| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP027207 |
Definition |
Mycobacterium phage Chandler, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus. |
DB of origin |
PVOG |
Length |
69451 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
67.51 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AJD82634.1 | KP027207_p44 | DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39807 | 40244 |
| AJD82636.1 | KP027207_p46 | lysin A | phrog_700 | endolysin | lysis | 1 | 41050 | 42315 |
| AJD82686.1 | KP027207_p97 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 66626 | 67738 |
| AJD82624.1 | KP027207_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 34231 | 34614 |
| AJD82605.1 | KP027207_p15 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 13914 | 14723 |
| AJD82614.1 | KP027207_p24 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 19250 | 19771 |
| AJD82623.1 | KP027207_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 33002 | 34204 |
| AJD82671.1 | KP027207_p82 | hypothetical protein | phrog_6304 | unknown function | unknown function | -1 | 62139 | 62303 |
| AJD82640.1 | KP027207_p50 | hypothetical protein | phrog_7519 | unknown function | unknown function | -1 | 45657 | 45878 |
| AJD82651.1 | KP027207_p62 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 55313 | 55789 |
| AJD82627.1 | KP027207_p37 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35709 | 36308 |
| AJD82684.1 | KP027207_p95 | hypothetical protein | phrog_6469 | unknown function | unknown function | -1 | 65499 | 65966 |
| AJD82675.1 | KP027207_p86 | hypothetical protein | phrog_7541 | unknown function | unknown function | -1 | 62971 | 63303 |
| AJD82655.1 | KP027207_p66 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 56599 | 56868 |
| AJD82665.1 | KP027207_p76 | hypothetical protein | phrog_6229 | unknown function | unknown function | 1 | 60332 | 60679 |
| AJD82663.1 | KP027207_p74 | hypothetical protein | phrog_1306 | unknown function | unknown function | -1 | 59980 | 60114 |
| AJD82691.1 | KP027207_p102 | hypothetical protein | phrog_6432 | unknown function | unknown function | 1 | 68880 | 69035 |
| AJD82633.1 | KP027207_p43 | DNA binding domain protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39574 | 39810 |
| AJD82673.1 | KP027207_p84 | hypothetical protein | phrog_6338 | unknown function | unknown function | -1 | 62467 | 62625 |
| AJD82662.1 | KP027207_p73 | hypothetical protein | phrog_4885 | unknown function | unknown function | 1 | 59710 | 59967 |
| AJD82612.1 | KP027207_p22 | hypothetical protein | phrog_6514 | unknown function | unknown function | -1 | 18272 | 18382 |
| AJD82667.1 | KP027207_p78 | hypothetical protein | phrog_4974 | unknown function | unknown function | -1 | 61201 | 61389 |
| AJD82676.1 | KP027207_p87 | hypothetical protein | phrog_7414 | unknown function | unknown function | -1 | 63300 | 63587 |
| AJD82606.1 | KP027207_p16 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 14738 | 15343 |
| AJD82625.1 | KP027207_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 34623 | 35048 |
| AJD82598.1 | KP027207_p8 | RuvC-like resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 5625 | 6176 |
| AJD82596.1 | KP027207_p6 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 2696 | 5236 |
| AJD82620.1 | KP027207_p30 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 28353 | 29396 |
| AJD82664.1 | KP027207_p75 | hypothetical protein | phrog_6511 | unknown function | unknown function | 1 | 60169 | 60321 |
| AJD82599.1 | KP027207_p9 | hypothetical protein | phrog_6276 | unknown function | unknown function | -1 | 6311 | 6607 |
| AJD82658.1 | KP027207_p69 | hypothetical protein | phrog_6404 | unknown function | unknown function | 1 | 58310 | 58540 |
| AJD82635.1 | KP027207_p45 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 40289 | 40987 |
| AJD82688.1 | KP027207_p99 | hypothetical protein | phrog_4825 | unknown function | unknown function | 1 | 68226 | 68399 |
| AJD82641.1 | KP027207_p52 | type III restriction helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 46240 | 48039 |
| AJD82693.1 | KP027207_p51 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 45925 | 46194 |
| AJD82666.1 | KP027207_p77 | DNA binding domain protein | phrog_928 | unknown function | unknown function | 1 | 60661 | 61188 |
| AJD82601.1 | KP027207_p11 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 7077 | 8981 |
| AJD82611.1 | KP027207_p21 | major tail protein | phrog_792 | major tail protein | tail | 1 | 17131 | 18210 |
| AJD82681.1 | KP027207_p92 | hypothetical protein | phrog_6428 | unknown function | unknown function | -1 | 64731 | 64946 |
| AJD82637.1 | KP027207_p47 | lysin B | phrog_102 | endolysin | lysis | 1 | 42316 | 43380 |
| AJD82621.1 | KP027207_p31 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 29393 | 31621 |
| AJD82647.1 | KP027207_p58 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 52647 | 54464 |
| AJD82648.1 | KP027207_p59 | hypothetical protein | phrog_6482 | unknown function | unknown function | -1 | 54464 | 54739 |
| AJD82649.1 | KP027207_p60 | hypothetical protein | phrog_6936 | unknown function | unknown function | -1 | 54736 | 54873 |
| AJD82685.1 | KP027207_p96 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 66064 | 66552 |
| AJD82645.1 | KP027207_p56 | RepA | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 49240 | 51843 |
| AJD82600.1 | KP027207_p10 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 6712 | 7047 |
| AJD82618.1 | KP027207_p28 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 21169 | 26916 |
| AJD82677.1 | KP027207_p88 | hypothetical protein | phrog_7490 | unknown function | unknown function | -1 | 63584 | 63772 |
| AJD82678.1 | KP027207_p89 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 63866 | 64060 |
| AJD82646.1 | KP027207_p57 | hypothetical protein | phrog_6342 | unknown function | unknown function | -1 | 51877 | 52650 |
| AJD82615.1 | KP027207_p25 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 19782 | 20153 |
| AJD82657.1 | KP027207_p68 | DNA binding domain protein | phrog_1016 | unknown function | unknown function | 1 | 58065 | 58313 |
| AJD82597.1 | KP027207_p7 | hypothetical protein | phrog_6317 | unknown function | unknown function | -1 | 5377 | 5628 |
| AJD82654.1 | KP027207_p65 | hypothetical protein | phrog_6105 | unknown function | unknown function | -1 | 56172 | 56522 |
| AJD82660.1 | KP027207_p71 | HTH domain protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 58698 | 59297 |
| AJD82638.1 | KP027207_p48 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 43450 | 43995 |
| AJD82616.1 | KP027207_p26 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20137 | 20550 |
| AJD82669.1 | KP027207_p80 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 61722 | 62051 |
| AJD82592.1 | KP027207_p2 | hypothetical protein | phrog_6919 | unknown function | unknown function | 1 | 690 | 854 |
| AJD82602.1 | KP027207_p12 | portal protein | phrog_859 | portal protein | head and packaging | 1 | 8971 | 11418 |
| AJD82670.1 | KP027207_p81 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 62044 | 62142 |
| AJD82628.1 | KP027207_p38 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 36305 | 37654 |
| AJD82680.1 | KP027207_p91 | hypothetical protein | phrog_6199 | unknown function | unknown function | -1 | 64305 | 64688 |
| AJD82668.1 | KP027207_p79 | hypothetical protein | phrog_6691 | unknown function | unknown function | -1 | 61444 | 61725 |
| AJD82631.1 | KP027207_p41 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 38383 | 38793 |
| AJD82595.1 | KP027207_p5 | ParB-like nuclease domain protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 2148 | 2717 |
| AJD82650.1 | KP027207_p61 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 54870 | 55316 |
| AJD82607.1 | KP027207_p17 | hypothetical protein | phrog_565 | holin | lysis | 1 | 15340 | 15774 |
| AJD82626.1 | KP027207_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35059 | 35712 |
| AJD82622.1 | KP027207_p32 | minor tail protein | phrog_356 | minor tail protein | tail | 1 | 31623 | 33005 |
| AJD82652.1 | KP027207_p63 | hypothetical protein | phrog_6735 | unknown function | unknown function | -1 | 55789 | 55908 |
| AJD82594.1 | KP027207_p4 | PAPS reductase-like domain protein | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 1069 | 2151 |
| AJD82609.1 | KP027207_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 16235 | 16714 |
| AJD82683.1 | KP027207_p94 | hypothetical protein | phrog_6114 | unknown function | unknown function | -1 | 65323 | 65502 |
| AJD82613.1 | KP027207_p23 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 18513 | 19253 |
| AJD82608.1 | KP027207_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 15777 | 16238 |
| AJD82639.1 | KP027207_p49 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44044 | 45657 |
| AJD82692.2 | KP027207_p103 | hypothetical protein | phrog_5930 | unknown function | unknown function | 1 | 69058 | 69402 |
| AJD82619.1 | KP027207_p29 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 26926 | 28356 |
| AJD82682.1 | KP027207_p93 | hypothetical protein | phrog_5411 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64943 | 65326 |
| AJD82591.1 | KP027207_p1 | ParB-like nuclease domain protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 693 |
| AJD82644.1 | KP027207_p55 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 48724 | 49197 |
| AJD82679.1 | KP027207_p90 | hypothetical protein | phrog_5355 | unknown function | unknown function | -1 | 64075 | 64230 |
| AJD82642.1 | KP027207_p53 | hypothetical protein | phrog_6400 | unknown function | unknown function | -1 | 48036 | 48398 |
| AJD82674.1 | KP027207_p85 | hypothetical protein | phrog_4392 | unknown function | unknown function | -1 | 62618 | 62974 |
| AJD82653.1 | KP027207_p64 | hypothetical protein | phrog_6656 | unknown function | unknown function | -1 | 55945 | 56175 |
| AJD82632.1 | KP027207_p42 | hydrolase domain protein | phrog_2804 | virion structural protein | head and packaging | 1 | 38793 | 39518 |
| AJD82629.1 | KP027207_p39 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 37677 | 38045 |
| AJD82690.1 | KP027207_p101 | hypothetical protein | phrog_6097 | unknown function | unknown function | 1 | 68653 | 68889 |
| AJD82672.1 | KP027207_p83 | hypothetical protein | phrog_6460 | unknown function | unknown function | -1 | 62300 | 62470 |
| AJD82617.1 | KP027207_p27 | hypothetical protein | phrog_1118 | tail assembly chaperone | tail | 1 | 20589 | 21143 |
| AJD82661.1 | KP027207_p72 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 59131 | 59706 |
| AJD82656.2 | KP027207_p67 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 57262 | 58029 |
| AJD82643.1 | KP027207_p54 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 48398 | 48727 |
| AJD82603.1 | KP027207_p13 | hypothetical protein | phrog_25906 | unknown function | unknown function | 1 | 11496 | 11627 |
| AJD82593.1 | KP027207_p3 | hypothetical protein | phrog_6307 | unknown function | unknown function | 1 | 851 | 1072 |
| AJD82687.1 | KP027207_p98 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 67812 | 68048 |
| AJD82659.1 | KP027207_p70 | hypothetical protein | phrog_4938 | unknown function | unknown function | 1 | 58537 | 58701 |
| AJD82630.1 | KP027207_p40 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 38129 | 38365 |
| AJD82610.1 | KP027207_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 16711 | 17043 |
| AJD82604.1 | KP027207_p14 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 11788 | 13815 |
| AJD82689.1 | KP027207_p100 | hypothetical protein | phrog_5733 | unknown function | unknown function | 1 | 68411 | 68656 |