Genomic map of Lactococcus phage 936 group phage Phi129 (KP793112)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793112
Definition
Lactococcus phage 936 group phage Phi129, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
30178
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
35.03
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63564.1 KP793112_p5 protease phrog_80 head maturation protease head and packaging 1 3807 4343
ALM63613.1 KP793112_p54 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28832 28999
ALM63565.1 KP793112_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4336 5517
ALM63576.1 KP793112_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14071 15198
ALM63585.1 KP793112_p26 hypothetical protein phrog_1441 unknown function unknown function -1 18754 18921
ALM63566.1 KP793112_p7 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5538 5801
ALM63609.1 KP793112_p50 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27465 27956
ALM63586.1 KP793112_p27 hypothetical protein phrog_1820 unknown function unknown function -1 18921 19097
ALM63571.1 KP793112_p12 major tail protein phrog_1433 major tail protein tail 1 8426 9331
ALM63603.1 KP793112_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24189 24734
ALM63602.1 KP793112_p43 hypothetical protein phrog_1405 unknown function unknown function -1 23939 24196
ALM63562.1 KP793112_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2393 2677
ALM63592.1 KP793112_p33 hypothetical protein phrog_4546 unknown function unknown function -1 20421 20531
ALM63579.1 KP793112_p20 holin phrog_1379 unknown function unknown function 1 16379 16654
ALM63572.1 KP793112_p13 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 9369 9644
ALM63560.1 KP793112_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 278 805
ALM63577.1 KP793112_p18 strucural protein 7 phrog_1434 unknown function unknown function 1 15188 15481
ALM63561.1 KP793112_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 895 2403
ALM63581.1 KP793112_p22 hypothetical protein phrog_3874 transglycosylase other -1 17432 17908
ALM63580.1 KP793112_p21 lysin phrog_670 endolysin lysis 1 16651 17355
ALM63567.1 KP793112_p8 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 5801 6115
ALM63594.1 KP793112_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20847 21272
ALM63601.1 KP793112_p42 hypothetical protein phrog_2228 unknown function unknown function -1 23502 23882
ALM63584.1 KP793112_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18407 18754
ALM63570.1 KP793112_p11 neck passage structure phrog_2370 neck passage structure connector 1 6865 8403
ALM63574.1 KP793112_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10176 13175
ALM63600.1 KP793112_p41 hypothetical protein phrog_1632 unknown function unknown function -1 23215 23505
ALM63583.1 KP793112_p24 hypothetical protein phrog_8962 unknown function unknown function -1 18231 18332
ALM63573.1 KP793112_p14 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 9664 10176
ALM63575.1 KP793112_p16 distal tail protein phrog_1424 tail protein tail 1 13175 14071
ALM63591.1 KP793112_p32 hypothetical protein phrog_28015 unknown function unknown function -1 20226 20405
ALM63608.1 KP793112_p49 hypothetical protein phrog_2413 unknown function unknown function -1 26810 26971
ALM63589.1 KP793112_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19694 20002
ALM63578.1 KP793112_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15471 16280
ALM63587.1 KP793112_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19090 19338
ALM63610.1 KP793112_p51 middle expressed protein 1 phrog_1952 unknown function unknown function 1 28092 28232
ALM63563.1 KP793112_p4 portal protein phrog_12 portal protein head and packaging 1 2690 3826
ALM63605.1 KP793112_p46 hypothetical protein phrog_12970 unknown function unknown function -1 25753 25950
ALM63612.1 KP793112_p53 holiday junction endonuclease m3 phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28353 28835
ALM63598.1 KP793112_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22489 23007
ALM63611.1 KP793112_p52 middle expressed protein 2 phrog_1436 unknown function unknown function 1 28225 28356
ALM63588.1 KP793112_p29 hypothetical protein phrog_6037 unknown function unknown function -1 19418 19615
ALM63595.1 KP793112_p36 hypothetical protein phrog_1317 unknown function unknown function -1 21354 21866
ALM63597.1 KP793112_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22089 22448
ALM63599.1 KP793112_p40 hypothetical protein phrog_1449 unknown function unknown function -1 23004 23168
ALM63569.1 KP793112_p10 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6444 6809
ALM63590.1 KP793112_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20002 20121
ALM63582.1 KP793112_p23 hypothetical protein phrog_1430 unknown function unknown function -1 17962 18234
ALM63568.1 KP793112_p9 strucural protein phrog_1484 virion structural protein head and packaging 1 6112 6453
ALM63604.1 KP793112_p45 DNA polymerase phrog_1284 unknown function unknown function -1 24721 25671
ALM63593.1 KP793112_p34 hypothetical protein phrog_1919 unknown function unknown function -1 20521 20850
ALM63607.1 KP793112_p48 hypothetical protein phrog_5487 unknown function unknown function -1 26145 26309
ALM63596.1 KP793112_p37 hypothetical protein phrog_1295 unknown function unknown function -1 21863 22039
ALM63606.1 KP793112_p47 hypothetical protein phrog_4505 unknown function unknown function -1 25972 26130