| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793102 |
Definition |
Lactococcus phage 936 group phage PhiA.16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28349 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
35.24 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63095.1 | KP793102_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3811 | 4347 |
| ALM63102.1 | KP793102_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8852 | 9757 |
| ALM63137.1 | KP793102_p47 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27083 | 27214 |
| ALM63136.1 | KP793102_p46 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 26950 | 27078 |
| ALM63105.1 | KP793102_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10604 | 13354 |
| ALM63117.1 | KP793102_p27 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18772 | 18963 |
| ALM63129.1 | KP793102_p39 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23476 | 23859 |
| ALM63131.1 | KP793102_p41 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24033 | 24305 |
| ALM63124.1 | KP793102_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21435 | 21737 |
| ALM63116.1 | KP793102_p26 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18582 | 18770 |
| ALM63099.1 | KP793102_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6116 | 6457 |
| ALM63125.1 | KP793102_p35 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21822 | 22334 |
| ALM63110.1 | KP793102_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16478 | 16831 |
| ALM63130.1 | KP793102_p40 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 23699 | 23986 |
| ALM63121.1 | KP793102_p31 | hypothetical protein | phrog_19708 | unknown function | unknown function | -1 | 19943 | 20095 |
| ALM63138.1 | KP793102_p48 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27211 | 27693 |
| ALM63120.1 | KP793102_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 19827 | 19946 |
| ALM63092.1 | KP793102_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 785 | 2407 |
| ALM63101.1 | KP793102_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6870 | 8828 |
| ALM63091.1 | KP793102_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 260 | 784 |
| ALM63112.1 | KP793102_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17626 | 17895 |
| ALM63135.1 | KP793102_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26322 | 26813 |
| ALM63100.1 | KP793102_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6490 | 6813 |
| ALM63097.1 | KP793102_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5542 | 5805 |
| ALM63094.1 | KP793102_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2694 | 3830 |
| ALM63123.1 | KP793102_p33 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21146 | 21397 |
| ALM63109.1 | KP793102_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15651 | 16457 |
| ALM63113.1 | KP793102_p23 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 17892 | 17993 |
| ALM63111.1 | KP793102_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16828 | 17526 |
| ALM63114.1 | KP793102_p24 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18068 | 18415 |
| ALM63107.1 | KP793102_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14250 | 15377 |
| ALM63122.1 | KP793102_p32 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 20257 | 21153 |
| ALM63104.1 | KP793102_p14 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10092 | 10604 |
| ALM63115.1 | KP793102_p25 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18415 | 18582 |
| ALM63119.1 | KP793102_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19336 | 19827 |
| ALM63134.1 | KP793102_p44 | hypothetical protein | phrog_7549 | unknown function | unknown function | -1 | 25383 | 25628 |
| ALM63133.1 | KP793102_p43 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24443 | 25339 |
| ALM63132.1 | KP793102_p42 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 24268 | 24450 |
| ALM63106.1 | KP793102_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13354 | 14250 |
| ALM63096.1 | KP793102_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4340 | 5521 |
| ALM63098.1 | KP793102_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5805 | 6119 |
| ALM63139.1 | KP793102_p49 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 27693 | 27860 |
| ALM63126.1 | KP793102_p36 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22331 | 22546 |
| ALM63118.1 | KP793102_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19002 | 19253 |
| ALM63093.1 | KP793102_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2397 | 2681 |
| ALM63128.1 | KP793102_p38 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22923 | 23489 |
| ALM63127.1 | KP793102_p37 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22559 | 22918 |
| ALM63108.1 | KP793102_p18 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15367 | 15654 |
| ALM63103.1 | KP793102_p13 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 9797 | 10072 |