Genomic map of Lactococcus phage 936 group phage PhiC0139 (KP793109)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793109
Definition
Lactococcus phage 936 group phage PhiC0139, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
29032
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
35.36
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63456.1 KP793109_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ALM63495.1 KP793109_p43 hypothetical protein phrog_2228 unknown function unknown function -1 24497 24877
ALM63503.1 KP793109_p51 middle expressed protein 2 phrog_1436 unknown function unknown function 1 27903 28034
ALM63468.1 KP793109_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 10801 13440
ALM63453.1 KP793109_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ALM63472.1 KP793109_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15736 16548
ALM63488.1 KP793109_p36 hypothetical protein phrog_1919 unknown function unknown function -1 21519 21827
ALM63501.1 KP793109_p49 hypothetical protein phrog_1656 unknown function unknown function -1 27461 27640
ALM63464.1 KP793109_p13 major tail protein phrog_1433 major tail protein tail 1 8458 9363
ALM63458.1 KP793109_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ALM63485.1 KP793109_p33 hypothetical protein phrog_56 DNA methyltransferase other -1 20262 21152
ALM63476.1 KP793109_p24 hypothetical protein phrog_3389 unknown function unknown function -1 18115 18273
ALM63479.1 KP793109_p27 hypothetical protein phrog_1820 unknown function unknown function -1 18784 18972
ALM63490.1 KP793109_p38 hypothetical protein phrog_1317 unknown function unknown function -1 22331 22843
ALM63483.1 KP793109_p31 hypothetical protein phrog_1225 unknown function unknown function -1 19780 20085
ALM63460.1 KP793109_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ALM63475.1 KP793109_p23 hypothetical protein phrog_1430 unknown function unknown function -1 17828 18097
ALM63474.1 KP793109_p22 lysin phrog_670 endolysin lysis 1 16913 17659
ALM63505.1 KP793109_p53 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28510 28677
ALM63498.1 KP793109_p46 hypothetical protein phrog_9199 unknown function unknown function -1 26178 26339
ALM63482.1 KP793109_p30 hypothetical protein phrog_6037 unknown function unknown function -1 19546 19743
ALM63481.1 KP793109_p29 hypothetical protein phrog_3365 unknown function unknown function -1 19283 19471
ALM63504.1 KP793109_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28031 28513
ALM63502.1 KP793109_p50 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27770 27898
ALM63465.1 KP793109_p12 major tail protein extension phrog_3791 major tail protein tail 1 8458 9973
ALM63487.1 KP793109_p35 hypothetical protein phrog_4546 unknown function unknown function -1 21393 21503
ALM63467.1 KP793109_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10289 10801
ALM63480.1 KP793109_p28 hypothetical protein phrog_1509 unknown function unknown function -1 18965 19219
ALM63494.1 KP793109_p42 hypothetical protein phrog_1449 unknown function unknown function -1 23966 24367
ALM63473.1 KP793109_p21 holin phrog_1379 unknown function unknown function 1 16563 16916
ALM63493.1 KP793109_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23431 23997
ALM63470.1 KP793109_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14336 15463
ALM63478.1 KP793109_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18617 18784
ALM63492.1 KP793109_p40 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23067 23426
ALM63459.1 KP793109_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ALM63499.1 KP793109_p47 hypothetical protein phrog_5487 unknown function unknown function -1 26381 26545
ALM63466.1 KP793109_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 9994 10269
ALM63496.1 KP793109_p44 hypothetical protein phrog_1405 unknown function unknown function -1 24934 25191
ALM63500.1 KP793109_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27030 27158
ALM63462.1 KP793109_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ALM63484.1 KP793109_p32 hypothetical protein phrog_1508 unknown function unknown function -1 20085 20204
ALM63461.1 KP793109_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ALM63491.1 KP793109_p39 hypothetical protein phrog_1295 unknown function unknown function -1 22809 23054
ALM63489.1 KP793109_p37 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21824 22249
ALM63454.1 KP793109_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ALM63469.1 KP793109_p17 distal tail protein phrog_1424 tail protein tail 1 13440 14336
ALM63457.1 KP793109_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ALM63486.1 KP793109_p34 hypothetical protein phrog_1825 DNA methyltransferase other -1 21145 21393
ALM63497.1 KP793109_p45 DNA polymerase phrog_1284 unknown function unknown function -1 25184 26134
ALM63455.1 KP793109_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ALM63463.1 KP793109_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8434
ALM63477.1 KP793109_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18270 18617
ALM63471.1 KP793109_p19 hypothetical protein phrog_1434 unknown function unknown function 1 15453 15746