Genomic map of Mycobacterium phage Chandler (KP027207)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP027207
Definition
Mycobacterium phage Chandler, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
PVOG
Length
69451
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
67.51
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJD82634.1 KP027207_p44 DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39807 40244
AJD82636.1 KP027207_p46 lysin A phrog_700 endolysin lysis 1 41050 42315
AJD82686.1 KP027207_p97 hypothetical protein phrog_1221 unknown function unknown function -1 66626 67738
AJD82624.1 KP027207_p34 hypothetical protein phrog_240 head protein head and packaging 1 34231 34614
AJD82605.1 KP027207_p15 hypothetical protein phrog_779 unknown function unknown function 1 13914 14723
AJD82614.1 KP027207_p24 hypothetical protein phrog_810 unknown function unknown function 1 19250 19771
AJD82623.1 KP027207_p33 minor tail protein phrog_416 minor tail protein tail 1 33002 34204
AJD82671.1 KP027207_p82 hypothetical protein phrog_6304 unknown function unknown function -1 62139 62303
AJD82640.1 KP027207_p50 hypothetical protein phrog_7519 unknown function unknown function -1 45657 45878
AJD82651.1 KP027207_p62 hypothetical protein phrog_993 unknown function unknown function -1 55313 55789
AJD82627.1 KP027207_p37 hypothetical protein phrog_282 unknown function unknown function 1 35709 36308
AJD82684.1 KP027207_p95 hypothetical protein phrog_6469 unknown function unknown function -1 65499 65966
AJD82675.1 KP027207_p86 hypothetical protein phrog_7541 unknown function unknown function -1 62971 63303
AJD82655.1 KP027207_p66 hypothetical protein phrog_982 unknown function unknown function -1 56599 56868
AJD82665.1 KP027207_p76 hypothetical protein phrog_6229 unknown function unknown function 1 60332 60679
AJD82663.1 KP027207_p74 hypothetical protein phrog_1306 unknown function unknown function -1 59980 60114
AJD82691.1 KP027207_p102 hypothetical protein phrog_6432 unknown function unknown function 1 68880 69035
AJD82633.1 KP027207_p43 DNA binding domain protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39574 39810
AJD82673.1 KP027207_p84 hypothetical protein phrog_6338 unknown function unknown function -1 62467 62625
AJD82662.1 KP027207_p73 hypothetical protein phrog_4885 unknown function unknown function 1 59710 59967
AJD82612.1 KP027207_p22 hypothetical protein phrog_6514 unknown function unknown function -1 18272 18382
AJD82667.1 KP027207_p78 hypothetical protein phrog_4974 unknown function unknown function -1 61201 61389
AJD82676.1 KP027207_p87 hypothetical protein phrog_7414 unknown function unknown function -1 63300 63587
AJD82606.1 KP027207_p16 hypothetical protein phrog_970 unknown function unknown function 1 14738 15343
AJD82625.1 KP027207_p35 hypothetical protein phrog_948 unknown function unknown function 1 34623 35048
AJD82598.1 KP027207_p8 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 5625 6176
AJD82596.1 KP027207_p6 terminase phrog_38 terminase large subunit head and packaging 1 2696 5236
AJD82620.1 KP027207_p30 minor tail protein phrog_837 minor tail protein tail 1 28353 29396
AJD82664.1 KP027207_p75 hypothetical protein phrog_6511 unknown function unknown function 1 60169 60321
AJD82599.1 KP027207_p9 hypothetical protein phrog_6276 unknown function unknown function -1 6311 6607
AJD82658.1 KP027207_p69 hypothetical protein phrog_6404 unknown function unknown function 1 58310 58540
AJD82635.1 KP027207_p45 hypothetical protein phrog_636 unknown function unknown function -1 40289 40987
AJD82688.1 KP027207_p99 hypothetical protein phrog_4825 unknown function unknown function 1 68226 68399
AJD82641.1 KP027207_p52 type III restriction helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 46240 48039
AJD82693.1 KP027207_p51 hypothetical protein phrog_780 unknown function unknown function -1 45925 46194
AJD82666.1 KP027207_p77 DNA binding domain protein phrog_928 unknown function unknown function 1 60661 61188
AJD82601.1 KP027207_p11 hypothetical protein phrog_776 portal protein head and packaging 1 7077 8981
AJD82611.1 KP027207_p21 major tail protein phrog_792 major tail protein tail 1 17131 18210
AJD82681.1 KP027207_p92 hypothetical protein phrog_6428 unknown function unknown function -1 64731 64946
AJD82637.1 KP027207_p47 lysin B phrog_102 endolysin lysis 1 42316 43380
AJD82621.1 KP027207_p31 minor tail protein phrog_746 minor tail protein tail 1 29393 31621
AJD82647.1 KP027207_p58 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 52647 54464
AJD82648.1 KP027207_p59 hypothetical protein phrog_6482 unknown function unknown function -1 54464 54739
AJD82649.1 KP027207_p60 hypothetical protein phrog_6936 unknown function unknown function -1 54736 54873
AJD82685.1 KP027207_p96 hypothetical protein phrog_1010 unknown function unknown function -1 66064 66552
AJD82645.1 KP027207_p56 RepA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 49240 51843
AJD82600.1 KP027207_p10 hypothetical protein phrog_781 unknown function unknown function 1 6712 7047
AJD82618.1 KP027207_p28 tape measure protein phrog_934 tail length tape measure protein tail 1 21169 26916
AJD82677.1 KP027207_p88 hypothetical protein phrog_7490 unknown function unknown function -1 63584 63772
AJD82678.1 KP027207_p89 hypothetical protein phrog_2089 unknown function unknown function -1 63866 64060
AJD82646.1 KP027207_p57 hypothetical protein phrog_6342 unknown function unknown function -1 51877 52650
AJD82615.1 KP027207_p25 hypothetical protein phrog_901 unknown function unknown function 1 19782 20153
AJD82657.1 KP027207_p68 DNA binding domain protein phrog_1016 unknown function unknown function 1 58065 58313
AJD82597.1 KP027207_p7 hypothetical protein phrog_6317 unknown function unknown function -1 5377 5628
AJD82654.1 KP027207_p65 hypothetical protein phrog_6105 unknown function unknown function -1 56172 56522
AJD82660.1 KP027207_p71 HTH domain protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 58698 59297
AJD82638.1 KP027207_p48 hypothetical protein phrog_870 unknown function unknown function -1 43450 43995
AJD82616.1 KP027207_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20137 20550
AJD82669.1 KP027207_p80 HNH endonuclease phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61722 62051
AJD82592.1 KP027207_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
AJD82602.1 KP027207_p12 portal protein phrog_859 portal protein head and packaging 1 8971 11418
AJD82670.1 KP027207_p81 hypothetical protein phrog_4461 unknown function unknown function -1 62044 62142
AJD82628.1 KP027207_p38 hypothetical protein phrog_3329 unknown function unknown function 1 36305 37654
AJD82680.1 KP027207_p91 hypothetical protein phrog_6199 unknown function unknown function -1 64305 64688
AJD82668.1 KP027207_p79 hypothetical protein phrog_6691 unknown function unknown function -1 61444 61725
AJD82631.1 KP027207_p41 hypothetical protein phrog_892 tail fiber protein tail 1 38383 38793
AJD82595.1 KP027207_p5 ParB-like nuclease domain protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
AJD82650.1 KP027207_p61 hypothetical protein phrog_3025 unknown function unknown function -1 54870 55316
AJD82607.1 KP027207_p17 hypothetical protein phrog_565 holin lysis 1 15340 15774
AJD82626.1 KP027207_p36 hypothetical protein phrog_282 unknown function unknown function 1 35059 35712
AJD82622.1 KP027207_p32 minor tail protein phrog_356 minor tail protein tail 1 31623 33005
AJD82652.1 KP027207_p63 hypothetical protein phrog_6735 unknown function unknown function -1 55789 55908
AJD82594.1 KP027207_p4 PAPS reductase-like domain protein phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
AJD82609.1 KP027207_p19 hypothetical protein phrog_2344 unknown function unknown function 1 16235 16714
AJD82683.1 KP027207_p94 hypothetical protein phrog_6114 unknown function unknown function -1 65323 65502
AJD82613.1 KP027207_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 18513 19253
AJD82608.1 KP027207_p18 hypothetical protein phrog_2272 unknown function unknown function 1 15777 16238
AJD82639.1 KP027207_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 44044 45657
AJD82692.2 KP027207_p103 hypothetical protein phrog_5930 unknown function unknown function 1 69058 69402
AJD82619.1 KP027207_p29 minor tail protein phrog_838 unknown function unknown function 1 26926 28356
AJD82682.1 KP027207_p93 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64943 65326
AJD82591.1 KP027207_p1 ParB-like nuclease domain protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
AJD82644.1 KP027207_p55 hypothetical protein phrog_1371 unknown function unknown function -1 48724 49197
AJD82679.1 KP027207_p90 hypothetical protein phrog_5355 unknown function unknown function -1 64075 64230
AJD82642.1 KP027207_p53 hypothetical protein phrog_6400 unknown function unknown function -1 48036 48398
AJD82674.1 KP027207_p85 hypothetical protein phrog_4392 unknown function unknown function -1 62618 62974
AJD82653.1 KP027207_p64 hypothetical protein phrog_6656 unknown function unknown function -1 55945 56175
AJD82632.1 KP027207_p42 hydrolase domain protein phrog_2804 virion structural protein head and packaging 1 38793 39518
AJD82629.1 KP027207_p39 hypothetical protein phrog_915 unknown function unknown function 1 37677 38045
AJD82690.1 KP027207_p101 hypothetical protein phrog_6097 unknown function unknown function 1 68653 68889
AJD82672.1 KP027207_p83 hypothetical protein phrog_6460 unknown function unknown function -1 62300 62470
AJD82617.1 KP027207_p27 hypothetical protein phrog_1118 tail assembly chaperone tail 1 20589 21143
AJD82661.1 KP027207_p72 hypothetical protein phrog_1031 unknown function unknown function 1 59131 59706
AJD82656.2 KP027207_p67 hypothetical protein phrog_996 unknown function unknown function 1 57262 58029
AJD82643.1 KP027207_p54 hypothetical protein phrog_3892 unknown function unknown function -1 48398 48727
AJD82603.1 KP027207_p13 hypothetical protein phrog_25906 unknown function unknown function 1 11496 11627
AJD82593.1 KP027207_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1072
AJD82687.1 KP027207_p98 hypothetical protein phrog_2972 unknown function unknown function -1 67812 68048
AJD82659.1 KP027207_p70 hypothetical protein phrog_4938 unknown function unknown function 1 58537 58701
AJD82630.1 KP027207_p40 hypothetical protein phrog_941 unknown function unknown function 1 38129 38365
AJD82610.1 KP027207_p20 hypothetical protein phrog_2525 unknown function unknown function 1 16711 17043
AJD82604.1 KP027207_p14 major capsid protein phrog_777 major head protein head and packaging 1 11788 13815
AJD82689.1 KP027207_p100 hypothetical protein phrog_5733 unknown function unknown function 1 68411 68656