| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP143762 |
Definition |
Salmonella phage Mushroom, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus Mushroom. |
DB of origin |
PVOG |
Length |
87709 |
Host Name |
Salmonella sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
128 |
%GC |
39.03 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AJF40648.1 | KP143762_p118 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 82385 | 83170 |
| AJF40628.1 | KP143762_p98 | hypothetical protein | phrog_4040 | unknown function | unknown function | 1 | 71708 | 72052 |
| AJF40574.1 | KP143762_p44 | hypothetical protein | phrog_5768 | unknown function | unknown function | 1 | 29978 | 30196 |
| AJF40541.1 | KP143762_p11 | anaerobic nucleoside-triphosphate reductase subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 7674 | 8159 |
| AJF40557.1 | KP143762_p27 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18450 | 19496 |
| AJF40538.1 | KP143762_p8 | hypothetical protein | phrog_3500 | unknown function | unknown function | -1 | 6403 | 6918 |
| AJF40559.1 | KP143762_p29 | hypothetical protein | phrog_4424 | unknown function | unknown function | -1 | 20489 | 20638 |
| AJF40622.1 | KP143762_p92 | hypothetical protein | phrog_4463 | unknown function | unknown function | 1 | 68865 | 69236 |
| AJF40535.1 | KP143762_p5 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 4739 | 5230 |
| AJF40601.1 | KP143762_p71 | structural protein | phrog_280 | virion structural protein | head and packaging | -1 | 49602 | 50048 |
| AJF40575.1 | KP143762_p45 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 30171 | 31271 |
| AJF40550.1 | KP143762_p20 | ribonucleotide reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 13558 | 15792 |
| AJF40563.1 | KP143762_p33 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 23078 | 23821 |
| AJF40638.1 | KP143762_p108 | hypothetical protein | phrog_4640 | unknown function | unknown function | -1 | 77682 | 77915 |
| AJF40544.1 | KP143762_p14 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 9909 | 10373 |
| AJF40656.1 | KP143762_p126 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | -1 | 85199 | 85894 |
| AJF40537.1 | KP143762_p7 | hypothetical protein | phrog_4726 | unknown function | unknown function | -1 | 6132 | 6410 |
| AJF40603.1 | KP143762_p73 | hypothetical protein | phrog_4082 | unknown function | unknown function | -1 | 51417 | 52016 |
| AJF40546.1 | KP143762_p16 | hypothetical protein | phrog_4532 | unknown function | unknown function | -1 | 11734 | 11940 |
| AJF40540.1 | KP143762_p10 | hypothetical protein | phrog_4425 | unknown function | unknown function | -1 | 7293 | 7550 |
| AJF40532.1 | KP143762_p2 | heat shock protein | phrog_3931 | unknown function | unknown function | -1 | 2396 | 2572 |
| AJF40635.1 | KP143762_p105 | hypothetical protein | phrog_4330 | unknown function | unknown function | 1 | 74269 | 74817 |
| AJF40588.1 | KP143762_p58 | tail fiber protein | phrog_4277 | tail fiber protein | tail | -1 | 37133 | 39652 |
| AJF40640.1 | KP143762_p110 | hypothetical protein | phrog_3623 | unknown function | unknown function | -1 | 78633 | 78836 |
| AJF40591.1 | KP143762_p61 | hypothetical protein | phrog_4017 | baseplate protein | tail | -1 | 41174 | 42031 |
| AJF40616.1 | KP143762_p86 | hypothetical protein | phrog_2114 | unknown function | unknown function | -1 | 60763 | 61497 |
| AJF40629.1 | KP143762_p99 | hypothetical protein | phrog_4109 | unknown function | unknown function | 1 | 72052 | 72633 |
| AJF40572.1 | KP143762_p42 | hypothetical protein | phrog_902 | unknown function | unknown function | 1 | 29507 | 29764 |
| AJF40580.1 | KP143762_p50 | transcriptional regulator | phrog_1373 | transcriptional regulator | transcription regulation | 1 | 33555 | 33854 |
| AJF40652.1 | KP143762_p122 | hypothetical protein | phrog_4391 | unknown function | unknown function | -1 | 83895 | 84164 |
| AJF40585.1 | KP143762_p55 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 35549 | 36448 |
| AJF40605.1 | KP143762_p75 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 52389 | 52823 |
| AJF40565.1 | KP143762_p35 | hypothetical protein | phrog_4039 | unknown function | unknown function | -1 | 24685 | 25107 |
| AJF40611.1 | KP143762_p81 | hypothetical protein | phrog_3977 | unknown function | unknown function | -1 | 56560 | 57060 |
| AJF40641.1 | KP143762_p111 | hypothetical protein | phrog_4327 | unknown function | unknown function | -1 | 78939 | 79343 |
| AJF40618.1 | KP143762_p88 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 65740 | 67155 |
| AJF40612.1 | KP143762_p82 | hypothetical protein | phrog_113 | portal protein | head and packaging | -1 | 57060 | 58526 |
| AJF40579.1 | KP143762_p49 | hypothetical protein | phrog_4473 | unknown function | unknown function | 1 | 33350 | 33562 |
| AJF40626.1 | KP143762_p96 | hypothetical protein | phrog_4348 | unknown function | unknown function | 1 | 71024 | 71422 |
| AJF40608.1 | KP143762_p78 | hypothetical protein | phrog_4146 | tail protease | other | -1 | 54481 | 54858 |
| AJF40619.1 | KP143762_p89 | hypothetical protein | phrog_4114 | unknown function | unknown function | -1 | 67237 | 67608 |
| AJF40590.1 | KP143762_p60 | hypothetical protein | phrog_4141 | unknown function | unknown function | -1 | 40872 | 41174 |
| AJF40570.1 | KP143762_p40 | hypothetical protein | phrog_4230 | unknown function | unknown function | 1 | 29156 | 29374 |
| AJF40613.1 | KP143762_p83 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | -1 | 58543 | 60144 |
| AJF40651.1 | KP143762_p121 | hypothetical protein | phrog_4453 | unknown function | unknown function | -1 | 83566 | 83892 |
| AJF40555.1 | KP143762_p25 | GIY-YIG homing endonuclease | phrog_447 | NAD synthetase | other | -1 | 17475 | 17975 |
| AJF40637.1 | KP143762_p107 | hypothetical protein | phrog_4318 | unknown function | unknown function | -1 | 77252 | 77593 |
| AJF40650.1 | KP143762_p120 | hypothetical protein | phrog_6082 | unknown function | unknown function | -1 | 83364 | 83591 |
| AJF40623.1 | KP143762_p93 | tail protein | phrog_3995 | tail protein | tail | 1 | 69233 | 70117 |
| AJF40655.1 | KP143762_p125 | hypothetical protein | phrog_2267 | unknown function | unknown function | -1 | 84724 | 85188 |
| AJF40597.1 | KP143762_p67 | hypothetical protein | phrog_3721 | unknown function | unknown function | -1 | 45863 | 46660 |
| AJF40594.1 | KP143762_p64 | baseplate assembly protein | phrog_11 | baseplate spike | tail | -1 | 43922 | 44545 |
| AJF40614.1 | KP143762_p84 | hypothetical protein | phrog_4397 | unknown function | unknown function | -1 | 60166 | 60366 |
| AJF40573.1 | KP143762_p43 | hypothetical protein | phrog_4427 | unknown function | unknown function | 1 | 29775 | 29981 |
| AJF40632.1 | KP143762_p102 | hypothetical protein | phrog_6279 | unknown function | unknown function | 1 | 73417 | 73512 |
| AJF40545.1 | KP143762_p15 | anaerobic nucleoside-diphosphate reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 10486 | 11685 |
| AJF40551.1 | KP143762_p21 | hypothetical protein | phrog_3358 | unknown function | unknown function | -1 | 15839 | 16177 |
| AJF40653.1 | KP143762_p123 | o-spanin | phrog_4180 | unknown function | unknown function | -1 | 84161 | 84430 |
| AJF40602.1 | KP143762_p72 | structural protein | phrog_205 | tail sheath | tail | -1 | 50064 | 51416 |
| AJF40556.1 | KP143762_p26 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 17972 | 18472 |
| AJF40634.1 | KP143762_p104 | hypothetical protein | phrog_4713 | unknown function | unknown function | 1 | 73791 | 74255 |
| AJF40595.1 | KP143762_p65 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 44545 | 45522 |
| AJF40609.1 | KP143762_p79 | prohead protease | phrog_53 | head maturation protease | head and packaging | -1 | 54870 | 56216 |
| AJF40564.1 | KP143762_p34 | hypothetical protein | phrog_4251 | minor tail protein | tail | -1 | 23883 | 24683 |
| AJF40561.1 | KP143762_p31 | DNA helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 20891 | 22876 |
| AJF40615.1 | KP143762_p85 | hypothetical protein | phrog_20550 | unknown function | unknown function | -1 | 60473 | 60700 |
| AJF40624.1 | KP143762_p94 | endolysin | phrog_7 | endolysin | lysis | 1 | 70117 | 70581 |
| AJF40584.1 | KP143762_p54 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 35002 | 35547 |
| AJF40562.1 | KP143762_p32 | hypothetical protein | phrog_4469 | unknown function | unknown function | -1 | 22869 | 23063 |
| AJF40553.1 | KP143762_p23 | nucleoside triphosphate pyrophosphohydrolase | phrog_2144 | MazG-like pyrophosphatase | other | -1 | 16474 | 17229 |
| AJF40599.1 | KP143762_p69 | tape measure chaperone | phrog_3840 | tail assembly chaperone | tail | -1 | 48888 | 49528 |
| AJF40592.1 | KP143762_p62 | baseplate assembly protein | phrog_6 | baseplate wedge subunit | tail | -1 | 42034 | 43503 |
| AJF40639.1 | KP143762_p109 | hypothetical protein | phrog_3303 | unknown function | unknown function | -1 | 77979 | 78545 |
| AJF40627.1 | KP143762_p97 | hypothetical protein | phrog_4385 | unknown function | unknown function | 1 | 71422 | 71715 |
| AJF40560.1 | KP143762_p30 | hypothetical protein | phrog_4982 | unknown function | unknown function | -1 | 20635 | 20916 |
| AJF40558.1 | KP143762_p28 | hypothetical protein | phrog_3877 | unknown function | unknown function | -1 | 19559 | 20416 |
| AJF40631.1 | KP143762_p101 | hypothetical protein | phrog_4343 | unknown function | unknown function | 1 | 72932 | 73435 |
| AJF40581.1 | KP143762_p51 | hypothetical protein | phrog_4116 | unknown function | unknown function | 1 | 33856 | 34215 |
| AJF40621.1 | KP143762_p91 | hypothetical protein | phrog_4034 | unknown function | unknown function | 1 | 68227 | 68817 |
| AJF40549.1 | KP143762_p19 | hypothetical protein | phrog_2652 | unknown function | unknown function | -1 | 13245 | 13439 |
| AJF40645.1 | KP143762_p115 | hypothetical protein | phrog_4190 | unknown function | unknown function | -1 | 80502 | 81014 |
| AJF40571.1 | KP143762_p41 | hypothetical protein | phrog_2381 | unknown function | unknown function | 1 | 29371 | 29517 |
| AJF40604.1 | KP143762_p74 | hypothetical protein | phrog_2874 | unknown function | unknown function | -1 | 51991 | 52392 |
| AJF40617.1 | KP143762_p87 | holin | phrog_2143 | unknown function | unknown function | -1 | 61949 | 62506 |
| AJF40543.1 | KP143762_p13 | anaerobic nucleoside-diphosphate reductase | phrog_4218 | anaerobic ribonucleoside reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 8799 | 9665 |
| AJF40647.1 | KP143762_p117 | hypothetical protein | phrog_4495 | unknown function | unknown function | -1 | 81482 | 81862 |
| AJF40578.1 | KP143762_p48 | hypothetical protein | phrog_4332 | unknown function | unknown function | 1 | 32965 | 33348 |
| AJF40547.1 | KP143762_p17 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 11933 | 12175 |
| AJF40548.1 | KP143762_p18 | ribonucleotide reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 12175 | 13248 |
| AJF40534.1 | KP143762_p4 | nicotinamide phosphoribosyl transferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 2943 | 4724 |
| AJF40643.1 | KP143762_p113 | hypothetical protein | phrog_4375 | unknown function | unknown function | -1 | 79793 | 80125 |
| AJF40636.1 | KP143762_p106 | hypothetical protein | phrog_4725 | unknown function | unknown function | -1 | 76499 | 77029 |
| AJF40596.1 | KP143762_p66 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | -1 | 45522 | 45863 |
| AJF40539.1 | KP143762_p9 | hypothetical protein | phrog_4462 | unknown function | unknown function | -1 | 6970 | 7290 |
| AJF40606.1 | KP143762_p76 | hypothetical protein | phrog_1732 | unknown function | unknown function | -1 | 52871 | 53320 |
| AJF40630.1 | KP143762_p100 | hypothetical protein | phrog_4459 | unknown function | unknown function | 1 | 72717 | 72935 |
| AJF40536.1 | KP143762_p6 | ribose-phosphate diphosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 5239 | 6120 |
| AJF40620.1 | KP143762_p90 | hypothetical protein | phrog_5064 | unknown function | unknown function | 1 | 68001 | 68246 |
| AJF40531.1 | KP143762_p1 | rIIa protein | phrog_612 | RIIA lysis inhibitor | lysis | -1 | 1 | 2367 |
| AJF40610.1 | KP143762_p80 | hypothetical protein | phrog_240 | head protein | head and packaging | -1 | 56228 | 56560 |
| AJF40577.1 | KP143762_p47 | hypothetical protein | phrog_5926 | unknown function | unknown function | 1 | 32138 | 32578 |
| AJF40576.1 | KP143762_p46 | hypothetical protein | phrog_4652 | unknown function | unknown function | 1 | 31548 | 32135 |
| AJF40587.1 | KP143762_p57 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 36859 | 36960 |
| AJF40567.1 | KP143762_p37 | DNA polymerase subunit | phrog_6375 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 27932 | 28375 |
| AJF40654.1 | KP143762_p124 | i-spanin | phrog_1152 | Rz-like spanin | lysis | -1 | 84324 | 84671 |
| AJF40649.1 | KP143762_p119 | hypothetical protein | phrog_2210 | unknown function | unknown function | -1 | 83171 | 83371 |
| AJF40600.1 | KP143762_p70 | tape measure chaperone | phrog_1613 | tail assembly chaperone | tail | -1 | 49130 | 49528 |
| AJF40582.1 | KP143762_p52 | hypothetical protein | phrog_4422 | unknown function | unknown function | 1 | 34229 | 34744 |
| AJF40598.1 | KP143762_p68 | tape measure protein | phrog_4036 | tail length tape measure protein | tail | -1 | 46660 | 48888 |
| AJF40657.1 | KP143762_p127 | endoribonuclease | phrog_600 | unknown function | unknown function | -1 | 85872 | 86420 |
| AJF40644.1 | KP143762_p114 | hypothetical protein | phrog_4401 | unknown function | unknown function | -1 | 80119 | 80415 |
| AJF40566.1 | KP143762_p36 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 25365 | 27548 |
| AJF40586.1 | KP143762_p56 | hypothetical protein | phrog_4038 | unknown function | unknown function | -1 | 36487 | 36858 |
| AJF40583.1 | KP143762_p53 | hypothetical protein | phrog_2993 | unknown function | unknown function | 1 | 34745 | 35005 |
| AJF40607.1 | KP143762_p77 | major head protein | phrog_29 | major head protein | head and packaging | -1 | 53341 | 54447 |
| AJF40533.1 | KP143762_p3 | hypothetical protein | phrog_4262 | unknown function | unknown function | -1 | 2554 | 2889 |
| AJF40552.1 | KP143762_p22 | hypothetical protein | phrog_4007 | unknown function | unknown function | -1 | 16170 | 16493 |
| AJF40542.1 | KP143762_p12 | homing endonuclease | phrog_655 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 8234 | 8734 |
| AJF40569.1 | KP143762_p39 | hypothetical protein | phrog_5180 | unknown function | unknown function | 1 | 28950 | 29159 |
| AJF40642.1 | KP143762_p112 | hypothetical protein | phrog_3436 | unknown function | unknown function | -1 | 79430 | 79702 |
| AJF40658.1 | KP143762_p128 | rIIb protein | phrog_609 | RIIB lysis inhibitor | lysis | -1 | 86521 | 87630 |
| AJF40633.1 | KP143762_p103 | hypothetical protein | phrog_4457 | unknown function | unknown function | 1 | 73512 | 73736 |
| AJF40568.1 | KP143762_p38 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28362 | 28898 |
| AJF40646.1 | KP143762_p116 | hypothetical protein | phrog_5089 | unknown function | unknown function | -1 | 81102 | 81392 |
| AJF40589.1 | KP143762_p59 | tail fiber protein | phrog_2097 | tail fiber protein | tail | -1 | 39703 | 40869 |
| AJF40625.1 | KP143762_p95 | hypothetical protein | phrog_4266 | unknown function | unknown function | 1 | 70633 | 71031 |
| AJF40593.1 | KP143762_p63 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | -1 | 43503 | 43922 |
| AJF40554.1 | KP143762_p24 | hypothetical protein | phrog_4442 | unknown function | unknown function | -1 | 17205 | 17453 |