| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793106 |
Definition |
Lactococcus phage 936 group phage PhiA1127, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28873 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
35.17 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63312.1 | KP793106_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14711 | 15838 |
| ALM63306.1 | KP793106_p12 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7330 | 9288 |
| ALM63296.1 | KP793106_p2 | DNA methylase | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 782 | 1243 |
| ALM63333.1 | KP793106_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22476 | 23054 |
| ALM63313.1 | KP793106_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15828 | 16121 |
| ALM63300.1 | KP793106_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4271 | 4807 |
| ALM63338.1 | KP793106_p44 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 24318 | 24500 |
| ALM63325.1 | KP793106_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20272 | 20391 |
| ALM63344.1 | KP793106_p50 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27600 | 27731 |
| ALM63323.1 | KP793106_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19447 | 19698 |
| ALM63337.1 | KP793106_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24083 | 24346 |
| ALM63328.1 | KP793106_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20848 | 20928 |
| ALM63330.1 | KP793106_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21372 | 21884 |
| ALM63305.1 | KP793106_p11 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6908 | 7273 |
| ALM63322.1 | KP793106_p28 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 19217 | 19408 |
| ALM63342.1 | KP793106_p48 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 27149 | 27337 |
| ALM63303.1 | KP793106_p9 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6265 | 6579 |
| ALM63341.1 | KP793106_p47 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26112 | 26291 |
| ALM63302.1 | KP793106_p8 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 6002 | 6265 |
| ALM63327.1 | KP793106_p33 | hypothetical protein | phrog_30643 | unknown function | unknown function | -1 | 20551 | 20679 |
| ALM63307.1 | KP793106_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9313 | 10218 |
| ALM63326.1 | KP793106_p32 | hypothetical protein | phrog_19708 | unknown function | unknown function | -1 | 20388 | 20540 |
| ALM63343.1 | KP793106_p49 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 27467 | 27595 |
| ALM63299.1 | KP793106_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3154 | 4290 |
| ALM63309.1 | KP793106_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10553 | 11065 |
| ALM63304.1 | KP793106_p10 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6576 | 6917 |
| ALM63339.1 | KP793106_p45 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24493 | 25443 |
| ALM63311.1 | KP793106_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13815 | 14711 |
| ALM63329.1 | KP793106_p35 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 20985 | 21287 |
| ALM63334.1 | KP793106_p40 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23039 | 23539 |
| ALM63301.1 | KP793106_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4800 | 5981 |
| ALM63316.1 | KP793106_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17288 | 17986 |
| ALM63318.1 | KP793106_p24 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18337 | 18510 |
| ALM63317.1 | KP793106_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18071 | 18340 |
| ALM63319.1 | KP793106_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18513 | 18860 |
| ALM63297.1 | KP793106_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1245 | 2867 |
| ALM63346.1 | KP793106_p52 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28210 | 28377 |
| ALM63298.1 | KP793106_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2857 | 3141 |
| ALM63310.1 | KP793106_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11065 | 13815 |
| ALM63320.1 | KP793106_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18860 | 19027 |
| ALM63314.1 | KP793106_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16111 | 16917 |
| ALM63340.1 | KP793106_p46 | hypothetical protein | phrog_18661 | unknown function | unknown function | -1 | 25487 | 25900 |
| ALM63345.1 | KP793106_p51 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27728 | 28210 |
| ALM63295.1 | KP793106_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 261 | 785 |
| ALM63321.1 | KP793106_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19027 | 19224 |
| ALM63332.1 | KP793106_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22112 | 22471 |
| ALM63308.1 | KP793106_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10258 | 10533 |
| ALM63331.1 | KP793106_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 21881 | 22096 |
| ALM63336.1 | KP793106_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 23749 | 24036 |
| ALM63324.1 | KP793106_p30 | sensitivity to AbiV | phrog_1225 | unknown function | unknown function | -1 | 19781 | 20272 |
| ALM63335.1 | KP793106_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23526 | 23792 |
| ALM63315.1 | KP793106_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16983 | 17291 |