| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793104 |
Definition |
Lactococcus phage 936 group phage PhiB1127, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28785 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.45 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63240.1 | KP793104_p51 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27656 | 27787 |
| ALM63238.1 | KP793104_p49 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 27204 | 27392 |
| ALM63201.1 | KP793104_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8458 | 9363 |
| ALM63219.1 | KP793104_p30 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19546 | 19743 |
| ALM63213.1 | KP793104_p24 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18115 | 18273 |
| ALM63208.1 | KP793104_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15453 | 15746 |
| ALM63193.1 | KP793104_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2696 | 3832 |
| ALM63216.1 | KP793104_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18784 | 18972 |
| ALM63231.1 | KP793104_p42 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23966 | 24157 |
| ALM63205.1 | KP793104_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10801 | 13440 |
| ALM63199.1 | KP793104_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6450 | 6815 |
| ALM63197.1 | KP793104_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5807 | 6121 |
| ALM63206.1 | KP793104_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13440 | 14336 |
| ALM63230.1 | KP793104_p41 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23431 | 23997 |
| ALM63214.1 | KP793104_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18270 | 18617 |
| ALM63228.1 | KP793104_p39 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22840 | 23055 |
| ALM63194.1 | KP793104_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3813 | 4349 |
| ALM63212.1 | KP793104_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17828 | 18097 |
| ALM63191.1 | KP793104_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 787 | 2409 |
| ALM63242.1 | KP793104_p53 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28263 | 28430 |
| ALM63215.1 | KP793104_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18617 | 18784 |
| ALM63226.1 | KP793104_p37 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21824 | 22249 |
| ALM63209.1 | KP793104_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15736 | 16548 |
| ALM63222.1 | KP793104_p33 | DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 20262 | 21152 |
| ALM63207.1 | KP793104_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14336 | 15463 |
| ALM63203.1 | KP793104_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9994 | 10269 |
| ALM63211.1 | KP793104_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 16913 | 17659 |
| ALM63241.1 | KP793104_p52 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27784 | 28266 |
| ALM63204.1 | KP793104_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10289 | 10801 |
| ALM63200.1 | KP793104_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6950 | 8434 |
| ALM63239.1 | KP793104_p50 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 27523 | 27651 |
| ALM63217.1 | KP793104_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 18965 | 19219 |
| ALM63196.1 | KP793104_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5544 | 5807 |
| ALM63218.1 | KP793104_p29 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19283 | 19471 |
| ALM63223.1 | KP793104_p34 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21145 | 21393 |
| ALM63202.1 | KP793104_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8458 | 9973 |
| ALM63190.1 | KP793104_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 262 | 786 |
| ALM63195.1 | KP793104_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4342 | 5523 |
| ALM63236.1 | KP793104_p47 | hypothetical protein | phrog_9199 | unknown function | unknown function | -1 | 26124 | 26285 |
| ALM63233.1 | KP793104_p44 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 24497 | 24877 |
| ALM63232.1 | KP793104_p43 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 24204 | 24494 |
| ALM63225.1 | KP793104_p36 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21519 | 21827 |
| ALM63235.1 | KP793104_p46 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 25184 | 26080 |
| ALM63234.1 | KP793104_p45 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24934 | 25191 |
| ALM63227.1 | KP793104_p38 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22331 | 22843 |
| ALM63210.1 | KP793104_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16563 | 16916 |
| ALM63221.1 | KP793104_p32 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20085 | 20204 |
| ALM63192.1 | KP793104_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2399 | 2683 |
| ALM63224.1 | KP793104_p35 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 21393 | 21503 |
| ALM63198.1 | KP793104_p9 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6118 | 6459 |
| ALM63237.1 | KP793104_p48 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26327 | 26491 |
| ALM63229.1 | KP793104_p40 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23068 | 23427 |
| ALM63220.1 | KP793104_p31 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19780 | 20085 |