| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793110 |
Definition |
Lactococcus phage 936 group phage Phi43, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
29416 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
35.07 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63553.1 | KP793110_p48 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26100 | 26264 |
| ALM63552.1 | KP793110_p47 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 25927 | 26085 |
| ALM63558.1 | KP793110_p53 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28171 | 28653 |
| ALM63513.1 | KP793110_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5784 | 6098 |
| ALM63542.1 | KP793110_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 21853 | 22068 |
| ALM63540.1 | KP793110_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20835 | 21260 |
| ALM63547.1 | KP793110_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 23702 | 23992 |
| ALM63512.1 | KP793110_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5521 | 5784 |
| ALM63507.1 | KP793110_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 763 | 2385 |
| ALM63526.1 | KP793110_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16636 | 17340 |
| ALM63520.1 | KP793110_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10159 | 13158 |
| ALM63530.1 | KP793110_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18393 | 18740 |
| ALM63548.1 | KP793110_p43 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 23989 | 24369 |
| ALM63534.1 | KP793110_p29 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19404 | 19601 |
| ALM63517.1 | KP793110_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8409 | 9314 |
| ALM63531.1 | KP793110_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18740 | 18907 |
| ALM63557.1 | KP793110_p52 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 28043 | 28174 |
| ALM63538.1 | KP793110_p33 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 20409 | 20519 |
| ALM63555.1 | KP793110_p50 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27283 | 27774 |
| ALM63514.1 | KP793110_p9 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6095 | 6436 |
| ALM63519.1 | KP793110_p14 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 9647 | 10159 |
| ALM63511.1 | KP793110_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4319 | 5500 |
| ALM63508.1 | KP793110_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2375 | 2659 |
| ALM63549.1 | KP793110_p44 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24426 | 24683 |
| ALM63537.1 | KP793110_p32 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 20167 | 20409 |
| ALM63528.1 | KP793110_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17954 | 18220 |
| ALM63523.1 | KP793110_p18 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15172 | 15465 |
| ALM63522.1 | KP793110_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14055 | 15182 |
| ALM63551.1 | KP793110_p46 | hypothetical protein | phrog_12970 | unknown function | unknown function | -1 | 25708 | 25905 |
| ALM63546.1 | KP793110_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23482 | 23655 |
| ALM63521.1 | KP793110_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13158 | 14036 |
| ALM63516.1 | KP793110_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6848 | 8386 |
| ALM63509.1 | KP793110_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2673 | 3809 |
| ALM63544.1 | KP793110_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22444 | 22998 |
| ALM63541.1 | KP793110_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21344 | 21856 |
| ALM63529.1 | KP793110_p24 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 18217 | 18318 |
| ALM63515.1 | KP793110_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6427 | 6792 |
| ALM63527.1 | KP793110_p22 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 17417 | 17893 |
| ALM63550.1 | KP793110_p45 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24676 | 25626 |
| ALM63559.1 | KP793110_p54 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28650 | 28817 |
| ALM63545.1 | KP793110_p40 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22995 | 23495 |
| ALM63506.1 | KP793110_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 238 | 762 |
| ALM63539.1 | KP793110_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 20509 | 20838 |
| ALM63543.1 | KP793110_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22096 | 22440 |
| ALM63510.1 | KP793110_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3790 | 4326 |
| ALM63525.1 | KP793110_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16286 | 16639 |
| ALM63524.1 | KP793110_p19 | receptor protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15455 | 16264 |
| ALM63536.1 | KP793110_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 19990 | 20109 |
| ALM63518.1 | KP793110_p13 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9352 | 9627 |
| ALM63533.1 | KP793110_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19076 | 19324 |
| ALM63556.1 | KP793110_p51 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 27910 | 28050 |
| ALM63554.1 | KP793110_p49 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 26768 | 26929 |
| ALM63535.1 | KP793110_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19816 | 19989 |
| ALM63532.1 | KP793110_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18907 | 19083 |