| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793101 |
Definition |
Lactococcus phage 936 group phage Phi4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28764 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
35.14 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63059.1 | KP793101_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16145 | 16951 |
| ALM63072.1 | KP793101_p33 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 20829 | 21074 |
| ALM63045.1 | KP793101_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4351 | 5505 |
| ALM63079.1 | KP793101_p40 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23640 | 24047 |
| ALM63043.1 | KP793101_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2723 | 3841 |
| ALM63068.1 | KP793101_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19950 | 20399 |
| ALM63062.1 | KP793101_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18120 | 18389 |
| ALM63060.1 | KP793101_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16972 | 17325 |
| ALM63040.1 | KP793101_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 271 | 795 |
| ALM63063.1 | KP793101_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18504 | 18635 |
| ALM63048.1 | KP793101_p9 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6128 | 6625 |
| ALM63056.1 | KP793101_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13849 | 14655 |
| ALM63053.1 | KP793101_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10292 | 10567 |
| ALM63046.1 | KP793101_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5554 | 5817 |
| ALM63070.1 | KP793101_p31 | hypothetical protein | phrog_19708 | unknown function | unknown function | -1 | 20515 | 20709 |
| ALM63044.1 | KP793101_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3822 | 4358 |
| ALM63066.1 | KP793101_p27 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 19341 | 19532 |
| ALM63058.1 | KP793101_p19 | strucural protein 9 | phrog_1434 | unknown function | unknown function | 1 | 15862 | 16155 |
| ALM63088.1 | KP793101_p49 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27742 | 27873 |
| ALM63052.1 | KP793101_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9348 | 10253 |
| ALM63065.1 | KP793101_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18985 | 19218 |
| ALM63055.1 | KP793101_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11099 | 13849 |
| ALM63075.1 | KP793101_p36 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22008 | 22223 |
| ALM63089.1 | KP793101_p50 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27870 | 28352 |
| ALM63077.1 | KP793101_p38 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22602 | 23168 |
| ALM63074.1 | KP793101_p35 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21499 | 22011 |
| ALM63041.1 | KP793101_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 796 | 2418 |
| ALM63080.1 | KP793101_p41 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24197 | 24460 |
| ALM63061.1 | KP793101_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17322 | 18020 |
| ALM63076.1 | KP793101_p37 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22239 | 22598 |
| ALM63042.1 | KP793101_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2408 | 2692 |
| ALM63083.1 | KP793101_p44 | hypothetical protein | phrog_18661 | unknown function | unknown function | -1 | 25601 | 26014 |
| ALM63049.1 | KP793101_p10 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6615 | 6953 |
| ALM63090.1 | KP793101_p51 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28352 | 28519 |
| ALM63051.1 | KP793101_p12 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7366 | 9324 |
| ALM63086.1 | KP793101_p47 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 27291 | 27479 |
| ALM63082.1 | KP793101_p43 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24607 | 25557 |
| ALM63081.1 | KP793101_p42 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 24432 | 24614 |
| ALM63069.1 | KP793101_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20399 | 20518 |
| ALM63085.1 | KP793101_p46 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26260 | 26430 |
| ALM63073.1 | KP793101_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21112 | 21414 |
| ALM63078.1 | KP793101_p39 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23153 | 23653 |
| ALM63084.1 | KP793101_p45 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 26025 | 26225 |
| ALM63057.1 | KP793101_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14745 | 15872 |
| ALM63087.1 | KP793101_p48 | middle expressed protein 1 | phrog_5027 | unknown function | unknown function | 1 | 27510 | 27737 |
| ALM63071.1 | KP793101_p32 | hypothetical protein | phrog_30643 | unknown function | unknown function | -1 | 20678 | 20806 |
| ALM63047.1 | KP793101_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5817 | 6131 |
| ALM63064.1 | KP793101_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18638 | 18985 |
| ALM63050.1 | KP793101_p11 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6944 | 7309 |
| ALM63054.1 | KP793101_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10587 | 11099 |
| ALM63067.1 | KP793101_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19575 | 19826 |