Genomic map of Lactococcus phage 936 group phage Phi43 (KP793110)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793110
Definition
Lactococcus phage 936 group phage Phi43, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
29416
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
35.07
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63553.1 KP793110_p48 hypothetical protein phrog_5487 unknown function unknown function -1 26100 26264
ALM63552.1 KP793110_p47 hypothetical protein phrog_4505 unknown function unknown function -1 25927 26085
ALM63558.1 KP793110_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28171 28653
ALM63513.1 KP793110_p8 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 5784 6098
ALM63542.1 KP793110_p37 hypothetical protein phrog_1295 unknown function unknown function -1 21853 22068
ALM63540.1 KP793110_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20835 21260
ALM63547.1 KP793110_p42 hypothetical protein phrog_1632 unknown function unknown function -1 23702 23992
ALM63512.1 KP793110_p7 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5521 5784
ALM63507.1 KP793110_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 763 2385
ALM63526.1 KP793110_p21 lysin phrog_670 endolysin lysis 1 16636 17340
ALM63520.1 KP793110_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10159 13158
ALM63530.1 KP793110_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18393 18740
ALM63548.1 KP793110_p43 hypothetical protein phrog_2228 unknown function unknown function -1 23989 24369
ALM63534.1 KP793110_p29 hypothetical protein phrog_6037 unknown function unknown function -1 19404 19601
ALM63517.1 KP793110_p12 major tail protein phrog_1433 major tail protein tail 1 8409 9314
ALM63531.1 KP793110_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18740 18907
ALM63557.1 KP793110_p52 middle expressed protein 2 phrog_1436 unknown function unknown function 1 28043 28174
ALM63538.1 KP793110_p33 hypothetical protein phrog_4546 unknown function unknown function -1 20409 20519
ALM63555.1 KP793110_p50 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27283 27774
ALM63514.1 KP793110_p9 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6095 6436
ALM63519.1 KP793110_p14 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 9647 10159
ALM63511.1 KP793110_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4319 5500
ALM63508.1 KP793110_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2375 2659
ALM63549.1 KP793110_p44 hypothetical protein phrog_1405 unknown function unknown function -1 24426 24683
ALM63537.1 KP793110_p32 hypothetical protein phrog_1825 DNA methyltransferase other -1 20167 20409
ALM63528.1 KP793110_p23 hypothetical protein phrog_1430 unknown function unknown function -1 17954 18220
ALM63523.1 KP793110_p18 hypothetical protein phrog_1434 unknown function unknown function 1 15172 15465
ALM63522.1 KP793110_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14055 15182
ALM63551.1 KP793110_p46 hypothetical protein phrog_12970 unknown function unknown function -1 25708 25905
ALM63546.1 KP793110_p41 hypothetical protein phrog_1449 unknown function unknown function -1 23482 23655
ALM63521.1 KP793110_p16 distal tail protein phrog_1424 tail protein tail 1 13158 14036
ALM63516.1 KP793110_p11 neck passage structure phrog_2370 neck passage structure connector 1 6848 8386
ALM63509.1 KP793110_p4 portal protein phrog_12 portal protein head and packaging 1 2673 3809
ALM63544.1 KP793110_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22444 22998
ALM63541.1 KP793110_p36 hypothetical protein phrog_1317 unknown function unknown function -1 21344 21856
ALM63529.1 KP793110_p24 hypothetical protein phrog_8962 unknown function unknown function -1 18217 18318
ALM63515.1 KP793110_p10 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6427 6792
ALM63527.1 KP793110_p22 hypothetical protein phrog_3874 transglycosylase other -1 17417 17893
ALM63550.1 KP793110_p45 DNA polymerase phrog_1284 unknown function unknown function -1 24676 25626
ALM63559.1 KP793110_p54 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28650 28817
ALM63545.1 KP793110_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22995 23495
ALM63506.1 KP793110_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 238 762
ALM63539.1 KP793110_p34 hypothetical protein phrog_1919 unknown function unknown function -1 20509 20838
ALM63543.1 KP793110_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22096 22440
ALM63510.1 KP793110_p5 protease phrog_80 head maturation protease head and packaging 1 3790 4326
ALM63525.1 KP793110_p20 holin phrog_1379 unknown function unknown function 1 16286 16639
ALM63524.1 KP793110_p19 receptor protein phrog_1630 receptor binding tail protein tail 1 15455 16264
ALM63536.1 KP793110_p31 hypothetical protein phrog_1508 unknown function unknown function -1 19990 20109
ALM63518.1 KP793110_p13 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 9352 9627
ALM63533.1 KP793110_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19076 19324
ALM63556.1 KP793110_p51 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27910 28050
ALM63554.1 KP793110_p49 hypothetical protein phrog_2413 unknown function unknown function -1 26768 26929
ALM63535.1 KP793110_p30 hypothetical protein singleton unknown function unknown function -1 19816 19989
ALM63532.1 KP793110_p27 hypothetical protein phrog_1820 unknown function unknown function -1 18907 19083