| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793107 |
Definition |
Lactococcus phage 936 group phage PhiD.18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28833 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.31 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63388.1 | KP793107_p42 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 23510 | 23890 |
| ALM63364.1 | KP793107_p18 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15192 | 15485 |
| ALM63381.1 | KP793107_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20852 | 21277 |
| ALM63351.1 | KP793107_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3811 | 4347 |
| ALM63367.1 | KP793107_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16656 | 17360 |
| ALM63361.1 | KP793107_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10180 | 13179 |
| ALM63362.1 | KP793107_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13179 | 14075 |
| ALM63376.1 | KP793107_p30 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19699 | 20007 |
| ALM63387.1 | KP793107_p41 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 23223 | 23513 |
| ALM63350.1 | KP793107_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2694 | 3830 |
| ALM63354.1 | KP793107_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5805 | 6119 |
| ALM63389.1 | KP793107_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 23947 | 24204 |
| ALM63395.1 | KP793107_p49 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26647 | 27138 |
| ALM63383.1 | KP793107_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 21868 | 22083 |
| ALM63370.1 | KP793107_p24 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 18238 | 18339 |
| ALM63358.1 | KP793107_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8430 | 9335 |
| ALM63366.1 | KP793107_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16306 | 16659 |
| ALM63393.1 | KP793107_p47 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 25621 | 25785 |
| ALM63353.1 | KP793107_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5542 | 5805 |
| ALM63379.1 | KP793107_p33 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 20426 | 20536 |
| ALM63397.1 | KP793107_p51 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27407 | 27538 |
| ALM63365.1 | KP793107_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15475 | 16284 |
| ALM63377.1 | KP793107_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20007 | 20126 |
| ALM63368.1 | KP793107_p22 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 17438 | 17914 |
| ALM63375.1 | KP793107_p29 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19425 | 19622 |
| ALM63394.1 | KP793107_p48 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 26288 | 26407 |
| ALM63373.1 | KP793107_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18928 | 19104 |
| ALM63363.1 | KP793107_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14075 | 15202 |
| ALM63380.1 | KP793107_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 20526 | 20855 |
| ALM63382.1 | KP793107_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21359 | 21871 |
| ALM63390.1 | KP793107_p44 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24197 | 25147 |
| ALM63349.1 | KP793107_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2396 | 2680 |
| ALM63347.1 | KP793107_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 259 | 783 |
| ALM63371.1 | KP793107_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18414 | 18761 |
| ALM63372.1 | KP793107_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18761 | 18928 |
| ALM63391.1 | KP793107_p45 | hypothetical protein | phrog_12970 | unknown function | unknown function | -1 | 25229 | 25426 |
| ALM63360.1 | KP793107_p14 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 9668 | 10180 |
| ALM63359.1 | KP793107_p13 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 9373 | 9648 |
| ALM63355.1 | KP793107_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6116 | 6457 |
| ALM63399.1 | KP793107_p53 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28014 | 28181 |
| ALM63352.1 | KP793107_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4340 | 5521 |
| ALM63348.1 | KP793107_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 784 | 2406 |
| ALM63356.1 | KP793107_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6448 | 6813 |
| ALM63357.1 | KP793107_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6869 | 8407 |
| ALM63369.1 | KP793107_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17975 | 18241 |
| ALM63396.1 | KP793107_p50 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 27274 | 27414 |
| ALM63398.1 | KP793107_p52 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27535 | 28017 |
| ALM63374.1 | KP793107_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19097 | 19345 |
| ALM63392.1 | KP793107_p46 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 25448 | 25606 |
| ALM63384.1 | KP793107_p38 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22099 | 22458 |
| ALM63386.1 | KP793107_p40 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 22985 | 23197 |
| ALM63385.1 | KP793107_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22462 | 23016 |
| ALM63378.1 | KP793107_p32 | hypothetical protein | phrog_28015 | unknown function | unknown function | -1 | 20231 | 20410 |