD82082.1 | KP027195_p10 | hypothetical protein | phrog_23995 | unknown function | unknown function | -1 | 3243 | 3476 |
| AJD82218.1 | KP027195_p146 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 75848 | 76060 |
| AJD82123.1 | KP027195_p51 | holin | phrog_2879 | holin | lysis | 1 | 37950 | 38381 |
| AJD82208.1 | KP027195_p136 | hypothetical protein | phrog_7443 | unknown function | unknown function | -1 | 72293 | 72562 |
| AJD82189.1 | KP027195_p117 | hypothetical protein | phrog_3491 | unknown function | unknown function | 1 | 66908 | 67126 |
| AJD82085.1 | KP027195_p13 | LexA-like DNA binding domain protein | phrog_3502 | unknown function | unknown function | -1 | 4386 | 4619 |
| AJD82109.1 | KP027195_p37 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 16954 | 17298 |
| AJD82181.1 | KP027195_p109 | hypothetical protein | phrog_38831 | unknown function | unknown function | 1 | 64147 | 64338 |
| AJD82089.1 | KP027195_p17 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 5200 | 5547 |
| AJD82184.1 | KP027195_p112 | DnaQ-like protein | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64981 | 65496 |
| AJD82217.1 | KP027195_p145 | hypothetical protein | phrog_38022 | unknown function | unknown function | -1 | 75635 | 75817 |
| AJD82077.1 | KP027195_p5 | hypothetical protein | phrog_37681 | unknown function | unknown function | -1 | 848 | 1048 |
| AJD82147.1 | KP027195_p75 | hypothetical protein | phrog_24005 | unknown function | unknown function | 1 | 48019 | 48576 |
| AJD82215.1 | KP027195_p143 | hypothetical protein | phrog_26585 | unknown function | unknown function | -1 | 74857 | 75120 |
| AJD82132.1 | KP027195_p60 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 42125 | 42424 |
| AJD82139.1 | KP027195_p67 | hypothetical protein | phrog_9881 | unknown function | unknown function | 1 | 44462 | 44665 |
| AJD82219.1 | KP027195_p147 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76264 | 76359 |
| AJD82103.1 | KP027195_p31 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 14169 | 14645 |
| AJD82125.1 | KP027195_p53 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 39361 | 39609 |
| AJD82101.1 | KP027195_p29 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 12274 | 12927 |
| AJD82131.1 | KP027195_p59 | hypothetical protein | phrog_6736 | unknown function | unknown function | -1 | 41511 | 41777 |
| AJD82115.1 | KP027195_p43 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 28347 | 30914 |
| AJD82210.1 | KP027195_p138 | hypothetical protein | phrog_15017 | unknown function | unknown function | -1 | 72920 | 73171 |
| AJD82105.1 | KP027195_p33 | hypothetical protein | phrog_5210 | neck protein | connector | 1 | 14967 | 15362 |
| AJD82166.1 | KP027195_p94 | tyrosine phosphatase | phrog_10650 | dual specificity phosphatase | other | 1 | 56556 | 57053 |