Genomic map of Ralstonia phage phiITL-1 (KP343639)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP343639
Definition
Ralstonia phage phiITL-1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Serkorvirus; Ralstonia virus ITL1.
DB of origin
PVOG
Length
38731
Host Name
Ralstonia solanacearum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
62.75
Number of singletons
20
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AJT60793.1 KP343639_p8 hypothetical protein phrog_1233 unknown function unknown function 1 10382 10705
AJT60801.1 KP343639_p17 hypothetical protein singleton unknown function unknown function 1 15511 15720
AJT60799.1 KP343639_p15 hypothetical protein phrog_30187 unknown function unknown function 1 14799 15002
AJT60833.1 KP343639_p49 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 32507 32809
AJT60805.1 KP343639_p21 hypothetical protein singleton unknown function unknown function 1 16150 16416
AJT60826.1 KP343639_p42 DNA primase/helicase-like protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 26474 28162
AJT60803.1 KP343639_p19 hypothetical protein singleton unknown function unknown function 1 15747 15944
AJT60827.1 KP343639_p43 DNA polymerase-like protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 28172 30280
AJT60800.1 KP343639_p16 hypothetical protein singleton unknown function unknown function 1 15267 15506
AJT60807.1 KP343639_p23 hypothetical protein singleton unknown function unknown function 1 16608 16766
AJT60822.1 KP343639_p38 ssDNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 24757 25428
AJT60824.1 KP343639_p40 lysozyme-like protein phrog_822 amidase lysis 1 25829 26374
AJT60834.1 KP343639_p50 head to tail joining protein phrog_449 head-tail adaptor connector 1 32819 34414
AJT60809.1 KP343639_p25 hypothetical protein singleton unknown function unknown function 1 17086 17739
AJT60798.1 KP343639_p13 hypothetical protein singleton unknown function unknown function 1 13094 13357
AJT60818.1 KP343639_p34 hypothetical protein phrog_30269 unknown function unknown function 1 23535 23843
AJT60835.1 KP343639_p51 capsid assembly protein phrog_1052 head assembly head and packaging 1 34472 35302
AJT60802.1 KP343639_p18 hypothetical protein singleton unknown function unknown function 1 15671 15868
AJT60812.1 KP343639_p28 DNA ligase-like protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 18371 19300
AJT60836.1 KP343639_p52 major capsid protein phrog_267 major head protein head and packaging 1 35418 36374
AJT60831.1 KP343639_p47 hypothetical protein singleton unknown function unknown function 1 31820 32122
AJT60838.1 KP343639_p54 hypothetical protein singleton unknown function unknown function 1 37991 38368
AJT60829.1 KP343639_p45 hypothetical protein phrog_1334 unknown function unknown function 1 30717 30917
AJT60790.1 KP343639_p5 tail fiber protein phrog_13481 tail fiber protein tail 1 8017 9903
AJT60823.1 KP343639_p39 endonuclease-like protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 25431 25898
AJT60814.1 KP343639_p30 RNA polymerase-like protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 21760 22173
AJT60832.1 KP343639_p48 hypothetical protein phrog_3986 unknown function unknown function 1 32022 32504
AJT60810.1 KP343639_p26 hypothetical protein singleton unknown function unknown function 1 17786 18073
AJT60817.1 KP343639_p33 hypothetical protein singleton unknown function unknown function 1 23132 23467
AJT60828.1 KP343639_p44 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 30320 30697
AJT60816.1 KP343639_p32 hypothetical protein singleton unknown function unknown function 1 22905 23135
AJT60813.1 KP343639_p29 RNA polymerase-like protein phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 19197 21755
AJT60825.1 KP343639_p41 hypothetical protein singleton unknown function unknown function 1 26304 26468
AJT60815.1 KP343639_p31 hypothetical protein phrog_31516 unknown function unknown function 1 22194 22721
AJT60804.1 KP343639_p20 hypothetical protein phrog_37607 unknown function unknown function 1 15956 16123
AJT60819.1 KP343639_p35 hypothetical protein singleton unknown function unknown function 1 23807 23989
AJT60791.1 KP343639_p6 hypothetical protein singleton unknown function unknown function 1 9800 10105
AJT60808.1 KP343639_p24 hypothetical protein phrog_35025 unknown function unknown function 1 16724 17089
AJT60795.1 KP343639_p10 hypothetical protein singleton unknown function unknown function 1 10907 11155
AJT60821.1 KP343639_p37 hypothetical protein singleton unknown function unknown function 1 24518 24691
AJT60787.1 KP343639_p2 internal virion protein B phrog_805 internal virion protein head and packaging 1 1249 1833
AJT60839.1 KP343639_p14 hypothetical protein phrog_871 unknown function unknown function -1 13942 14169
AJT60797.1 KP343639_p12 packaging maturation protein B phrog_38 terminase large subunit head and packaging 1 11206 12984
AJT60788.1 KP343639_p3 internal virion protein C phrog_1339 internal virion protein head and packaging 1 1843 4029
AJT60792.1 KP343639_p7 hypothetical protein phrog_8746 tail fiber assembly protein tail 1 9921 10385
AJT60796.1 KP343639_p11 packaging maturation protein A phrog_1351 terminase small subunit head and packaging 1 10911 11183
AJT60837.1 KP343639_p53 tail tubular protein A phrog_446 tail protein tail 1 36481 37059
AJT60830.1 KP343639_p46 exonuclease-like protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 30914 31798
AJT60794.1 KP343639_p9 lysis protein phrog_920 holin lysis 1 10705 10914
AJT60789.1 KP343639_p4 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 4048 7932
AJT60811.1 KP343639_p27 hypothetical protein singleton unknown function unknown function 1 18168 18374
AJT60806.1 KP343639_p22 hypothetical protein singleton unknown function unknown function 1 16418 16660
AJT60786.1 KP343639_p1 internal virion protein A phrog_308 internal virion protein head and packaging 1 792 1256
AJT60820.1 KP343639_p36 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 24082 24537