Genomic map of Lactococcus phage 936 group phage PhiA.16 (KP793102)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793102
Definition
Lactococcus phage 936 group phage PhiA.16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
28349
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
35.24
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63095.1 KP793102_p5 protease phrog_80 head maturation protease head and packaging 1 3811 4347
ALM63102.1 KP793102_p12 major tail protein phrog_1433 major tail protein tail 1 8852 9757
ALM63137.1 KP793102_p47 middle expressed protein 2 phrog_1436 unknown function unknown function 1 27083 27214
ALM63136.1 KP793102_p46 middle expressed protein 1 phrog_1952 unknown function unknown function 1 26950 27078
ALM63105.1 KP793102_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10604 13354
ALM63117.1 KP793102_p27 hypothetical protein phrog_2530 unknown function unknown function -1 18772 18963
ALM63129.1 KP793102_p39 hypothetical protein phrog_1449 unknown function unknown function -1 23476 23859
ALM63131.1 KP793102_p41 hypothetical protein phrog_1405 unknown function unknown function -1 24033 24305
ALM63124.1 KP793102_p34 hypothetical protein phrog_1919 unknown function unknown function -1 21435 21737
ALM63116.1 KP793102_p26 hypothetical protein phrog_1820 unknown function unknown function -1 18582 18770
ALM63099.1 KP793102_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6116 6457
ALM63125.1 KP793102_p35 hypothetical protein phrog_1317 unknown function unknown function -1 21822 22334
ALM63110.1 KP793102_p20 holin phrog_1379 unknown function unknown function 1 16478 16831
ALM63130.1 KP793102_p40 hypothetical protein phrog_1632 unknown function unknown function -1 23699 23986
ALM63121.1 KP793102_p31 hypothetical protein phrog_19708 unknown function unknown function -1 19943 20095
ALM63138.1 KP793102_p48 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27211 27693
ALM63120.1 KP793102_p30 hypothetical protein phrog_1508 unknown function unknown function -1 19827 19946
ALM63092.1 KP793102_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 785 2407
ALM63101.1 KP793102_p11 neck passage structure phrog_2370 neck passage structure connector 1 6870 8828
ALM63091.1 KP793102_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 260 784
ALM63112.1 KP793102_p22 hypothetical protein phrog_1430 unknown function unknown function -1 17626 17895
ALM63135.1 KP793102_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26322 26813
ALM63100.1 KP793102_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6490 6813
ALM63097.1 KP793102_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5542 5805
ALM63094.1 KP793102_p4 portal protein phrog_12 portal protein head and packaging 1 2694 3830
ALM63123.1 KP793102_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 21146 21397
ALM63109.1 KP793102_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15651 16457
ALM63113.1 KP793102_p23 hypothetical protein phrog_8962 unknown function unknown function -1 17892 17993
ALM63111.1 KP793102_p21 lysin phrog_670 endolysin lysis 1 16828 17526
ALM63114.1 KP793102_p24 hypothetical protein phrog_1415 unknown function unknown function -1 18068 18415
ALM63107.1 KP793102_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14250 15377
ALM63122.1 KP793102_p32 hypothetical protein phrog_56 DNA methyltransferase other -1 20257 21153
ALM63104.1 KP793102_p14 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10092 10604
ALM63115.1 KP793102_p25 hypothetical protein phrog_1441 unknown function unknown function -1 18415 18582
ALM63119.1 KP793102_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19336 19827
ALM63134.1 KP793102_p44 hypothetical protein phrog_7549 unknown function unknown function -1 25383 25628
ALM63133.1 KP793102_p43 DNA polymerase phrog_1284 unknown function unknown function -1 24443 25339
ALM63132.1 KP793102_p42 hypothetical protein phrog_3604 unknown function unknown function -1 24268 24450
ALM63106.1 KP793102_p16 distal tail protein phrog_1424 tail protein tail 1 13354 14250
ALM63096.1 KP793102_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4340 5521
ALM63098.1 KP793102_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5805 6119
ALM63139.1 KP793102_p49 middle expressed protein 4 phrog_1652 unknown function unknown function 1 27693 27860
ALM63126.1 KP793102_p36 hypothetical protein phrog_1295 unknown function unknown function -1 22331 22546
ALM63118.1 KP793102_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19002 19253
ALM63093.1 KP793102_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2397 2681
ALM63128.1 KP793102_p38 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22923 23489
ALM63127.1 KP793102_p37 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22559 22918
ALM63108.1 KP793102_p18 hypothetical protein phrog_1434 unknown function unknown function 1 15367 15654
ALM63103.1 KP793102_p13 hypothetical protein phrog_1420 virion structural protein head and packaging 1 9797 10072