Genomic map of Lactococcus phage 936 group phage Phi5.12 (KP793108)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793108
Definition
Lactococcus phage 936 group phage Phi5.12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
29026
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.74
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63442.1 KP793108_p43 hypothetical protein phrog_1632 unknown function unknown function -1 24632 24922
ALM63433.1 KP793108_p34 hypothetical protein phrog_3972 unknown function unknown function -1 20199 20543
ALM63403.1 KP793108_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2848 3132
ALM63439.1 KP793108_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23062 23616
ALM63438.1 KP793108_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22699 23058
ALM63418.1 KP793108_p19 hypothetical protein phrog_1434 unknown function unknown function 1 14661 14954
ALM63402.1 KP793108_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1236 2858
ALM63421.1 KP793108_p22 lysin phrog_670 endolysin lysis 1 16109 16816
ALM63411.1 KP793108_p13 major tail protein phrog_1433 major tail protein tail 1 7276 8181
ALM63401.1 KP793108_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 773 1234
ALM63432.1 KP793108_p33 hypothetical protein phrog_1083 unknown function unknown function -1 19873 20196
ALM63427.1 KP793108_p28 hypothetical protein phrog_1509 unknown function unknown function -1 18579 18833
ALM63410.1 KP793108_p11 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6898 7263
ALM63419.1 KP793108_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 14944 15738
ALM63450.1 KP793108_p51 middle expressed protein 2 phrog_1436 unknown function unknown function 1 28045 28176
ALM63443.1 KP793108_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25005 25268
ALM63426.1 KP793108_p27 hypothetical protein phrog_1820 unknown function unknown function -1 18410 18586
ALM63425.1 KP793108_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18243 18410
ALM63451.1 KP793108_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28173 28655
ALM63409.1 KP793108_p10 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6566 6907
ALM63437.1 KP793108_p38 hypothetical protein phrog_1295 unknown function unknown function -1 22474 22686
ALM63407.1 KP793108_p8 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5992 6255
ALM63420.1 KP793108_p21 holin phrog_1379 unknown function unknown function 1 15759 16112
ALM63448.1 KP793108_p49 hypothetical protein phrog_1656 unknown function unknown function -1 27593 27781
ALM63436.1 KP793108_p37 hypothetical protein phrog_1317 unknown function unknown function -1 21968 22477
ALM63413.1 KP793108_p14 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 8842 9117
ALM63444.1 KP793108_p45 hypothetical protein phrog_3604 unknown function unknown function -1 25255 25452
ALM63405.1 KP793108_p6 protease phrog_80 head maturation protease head and packaging 1 4261 4797
ALM63423.1 KP793108_p24 hypothetical protein phrog_1430 unknown function unknown function -1 17545 17817
ALM63449.1 KP793108_p50 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27912 28040
ALM63440.1 KP793108_p41 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23613 24425
ALM63404.1 KP793108_p5 portal protein phrog_12 portal protein head and packaging 1 3126 4280
ALM63424.1 KP793108_p25 hypothetical protein phrog_1415 unknown function unknown function -1 17896 18243
ALM63406.1 KP793108_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4790 5971
ALM63412.1 KP793108_p12 major tail protein extension phrog_3791 major tail protein tail 1 7276 8821
ALM63428.1 KP793108_p29 hypothetical protein phrog_3365 unknown function unknown function -1 18896 19084
ALM63417.1 KP793108_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 13544 14671
ALM63445.1 KP793108_p46 DNA polymerase phrog_1284 unknown function unknown function -1 25445 26341
ALM63434.1 KP793108_p35 methylase phrog_56 DNA methyltransferase other -1 20605 21648
ALM63414.1 KP793108_p15 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 9137 9649
ALM63415.1 KP793108_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 9649 12648
ALM63452.1 KP793108_p53 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28652 28819
ALM63447.1 KP793108_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27060 27179
ALM63422.1 KP793108_p23 hypothetical protein phrog_3874 transglycosylase other -1 16966 17484
ALM63416.1 KP793108_p17 distal tail protein phrog_1424 tail protein tail 1 12648 13544
ALM63429.1 KP793108_p30 hypothetical protein phrog_6037 unknown function unknown function -1 19160 19357
ALM63435.1 KP793108_p36 hypothetical protein phrog_1825 DNA methyltransferase other -1 21641 21889
ALM63431.1 KP793108_p32 hypothetical protein phrog_1508 unknown function unknown function -1 19743 19862
ALM63400.1 KP793108_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ALM63408.1 KP793108_p9 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 6255 6569
ALM63446.1 KP793108_p47 hypothetical protein phrog_4505 unknown function unknown function -1 26398 26583
ALM63441.1 KP793108_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24412 24678
ALM63430.1 KP793108_p31 hypothetical protein phrog_1225 unknown function unknown function -1 19434 19742