| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP343639 |
Definition |
Ralstonia phage phiITL-1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Serkorvirus; Ralstonia virus ITL1. |
DB of origin |
PVOG |
Length |
38731 |
Host Name |
Ralstonia solanacearum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
62.75 |
Number of singletons |
20 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AJT60793.1 | KP343639_p8 | hypothetical protein | phrog_1233 | unknown function | unknown function | 1 | 10382 | 10705 |
| AJT60801.1 | KP343639_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15511 | 15720 |
| AJT60799.1 | KP343639_p15 | hypothetical protein | phrog_30187 | unknown function | unknown function | 1 | 14799 | 15002 |
| AJT60833.1 | KP343639_p49 | hypothetical protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 32507 | 32809 |
| AJT60805.1 | KP343639_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16150 | 16416 |
| AJT60826.1 | KP343639_p42 | DNA primase/helicase-like protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 26474 | 28162 |
| AJT60803.1 | KP343639_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15747 | 15944 |
| AJT60827.1 | KP343639_p43 | DNA polymerase-like protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 28172 | 30280 |
| AJT60800.1 | KP343639_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15267 | 15506 |
| AJT60807.1 | KP343639_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16608 | 16766 |
| AJT60822.1 | KP343639_p38 | ssDNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 24757 | 25428 |
| AJT60824.1 | KP343639_p40 | lysozyme-like protein | phrog_822 | amidase | lysis | 1 | 25829 | 26374 |
| AJT60834.1 | KP343639_p50 | head to tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 32819 | 34414 |
| AJT60809.1 | KP343639_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17086 | 17739 |
| AJT60798.1 | KP343639_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13094 | 13357 |
| AJT60818.1 | KP343639_p34 | hypothetical protein | phrog_30269 | unknown function | unknown function | 1 | 23535 | 23843 |
| AJT60835.1 | KP343639_p51 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 34472 | 35302 |
| AJT60802.1 | KP343639_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15671 | 15868 |
| AJT60812.1 | KP343639_p28 | DNA ligase-like protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 18371 | 19300 |
| AJT60836.1 | KP343639_p52 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 35418 | 36374 |
| AJT60831.1 | KP343639_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31820 | 32122 |
| AJT60838.1 | KP343639_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37991 | 38368 |
| AJT60829.1 | KP343639_p45 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 30717 | 30917 |
| AJT60790.1 | KP343639_p5 | tail fiber protein | phrog_13481 | tail fiber protein | tail | 1 | 8017 | 9903 |
| AJT60823.1 | KP343639_p39 | endonuclease-like protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 25431 | 25898 |
| AJT60814.1 | KP343639_p30 | RNA polymerase-like protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 21760 | 22173 |
| AJT60832.1 | KP343639_p48 | hypothetical protein | phrog_3986 | unknown function | unknown function | 1 | 32022 | 32504 |
| AJT60810.1 | KP343639_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17786 | 18073 |
| AJT60817.1 | KP343639_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23132 | 23467 |
| AJT60828.1 | KP343639_p44 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 30320 | 30697 |
| AJT60816.1 | KP343639_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22905 | 23135 |
| AJT60813.1 | KP343639_p29 | RNA polymerase-like protein | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 19197 | 21755 |
| AJT60825.1 | KP343639_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26304 | 26468 |
| AJT60815.1 | KP343639_p31 | hypothetical protein | phrog_31516 | unknown function | unknown function | 1 | 22194 | 22721 |
| AJT60804.1 | KP343639_p20 | hypothetical protein | phrog_37607 | unknown function | unknown function | 1 | 15956 | 16123 |
| AJT60819.1 | KP343639_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23807 | 23989 |
| AJT60791.1 | KP343639_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9800 | 10105 |
| AJT60808.1 | KP343639_p24 | hypothetical protein | phrog_35025 | unknown function | unknown function | 1 | 16724 | 17089 |
| AJT60795.1 | KP343639_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10907 | 11155 |
| AJT60821.1 | KP343639_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24518 | 24691 |
| AJT60787.1 | KP343639_p2 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 1249 | 1833 |
| AJT60839.1 | KP343639_p14 | hypothetical protein | phrog_871 | unknown function | unknown function | -1 | 13942 | 14169 |
| AJT60797.1 | KP343639_p12 | packaging maturation protein B | phrog_38 | terminase large subunit | head and packaging | 1 | 11206 | 12984 |
| AJT60788.1 | KP343639_p3 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 1843 | 4029 |
| AJT60792.1 | KP343639_p7 | hypothetical protein | phrog_8746 | tail fiber assembly protein | tail | 1 | 9921 | 10385 |
| AJT60796.1 | KP343639_p11 | packaging maturation protein A | phrog_1351 | terminase small subunit | head and packaging | 1 | 10911 | 11183 |
| AJT60837.1 | KP343639_p53 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 36481 | 37059 |
| AJT60830.1 | KP343639_p46 | exonuclease-like protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30914 | 31798 |
| AJT60794.1 | KP343639_p9 | lysis protein | phrog_920 | holin | lysis | 1 | 10705 | 10914 |
| AJT60789.1 | KP343639_p4 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 4048 | 7932 |
| AJT60811.1 | KP343639_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18168 | 18374 |
| AJT60806.1 | KP343639_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16418 | 16660 |
| AJT60786.1 | KP343639_p1 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 792 | 1256 |
| AJT60820.1 | KP343639_p36 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 24082 | 24537 |