Genomic map of Mannheimia phage vB_MhS_3927AP1 (KP137439)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP137439
Definition
Mannheimia phage vB_MhS_3927AP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
52049
Host Name
Mannheimia haemolytica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
41.37
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJA73438.1 KP137439_p74 hypothetical protein phrog_25131 unknown function unknown function 1 49704 49820
AJA73431.1 KP137439_p67 hypothetical protein phrog_8506 unknown function unknown function 1 47122 47337
AJA73443.1 KP137439_p79 endolysin phrog_7 endolysin lysis 1 50588 51157
AJA73411.1 KP137439_p47 recombinase phrog_10056 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 34690 35484
AJA73390.1 KP137439_p26 tail assembly protein I phrog_32 tail assembly protein tail 1 16894 17523
AJA73445.1 KP137439_p81 lytic protein Rz1 phrog_456 Rz-like spanin lysis 1 51485 51658
AJA73376.1 KP137439_p12 hypothetical protein phrog_782 unknown function unknown function 1 8127 8507
AJA73384.1 KP137439_p20 tail length tape measure protein phrog_1538 tail length tape measure protein tail 1 11868 14363
AJA73400.1 KP137439_p36 hypothetical protein phrog_1229 unknown function unknown function -1 29127 29510
AJA73393.1 KP137439_p29 hypothetical protein phrog_22303 unknown function unknown function 1 25241 25390
AJA73368.1 KP137439_p4 head morphogenesis protein phrog_758 head morphogenesis head and packaging 1 3056 3994
AJA73391.1 KP137439_p27 host specificity protein J phrog_31 central tail fiber J tail 1 17533 24591
AJA73367.1 KP137439_p3 portal protein phrog_146 portal protein head and packaging 1 1726 3102
AJA73406.1 KP137439_p42 hypothetical protein phrog_1992 MazG-like pyrophosphatase other -1 32143 32607
AJA73397.1 KP137439_p33 hypothetical protein phrog_6098 unknown function unknown function 1 27334 27486
AJA73424.1 KP137439_p60 CI repressor phrog_4 transcriptional repressor transcription regulation -1 42686 43345
AJA73365.1 KP137439_p1 terminase, small subunit phrog_51 terminase small subunit head and packaging 1 1 525
AJA73394.1 KP137439_p30 hypothetical protein phrog_18203 unknown function unknown function 1 25383 25694
AJA73366.1 KP137439_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 509 1729
AJA73441.1 KP137439_p77 hypothetical protein phrog_38551 unknown function unknown function 1 50208 50402
AJA73381.1 KP137439_p17 hypothetical protein phrog_7561 unknown function unknown function -1 10463 10732
AJA73409.1 KP137439_p45 pyruvate kinase phrog_9552 kinase other -1 33396 33848
AJA73433.1 KP137439_p69 hypothetical protein phrog_11301 unknown function unknown function 1 47894 48106
AJA73408.1 KP137439_p44 hypothetical protein phrog_7704 unknown function unknown function -1 32791 33318
AJA73412.1 KP137439_p48 hypothetical protein phrog_16197 unknown function unknown function -1 35525 36475
AJA73387.1 KP137439_p23 minor tail protein L phrog_18 minor tail protein tail 1 15174 15890
AJA73442.1 KP137439_p78 holin phrog_20 holin lysis 1 50350 50595
AJA73414.1 KP137439_p50 hypothetical protein phrog_13811 unknown function unknown function -1 36834 37313
AJA73404.1 KP137439_p40 hypothetical protein phrog_32500 unknown function unknown function -1 31529 31759
AJA73371.1 KP137439_p7 hypothetical protein phrog_771 virion structural protein head and packaging 1 5793 6782
AJA73436.1 KP137439_p72 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 48474 49043
AJA73415.1 KP137439_p51 hypothetical protein phrog_18413 unknown function unknown function -1 37310 37669
AJA73439.1 KP137439_p75 hypothetical protein phrog_11765 unknown function unknown function 1 49826 50011
AJA73407.1 KP137439_p43 hypothetical protein phrog_14017 unknown function unknown function -1 32591 32794
AJA73417.1 KP137439_p53 hypothetical protein phrog_20537 unknown function unknown function -1 38748 38984
AJA73401.1 KP137439_p37 hypothetical protein phrog_17752 unknown function unknown function -1 29598 29774
AJA73429.1 KP137439_p65 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 45137 46498
AJA73423.1 KP137439_p59 hypothetical protein phrog_4293 unknown function unknown function -1 42255 42635
AJA73382.1 KP137439_p18 hypothetical protein phrog_13311 unknown function unknown function 1 10865 11323
AJA73375.1 KP137439_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7762 8130
AJA73447.1 KP137439_p83 hypothetical protein phrog_8452 unknown function unknown function 1 51880 52035
AJA73419.1 KP137439_p55 plasmid maintenance system killer HigB phrog_3066 toxin of TA system moron, auxiliary metabolic gene and host takeover 1 39888 40163
AJA73386.1 KP137439_p22 minor tail protein L phrog_2959 minor tail protein tail 1 14696 15166
AJA73383.1 KP137439_p19 hypothetical protein phrog_13701 unknown function unknown function 1 11391 11735
AJA73405.1 KP137439_p41 hypothetical protein phrog_7561 unknown function unknown function 1 31951 32139
AJA73432.1 KP137439_p68 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 47338 47844
AJA73435.1 KP137439_p71 hypothetical protein phrog_12212 unknown function unknown function 1 48359 48481
AJA73378.1 KP137439_p14 toxin-antitoxin system antitoxin component HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 9033 9449
AJA73444.1 KP137439_p80 lytic protein Rz phrog_214 Rz-like spanin lysis 1 51130 51480
AJA73396.1 KP137439_p32 hypothetical protein phrog_16984 unknown function unknown function -1 26429 27019
AJA73428.1 KP137439_p64 replication protein O phrog_5810 replication initiation protein DNA, RNA and nucleotide metabolism 1 44271 45140
AJA73403.1 KP137439_p39 hypothetical protein phrog_3887 transcriptional regulator transcription regulation 1 31274 31489
AJA73379.1 KP137439_p15 toxin-antitoxin system antitoxin component HicA phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 9505 9681
AJA73430.1 KP137439_p66 methyltransferase phrog_359 DNA methyltransferase other 1 46495 47031
AJA73434.1 KP137439_p70 hypothetical protein phrog_12445 unknown function unknown function 1 48152 48346
AJA73372.1 KP137439_p8 hypothetical protein phrog_13988 unknown function unknown function 1 6794 7036
AJA73437.1 KP137439_p73 antitermination protein Q phrog_943 anti-termination protein Q-like transcription regulation 1 49033 49506
AJA73410.1 KP137439_p46 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 34058 34693
AJA73380.1 KP137439_p16 hypothetical protein phrog_791 unknown function unknown function 1 9783 10448
AJA73427.1 KP137439_p63 hypothetical protein phrog_12173 unknown function unknown function 1 44126 44296
AJA73369.1 KP137439_p5 hypothetical protein phrog_760 unknown function unknown function 1 3981 5351
AJA73373.1 KP137439_p9 hypothetical protein phrog_786 unknown function unknown function 1 7039 7416
AJA73370.1 KP137439_p6 hypothetical protein phrog_766 head decoration head and packaging 1 5344 5778
AJA73425.1 KP137439_p61 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 43475 43681
AJA73377.1 KP137439_p13 major tail protein phrog_1407 major tail protein tail 1 8511 8993
AJA73420.1 KP137439_p56 plasmid maintenance system killer HigA phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 40172 40477
AJA73392.1 KP137439_p28 hypothetical protein phrog_14212 unknown function unknown function 1 24615 25007
AJA73395.1 KP137439_p31 hypothetical protein phrog_12690 unknown function unknown function -1 25841 26359
AJA73413.1 KP137439_p49 hypothetical protein phrog_17268 unknown function unknown function -1 36488 36700
AJA73399.1 KP137439_p35 hypothetical protein phrog_8896 excisionase integration and excision -1 28856 29077
AJA73388.1 KP137439_p24 minor tail protein K phrog_30 minor tail protein tail 1 15894 16625
AJA73440.1 KP137439_p76 hypothetical protein phrog_19968 unknown function unknown function 1 50037 50207
AJA73416.1 KP137439_p52 hypothetical protein phrog_18123 unknown function unknown function -1 37673 38179
AJA73398.1 KP137439_p34 integrase phrog_1 integrase integration and excision -1 27794 28834
AJA73422.1 KP137439_p58 hypothetical protein phrog_12015 unknown function unknown function -1 41765 42250
AJA73389.1 KP137439_p25 hypothetical protein phrog_13775 unknown function unknown function 1 16766 16891
AJA73421.1 KP137439_p57 transposase phrog_157 transposase integration and excision -1 40615 41655
AJA73446.1 KP137439_p82 hypothetical protein phrog_26315 unknown function unknown function -1 51671 51856
AJA73426.1 KP137439_p62 CII protein phrog_725 CII-like regulator transcription regulation 1 43702 43962
AJA73385.1 KP137439_p21 minor tail protein M phrog_14 minor tail protein tail 1 14367 14696
AJA73402.1 KP137439_p38 antirepressor protein Ant phrog_245 anti-repressor Ant transcription regulation -1 30028 30729
AJA73374.1 KP137439_p10 hypothetical protein phrog_797 unknown function unknown function 1 7416 7760
AJA73418.1 KP137439_p54 hypothetical protein phrog_12192 unknown function unknown function -1 39366 39662