Genomic map of Salmonella phage Mushroom (KP143762)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP143762
Definition
Salmonella phage Mushroom, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus Mushroom.
DB of origin
PVOG
Length
87709
Host Name
Salmonella sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
128
%GC
39.03
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJF40648.1 KP143762_p118 hypothetical protein phrog_335 phosphatase other -1 82385 83170
AJF40628.1 KP143762_p98 hypothetical protein phrog_4040 unknown function unknown function 1 71708 72052
AJF40574.1 KP143762_p44 hypothetical protein phrog_5768 unknown function unknown function 1 29978 30196
AJF40541.1 KP143762_p11 anaerobic nucleoside-triphosphate reductase subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism -1 7674 8159
AJF40557.1 KP143762_p27 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 18450 19496
AJF40538.1 KP143762_p8 hypothetical protein phrog_3500 unknown function unknown function -1 6403 6918
AJF40559.1 KP143762_p29 hypothetical protein phrog_4424 unknown function unknown function -1 20489 20638
AJF40622.1 KP143762_p92 hypothetical protein phrog_4463 unknown function unknown function 1 68865 69236
AJF40535.1 KP143762_p5 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 4739 5230
AJF40601.1 KP143762_p71 structural protein phrog_280 virion structural protein head and packaging -1 49602 50048
AJF40575.1 KP143762_p45 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 30171 31271
AJF40550.1 KP143762_p20 ribonucleotide reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 13558 15792
AJF40563.1 KP143762_p33 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 23078 23821
AJF40638.1 KP143762_p108 hypothetical protein phrog_4640 unknown function unknown function -1 77682 77915
AJF40544.1 KP143762_p14 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9909 10373
AJF40656.1 KP143762_p126 polynucleotide kinase phrog_3970 polynucleotide kinase other -1 85199 85894
AJF40537.1 KP143762_p7 hypothetical protein phrog_4726 unknown function unknown function -1 6132 6410
AJF40603.1 KP143762_p73 hypothetical protein phrog_4082 unknown function unknown function -1 51417 52016
AJF40546.1 KP143762_p16 hypothetical protein phrog_4532 unknown function unknown function -1 11734 11940
AJF40540.1 KP143762_p10 hypothetical protein phrog_4425 unknown function unknown function -1 7293 7550
AJF40532.1 KP143762_p2 heat shock protein phrog_3931 unknown function unknown function -1 2396 2572
AJF40635.1 KP143762_p105 hypothetical protein phrog_4330 unknown function unknown function 1 74269 74817
AJF40588.1 KP143762_p58 tail fiber protein phrog_4277 tail fiber protein tail -1 37133 39652
AJF40640.1 KP143762_p110 hypothetical protein phrog_3623 unknown function unknown function -1 78633 78836
AJF40591.1 KP143762_p61 hypothetical protein phrog_4017 baseplate protein tail -1 41174 42031
AJF40616.1 KP143762_p86 hypothetical protein phrog_2114 unknown function unknown function -1 60763 61497
AJF40629.1 KP143762_p99 hypothetical protein phrog_4109 unknown function unknown function 1 72052 72633
AJF40572.1 KP143762_p42 hypothetical protein phrog_902 unknown function unknown function 1 29507 29764
AJF40580.1 KP143762_p50 transcriptional regulator phrog_1373 transcriptional regulator transcription regulation 1 33555 33854
AJF40652.1 KP143762_p122 hypothetical protein phrog_4391 unknown function unknown function -1 83895 84164
AJF40585.1 KP143762_p55 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 35549 36448
AJF40605.1 KP143762_p75 hypothetical protein phrog_222 tail completion or Neck1 protein connector -1 52389 52823
AJF40565.1 KP143762_p35 hypothetical protein phrog_4039 unknown function unknown function -1 24685 25107
AJF40611.1 KP143762_p81 hypothetical protein phrog_3977 unknown function unknown function -1 56560 57060
AJF40641.1 KP143762_p111 hypothetical protein phrog_4327 unknown function unknown function -1 78939 79343
AJF40618.1 KP143762_p88 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism -1 65740 67155
AJF40612.1 KP143762_p82 hypothetical protein phrog_113 portal protein head and packaging -1 57060 58526
AJF40579.1 KP143762_p49 hypothetical protein phrog_4473 unknown function unknown function 1 33350 33562
AJF40626.1 KP143762_p96 hypothetical protein phrog_4348 unknown function unknown function 1 71024 71422
AJF40608.1 KP143762_p78 hypothetical protein phrog_4146 tail protease other -1 54481 54858
AJF40619.1 KP143762_p89 hypothetical protein phrog_4114 unknown function unknown function -1 67237 67608
AJF40590.1 KP143762_p60 hypothetical protein phrog_4141 unknown function unknown function -1 40872 41174
AJF40570.1 KP143762_p40 hypothetical protein phrog_4230 unknown function unknown function 1 29156 29374
AJF40613.1 KP143762_p83 terminase large subunit phrog_979 terminase large subunit head and packaging -1 58543 60144
AJF40651.1 KP143762_p121 hypothetical protein phrog_4453 unknown function unknown function -1 83566 83892
AJF40555.1 KP143762_p25 GIY-YIG homing endonuclease phrog_447 NAD synthetase other -1 17475 17975
AJF40637.1 KP143762_p107 hypothetical protein phrog_4318 unknown function unknown function -1 77252 77593
AJF40650.1 KP143762_p120 hypothetical protein phrog_6082 unknown function unknown function -1 83364 83591
AJF40623.1 KP143762_p93 tail protein phrog_3995 tail protein tail 1 69233 70117
AJF40655.1 KP143762_p125 hypothetical protein phrog_2267 unknown function unknown function -1 84724 85188
AJF40597.1 KP143762_p67 hypothetical protein phrog_3721 unknown function unknown function -1 45863 46660
AJF40594.1 KP143762_p64 baseplate assembly protein phrog_11 baseplate spike tail -1 43922 44545
AJF40614.1 KP143762_p84 hypothetical protein phrog_4397 unknown function unknown function -1 60166 60366
AJF40573.1 KP143762_p43 hypothetical protein phrog_4427 unknown function unknown function 1 29775 29981
AJF40632.1 KP143762_p102 hypothetical protein phrog_6279 unknown function unknown function 1 73417 73512
AJF40545.1 KP143762_p15 anaerobic nucleoside-diphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 10486 11685
AJF40551.1 KP143762_p21 hypothetical protein phrog_3358 unknown function unknown function -1 15839 16177
AJF40653.1 KP143762_p123 o-spanin phrog_4180 unknown function unknown function -1 84161 84430
AJF40602.1 KP143762_p72 structural protein phrog_205 tail sheath tail -1 50064 51416
AJF40556.1 KP143762_p26 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17972 18472
AJF40634.1 KP143762_p104 hypothetical protein phrog_4713 unknown function unknown function 1 73791 74255
AJF40595.1 KP143762_p65 hypothetical protein phrog_196 baseplate hub tail -1 44545 45522
AJF40609.1 KP143762_p79 prohead protease phrog_53 head maturation protease head and packaging -1 54870 56216
AJF40564.1 KP143762_p34 hypothetical protein phrog_4251 minor tail protein tail -1 23883 24683
AJF40561.1 KP143762_p31 DNA helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 20891 22876
AJF40615.1 KP143762_p85 hypothetical protein phrog_20550 unknown function unknown function -1 60473 60700
AJF40624.1 KP143762_p94 endolysin phrog_7 endolysin lysis 1 70117 70581
AJF40584.1 KP143762_p54 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 35002 35547
AJF40562.1 KP143762_p32 hypothetical protein phrog_4469 unknown function unknown function -1 22869 23063
AJF40553.1 KP143762_p23 nucleoside triphosphate pyrophosphohydrolase phrog_2144 MazG-like pyrophosphatase other -1 16474 17229
AJF40599.1 KP143762_p69 tape measure chaperone phrog_3840 tail assembly chaperone tail -1 48888 49528
AJF40592.1 KP143762_p62 baseplate assembly protein phrog_6 baseplate wedge subunit tail -1 42034 43503
AJF40639.1 KP143762_p109 hypothetical protein phrog_3303 unknown function unknown function -1 77979 78545
AJF40627.1 KP143762_p97 hypothetical protein phrog_4385 unknown function unknown function 1 71422 71715
AJF40560.1 KP143762_p30 hypothetical protein phrog_4982 unknown function unknown function -1 20635 20916
AJF40558.1 KP143762_p28 hypothetical protein phrog_3877 unknown function unknown function -1 19559 20416
AJF40631.1 KP143762_p101 hypothetical protein phrog_4343 unknown function unknown function 1 72932 73435
AJF40581.1 KP143762_p51 hypothetical protein phrog_4116 unknown function unknown function 1 33856 34215
AJF40621.1 KP143762_p91 hypothetical protein phrog_4034 unknown function unknown function 1 68227 68817
AJF40549.1 KP143762_p19 hypothetical protein phrog_2652 unknown function unknown function -1 13245 13439
AJF40645.1 KP143762_p115 hypothetical protein phrog_4190 unknown function unknown function -1 80502 81014
AJF40571.1 KP143762_p41 hypothetical protein phrog_2381 unknown function unknown function 1 29371 29517
AJF40604.1 KP143762_p74 hypothetical protein phrog_2874 unknown function unknown function -1 51991 52392
AJF40617.1 KP143762_p87 holin phrog_2143 unknown function unknown function -1 61949 62506
AJF40543.1 KP143762_p13 anaerobic nucleoside-diphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism -1 8799 9665
AJF40647.1 KP143762_p117 hypothetical protein phrog_4495 unknown function unknown function -1 81482 81862
AJF40578.1 KP143762_p48 hypothetical protein phrog_4332 unknown function unknown function 1 32965 33348
AJF40547.1 KP143762_p17 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 11933 12175
AJF40548.1 KP143762_p18 ribonucleotide reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 12175 13248
AJF40534.1 KP143762_p4 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other -1 2943 4724
AJF40643.1 KP143762_p113 hypothetical protein phrog_4375 unknown function unknown function -1 79793 80125
AJF40636.1 KP143762_p106 hypothetical protein phrog_4725 unknown function unknown function -1 76499 77029
AJF40596.1 KP143762_p66 hypothetical protein phrog_349 virion structural protein head and packaging -1 45522 45863
AJF40539.1 KP143762_p9 hypothetical protein phrog_4462 unknown function unknown function -1 6970 7290
AJF40606.1 KP143762_p76 hypothetical protein phrog_1732 unknown function unknown function -1 52871 53320
AJF40630.1 KP143762_p100 hypothetical protein phrog_4459 unknown function unknown function 1 72717 72935
AJF40536.1 KP143762_p6 ribose-phosphate diphosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 5239 6120
AJF40620.1 KP143762_p90 hypothetical protein phrog_5064 unknown function unknown function 1 68001 68246
AJF40531.1 KP143762_p1 rIIa protein phrog_612 RIIA lysis inhibitor lysis -1 1 2367
AJF40610.1 KP143762_p80 hypothetical protein phrog_240 head protein head and packaging -1 56228 56560
AJF40577.1 KP143762_p47 hypothetical protein phrog_5926 unknown function unknown function 1 32138 32578
AJF40576.1 KP143762_p46 hypothetical protein phrog_4652 unknown function unknown function 1 31548 32135
AJF40587.1 KP143762_p57 hypothetical protein phrog_402 unknown function unknown function -1 36859 36960
AJF40567.1 KP143762_p37 DNA polymerase subunit phrog_6375 DNA polymerase DNA, RNA and nucleotide metabolism 1 27932 28375
AJF40654.1 KP143762_p124 i-spanin phrog_1152 Rz-like spanin lysis -1 84324 84671
AJF40649.1 KP143762_p119 hypothetical protein phrog_2210 unknown function unknown function -1 83171 83371
AJF40600.1 KP143762_p70 tape measure chaperone phrog_1613 tail assembly chaperone tail -1 49130 49528
AJF40582.1 KP143762_p52 hypothetical protein phrog_4422 unknown function unknown function 1 34229 34744
AJF40598.1 KP143762_p68 tape measure protein phrog_4036 tail length tape measure protein tail -1 46660 48888
AJF40657.1 KP143762_p127 endoribonuclease phrog_600 unknown function unknown function -1 85872 86420
AJF40644.1 KP143762_p114 hypothetical protein phrog_4401 unknown function unknown function -1 80119 80415
AJF40566.1 KP143762_p36 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 25365 27548
AJF40586.1 KP143762_p56 hypothetical protein phrog_4038 unknown function unknown function -1 36487 36858
AJF40583.1 KP143762_p53 hypothetical protein phrog_2993 unknown function unknown function 1 34745 35005
AJF40607.1 KP143762_p77 major head protein phrog_29 major head protein head and packaging -1 53341 54447
AJF40533.1 KP143762_p3 hypothetical protein phrog_4262 unknown function unknown function -1 2554 2889
AJF40552.1 KP143762_p22 hypothetical protein phrog_4007 unknown function unknown function -1 16170 16493
AJF40542.1 KP143762_p12 homing endonuclease phrog_655 homing endonuclease DNA, RNA and nucleotide metabolism -1 8234 8734
AJF40569.1 KP143762_p39 hypothetical protein phrog_5180 unknown function unknown function 1 28950 29159
AJF40642.1 KP143762_p112 hypothetical protein phrog_3436 unknown function unknown function -1 79430 79702
AJF40658.1 KP143762_p128 rIIb protein phrog_609 RIIB lysis inhibitor lysis -1 86521 87630
AJF40633.1 KP143762_p103 hypothetical protein phrog_4457 unknown function unknown function 1 73512 73736
AJF40568.1 KP143762_p38 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28362 28898
AJF40646.1 KP143762_p116 hypothetical protein phrog_5089 unknown function unknown function -1 81102 81392
AJF40589.1 KP143762_p59 tail fiber protein phrog_2097 tail fiber protein tail -1 39703 40869
AJF40625.1 KP143762_p95 hypothetical protein phrog_4266 unknown function unknown function 1 70633 71031
AJF40593.1 KP143762_p63 hypothetical protein phrog_120 baseplate wedge subunit tail -1 43503 43922
AJF40554.1 KP143762_p24 hypothetical protein phrog_4442 unknown function unknown function -1 17205 17453