Genomic map of Bacteriophage Redbud (KP296794)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP296794
Definition
Bacteriophage Redbud, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus.
DB of origin
PVOG
Length
37971
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
41.81
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJK27912.1 KP296794_p53 hypothetical protein phrog_98 unknown function unknown function 1 33434 33817
AJK27915.1 KP296794_p56 hypothetical protein phrog_5494 unknown function unknown function 1 34738 35196
AJK27862.1 KP296794_p3 portal protein phrog_12 portal protein head and packaging 1 2084 3319
AJK27878.1 KP296794_p19 hypothetical protein phrog_134 unknown function unknown function 1 13806 13967
AJK27914.1 KP296794_p55 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34022 34579
AJK27867.1 KP296794_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 5534 5857
AJK27894.1 KP296794_p35 hypothetical protein phrog_12765 unknown function unknown function 1 23262 23480
AJK27916.1 KP296794_p57 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 35247 35687
AJK27919.1 KP296794_p60 transglycosylase-like protein phrog_1315 unknown function unknown function 1 37316 37582
AJK27901.1 KP296794_p42 ATPase phrog_1499 unknown function unknown function 1 25799 27328
AJK27892.1 KP296794_p33 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 22259 22498
AJK27861.1 KP296794_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
AJK27883.1 KP296794_p24 hypothetical protein phrog_26129 unknown function unknown function -1 15670 16464
AJK27860.1 KP296794_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
AJK27875.1 KP296794_p16 hypothetical protein phrog_538 minor tail protein tail 1 11264 12382
AJK27876.1 KP296794_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12388 13461
AJK27870.1 KP296794_p11 major tail protein phrog_1407 major tail protein tail 1 6666 7103
AJK27917.1 KP296794_p58 HicB-like protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 35827 36249
AJK27887.1 KP296794_p28 anti-repressor like protein phrog_17477 anti-repressor transcription regulation 1 18213 18656
AJK27873.1 KP296794_p14 tail tape measure phrog_58 tail length tape measure protein tail 1 7777 10413
AJK27902.1 KP296794_p43 hypothetical protein phrog_5189 unknown function unknown function 1 27325 27522
AJK27882.1 KP296794_p23 hypothetical protein phrog_24359 unknown function unknown function -1 15353 15592
AJK27918.1 KP296794_p59 HicA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 36311 36526
AJK27900.1 KP296794_p41 hypothetical protein phrog_8288 unknown function unknown function 1 25525 25815
AJK27864.1 KP296794_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5014
AJK27893.1 KP296794_p34 DNA binding antirepressor phrog_373 anti-repressor transcription regulation 1 22495 23235
AJK27911.1 KP296794_p52 MazG-like nucleotide pyrophosphohydrolase phrog_715 MazG-like pyrophosphatase other 1 33022 33327
AJK27896.1 KP296794_p37 hypothetical protein phrog_9497 unknown function unknown function 1 23758 24021
AJK27874.1 KP296794_p15 tail protein phrog_33 distal tail protein Dit tail 1 10410 11261
AJK27909.1 KP296794_p50 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 31973 33025
AJK27868.1 KP296794_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5857 6285
AJK27885.1 KP296794_p26 hypothetical protein phrog_806 unknown function unknown function -1 17183 17734
AJK27879.1 KP296794_p20 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13948 14187
AJK27907.1 KP296794_p48 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30326 31654
AJK27903.1 KP296794_p44 RecT-like protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27525 28439
AJK27908.1 KP296794_p49 hypothetical protein phrog_6868 unknown function unknown function 1 31657 31962
AJK27910.1 KP296794_p51 hypothetical protein phrog_1008 DNA methyltransferase other 1 32157 32861
AJK27871.1 KP296794_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7100 7438
AJK27899.1 KP296794_p40 hypothetical protein phrog_8406 unknown function unknown function 1 25257 25520
AJK27889.1 KP296794_p30 transcriptional regulator phrog_18248 transcriptional regulator transcription regulation -1 20238 21032
AJK27897.1 KP296794_p38 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 24048 24806
AJK27886.1 KP296794_p27 hypothetical protein phrog_19875 unknown function unknown function -1 17831 18109
AJK27913.1 KP296794_p54 hypothetical protein phrog_6998 unknown function unknown function 1 33810 34025
AJK27890.1 KP296794_p31 DNA binding protein phrog_1468 transcriptional repressor transcription regulation 1 21296 21493
AJK27904.1 KP296794_p45 beta-lactamase-like hydrolase phrog_392 metal-dependent hydrolase other 1 28452 29210
AJK27905.1 KP296794_p46 hypothetical protein phrog_7503 unknown function unknown function 1 29207 29521
AJK27880.1 KP296794_p21 N-acetylmuramoyl-L-alanine amidase-like protein phrog_3088 amidase lysis 1 14187 14858
AJK27865.1 KP296794_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5117 5281
AJK27863.1 KP296794_p4 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 3309 4025
AJK27895.1 KP296794_p36 hypothetical protein phrog_12380 unknown function unknown function 1 23525 23752
AJK27866.1 KP296794_p7 head-tail connector phrog_40 head-tail adaptor Ad1 connector 1 5274 5537
AJK27891.1 KP296794_p32 DNA binding antirepressor-like protein phrog_63 anti-repressor Ant transcription regulation 1 21490 22230
AJK27920.1 KP296794_p61 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37579 37917
AJK27884.1 KP296794_p25 hypothetical protein phrog_24293 unknown function unknown function 1 16636 16872
AJK27888.1 KP296794_p29 integrase phrog_1 integrase integration and excision -1 18968 20191
AJK27881.1 KP296794_p22 holin-like protein phrog_1299 holin lysis 1 14868 15110
AJK27906.1 KP296794_p47 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 29536 30366
AJK27877.1 KP296794_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13471 13806
AJK27869.1 KP296794_p10 tail protein phrog_176 tail terminator connector 1 6269 6664
AJK27872.1 KP296794_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7465 7719
AJK27898.1 KP296794_p39 hypothetical protein phrog_12825 unknown function unknown function 1 24803 25282