Genomic map of Lactococcus phage 936 group phage PhiD.18 (KP793107)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793107
Definition
Lactococcus phage 936 group phage PhiD.18, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
28833
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
35.31
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63388.1 KP793107_p42 hypothetical protein phrog_2228 unknown function unknown function -1 23510 23890
ALM63364.1 KP793107_p18 hypothetical protein phrog_1434 unknown function unknown function 1 15192 15485
ALM63381.1 KP793107_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20852 21277
ALM63351.1 KP793107_p5 protease phrog_80 head maturation protease head and packaging 1 3811 4347
ALM63367.1 KP793107_p21 lysin phrog_670 endolysin lysis 1 16656 17360
ALM63361.1 KP793107_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10180 13179
ALM63362.1 KP793107_p16 distal tail protein phrog_1424 tail protein tail 1 13179 14075
ALM63376.1 KP793107_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19699 20007
ALM63387.1 KP793107_p41 hypothetical protein phrog_1632 unknown function unknown function -1 23223 23513
ALM63350.1 KP793107_p4 portal protein phrog_12 portal protein head and packaging 1 2694 3830
ALM63354.1 KP793107_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5805 6119
ALM63389.1 KP793107_p43 hypothetical protein phrog_1405 unknown function unknown function -1 23947 24204
ALM63395.1 KP793107_p49 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26647 27138
ALM63383.1 KP793107_p37 hypothetical protein phrog_1295 unknown function unknown function -1 21868 22083
ALM63370.1 KP793107_p24 hypothetical protein phrog_8962 unknown function unknown function -1 18238 18339
ALM63358.1 KP793107_p12 major tail protein phrog_1433 major tail protein tail 1 8430 9335
ALM63366.1 KP793107_p20 holin phrog_1379 unknown function unknown function 1 16306 16659
ALM63393.1 KP793107_p47 hypothetical protein phrog_5487 unknown function unknown function -1 25621 25785
ALM63353.1 KP793107_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5542 5805
ALM63379.1 KP793107_p33 hypothetical protein phrog_4546 unknown function unknown function -1 20426 20536
ALM63397.1 KP793107_p51 middle expressed protein 2 phrog_1436 unknown function unknown function 1 27407 27538
ALM63365.1 KP793107_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15475 16284
ALM63377.1 KP793107_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20007 20126
ALM63368.1 KP793107_p22 hypothetical protein phrog_3874 transglycosylase other -1 17438 17914
ALM63375.1 KP793107_p29 hypothetical protein phrog_6037 unknown function unknown function -1 19425 19622
ALM63394.1 KP793107_p48 hypothetical protein phrog_2413 unknown function unknown function -1 26288 26407
ALM63373.1 KP793107_p27 hypothetical protein phrog_1820 unknown function unknown function -1 18928 19104
ALM63363.1 KP793107_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14075 15202
ALM63380.1 KP793107_p34 hypothetical protein phrog_1919 unknown function unknown function -1 20526 20855
ALM63382.1 KP793107_p36 hypothetical protein phrog_1317 unknown function unknown function -1 21359 21871
ALM63390.1 KP793107_p44 DNA polymerase phrog_1284 unknown function unknown function -1 24197 25147
ALM63349.1 KP793107_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2396 2680
ALM63347.1 KP793107_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 259 783
ALM63371.1 KP793107_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18414 18761
ALM63372.1 KP793107_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18761 18928
ALM63391.1 KP793107_p45 hypothetical protein phrog_12970 unknown function unknown function -1 25229 25426
ALM63360.1 KP793107_p14 hypothetical protein phrog_1421 virion structural protein head and packaging 1 9668 10180
ALM63359.1 KP793107_p13 hypothetical protein phrog_1420 virion structural protein head and packaging 1 9373 9648
ALM63355.1 KP793107_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6116 6457
ALM63399.1 KP793107_p53 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28014 28181
ALM63352.1 KP793107_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4340 5521
ALM63348.1 KP793107_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 784 2406
ALM63356.1 KP793107_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6448 6813
ALM63357.1 KP793107_p11 neck passage structure phrog_2370 neck passage structure connector 1 6869 8407
ALM63369.1 KP793107_p23 hypothetical protein phrog_1430 unknown function unknown function -1 17975 18241
ALM63396.1 KP793107_p50 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27274 27414
ALM63398.1 KP793107_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27535 28017
ALM63374.1 KP793107_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19097 19345
ALM63392.1 KP793107_p46 hypothetical protein phrog_4505 unknown function unknown function -1 25448 25606
ALM63384.1 KP793107_p38 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22099 22458
ALM63386.1 KP793107_p40 hypothetical protein phrog_1449 unknown function unknown function -1 22985 23197
ALM63385.1 KP793107_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22462 23016
ALM63378.1 KP793107_p32 hypothetical protein phrog_28015 unknown function unknown function -1 20231 20410