Genomic map of Lactococcus phage 936 group phage PhiA1127 (KP793106)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793106
Definition
Lactococcus phage 936 group phage PhiA1127, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
28873
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
35.17
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63312.1 KP793106_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14711 15838
ALM63306.1 KP793106_p12 neck passage structure phrog_2370 neck passage structure connector 1 7330 9288
ALM63296.1 KP793106_p2 DNA methylase phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 782 1243
ALM63333.1 KP793106_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22476 23054
ALM63313.1 KP793106_p19 hypothetical protein phrog_1434 unknown function unknown function 1 15828 16121
ALM63300.1 KP793106_p6 protease phrog_80 head maturation protease head and packaging 1 4271 4807
ALM63338.1 KP793106_p44 hypothetical protein phrog_3604 unknown function unknown function -1 24318 24500
ALM63325.1 KP793106_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20272 20391
ALM63344.1 KP793106_p50 middle expressed protein 2 phrog_1436 unknown function unknown function 1 27600 27731
ALM63323.1 KP793106_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19447 19698
ALM63337.1 KP793106_p43 hypothetical protein phrog_1405 unknown function unknown function -1 24083 24346
ALM63328.1 KP793106_p34 hypothetical protein singleton unknown function unknown function -1 20848 20928
ALM63330.1 KP793106_p36 hypothetical protein phrog_1317 unknown function unknown function -1 21372 21884
ALM63305.1 KP793106_p11 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6908 7273
ALM63322.1 KP793106_p28 hypothetical protein phrog_2530 unknown function unknown function -1 19217 19408
ALM63342.1 KP793106_p48 hypothetical protein phrog_1656 unknown function unknown function -1 27149 27337
ALM63303.1 KP793106_p9 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 6265 6579
ALM63341.1 KP793106_p47 hypothetical protein phrog_5487 unknown function unknown function -1 26112 26291
ALM63302.1 KP793106_p8 strucural protein 1 phrog_1428 head-tail connector protein connector 1 6002 6265
ALM63327.1 KP793106_p33 hypothetical protein phrog_30643 unknown function unknown function -1 20551 20679
ALM63307.1 KP793106_p13 major tail protein phrog_1433 major tail protein tail 1 9313 10218
ALM63326.1 KP793106_p32 hypothetical protein phrog_19708 unknown function unknown function -1 20388 20540
ALM63343.1 KP793106_p49 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27467 27595
ALM63299.1 KP793106_p5 portal protein phrog_12 portal protein head and packaging 1 3154 4290
ALM63309.1 KP793106_p15 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 10553 11065
ALM63304.1 KP793106_p10 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6576 6917
ALM63339.1 KP793106_p45 DNA polymerase phrog_1284 unknown function unknown function -1 24493 25443
ALM63311.1 KP793106_p17 distal tail protein phrog_1424 tail protein tail 1 13815 14711
ALM63329.1 KP793106_p35 hypothetical protein phrog_1919 unknown function unknown function -1 20985 21287
ALM63334.1 KP793106_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23039 23539
ALM63301.1 KP793106_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4800 5981
ALM63316.1 KP793106_p22 lysin phrog_670 endolysin lysis 1 17288 17986
ALM63318.1 KP793106_p24 hypothetical protein phrog_3389 unknown function unknown function -1 18337 18510
ALM63317.1 KP793106_p23 hypothetical protein phrog_1430 unknown function unknown function -1 18071 18340
ALM63319.1 KP793106_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18513 18860
ALM63297.1 KP793106_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1245 2867
ALM63346.1 KP793106_p52 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28210 28377
ALM63298.1 KP793106_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2857 3141
ALM63310.1 KP793106_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11065 13815
ALM63320.1 KP793106_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18860 19027
ALM63314.1 KP793106_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16111 16917
ALM63340.1 KP793106_p46 hypothetical protein phrog_18661 unknown function unknown function -1 25487 25900
ALM63345.1 KP793106_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27728 28210
ALM63295.1 KP793106_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 261 785
ALM63321.1 KP793106_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19027 19224
ALM63332.1 KP793106_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22112 22471
ALM63308.1 KP793106_p14 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 10258 10533
ALM63331.1 KP793106_p37 hypothetical protein phrog_1295 unknown function unknown function -1 21881 22096
ALM63336.1 KP793106_p42 hypothetical protein phrog_1632 unknown function unknown function -1 23749 24036
ALM63324.1 KP793106_p30 sensitivity to AbiV phrog_1225 unknown function unknown function -1 19781 20272
ALM63335.1 KP793106_p41 hypothetical protein phrog_1449 unknown function unknown function -1 23526 23792
ALM63315.1 KP793106_p21 holin phrog_1379 unknown function unknown function 1 16983 17291