| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793112 |
Definition |
Lactococcus phage 936 group phage Phi129, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30178 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
35.03 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63564.1 | KP793112_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3807 | 4343 |
| ALM63613.1 | KP793112_p54 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28832 | 28999 |
| ALM63565.1 | KP793112_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4336 | 5517 |
| ALM63576.1 | KP793112_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14071 | 15198 |
| ALM63585.1 | KP793112_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18754 | 18921 |
| ALM63566.1 | KP793112_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5538 | 5801 |
| ALM63609.1 | KP793112_p50 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27465 | 27956 |
| ALM63586.1 | KP793112_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18921 | 19097 |
| ALM63571.1 | KP793112_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8426 | 9331 |
| ALM63603.1 | KP793112_p44 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24189 | 24734 |
| ALM63602.1 | KP793112_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 23939 | 24196 |
| ALM63562.1 | KP793112_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2393 | 2677 |
| ALM63592.1 | KP793112_p33 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 20421 | 20531 |
| ALM63579.1 | KP793112_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16379 | 16654 |
| ALM63572.1 | KP793112_p13 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9369 | 9644 |
| ALM63560.1 | KP793112_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 278 | 805 |
| ALM63577.1 | KP793112_p18 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 15188 | 15481 |
| ALM63561.1 | KP793112_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 895 | 2403 |
| ALM63581.1 | KP793112_p22 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 17432 | 17908 |
| ALM63580.1 | KP793112_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16651 | 17355 |
| ALM63567.1 | KP793112_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5801 | 6115 |
| ALM63594.1 | KP793112_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20847 | 21272 |
| ALM63601.1 | KP793112_p42 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 23502 | 23882 |
| ALM63584.1 | KP793112_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18407 | 18754 |
| ALM63570.1 | KP793112_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6865 | 8403 |
| ALM63574.1 | KP793112_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10176 | 13175 |
| ALM63600.1 | KP793112_p41 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 23215 | 23505 |
| ALM63583.1 | KP793112_p24 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 18231 | 18332 |
| ALM63573.1 | KP793112_p14 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 9664 | 10176 |
| ALM63575.1 | KP793112_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13175 | 14071 |
| ALM63591.1 | KP793112_p32 | hypothetical protein | phrog_28015 | unknown function | unknown function | -1 | 20226 | 20405 |
| ALM63608.1 | KP793112_p49 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 26810 | 26971 |
| ALM63589.1 | KP793112_p30 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19694 | 20002 |
| ALM63578.1 | KP793112_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15471 | 16280 |
| ALM63587.1 | KP793112_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19090 | 19338 |
| ALM63610.1 | KP793112_p51 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 28092 | 28232 |
| ALM63563.1 | KP793112_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2690 | 3826 |
| ALM63605.1 | KP793112_p46 | hypothetical protein | phrog_12970 | unknown function | unknown function | -1 | 25753 | 25950 |
| ALM63612.1 | KP793112_p53 | holiday junction endonuclease m3 | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28353 | 28835 |
| ALM63598.1 | KP793112_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22489 | 23007 |
| ALM63611.1 | KP793112_p52 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 28225 | 28356 |
| ALM63588.1 | KP793112_p29 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19418 | 19615 |
| ALM63595.1 | KP793112_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21354 | 21866 |
| ALM63597.1 | KP793112_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22089 | 22448 |
| ALM63599.1 | KP793112_p40 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23004 | 23168 |
| ALM63569.1 | KP793112_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6444 | 6809 |
| ALM63590.1 | KP793112_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20002 | 20121 |
| ALM63582.1 | KP793112_p23 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17962 | 18234 |
| ALM63568.1 | KP793112_p9 | strucural protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6112 | 6453 |
| ALM63604.1 | KP793112_p45 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24721 | 25671 |
| ALM63593.1 | KP793112_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 20521 | 20850 |
| ALM63607.1 | KP793112_p48 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26145 | 26309 |
| ALM63596.1 | KP793112_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 21863 | 22039 |
| ALM63606.1 | KP793112_p47 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 25972 | 26130 |