| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793113 |
Definition |
Lactococcus phage 936 group phage PhiF.17, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30389 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
34.71 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63649.1 | KP793113_p36 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 21089 | 21985 |
| ALM63617.1 | KP793113_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2670 | 2954 |
| ALM63618.1 | KP793113_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2967 | 4103 |
| ALM63653.1 | KP793113_p40 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22756 | 23265 |
| ALM63635.1 | KP793113_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 16968 | 17708 |
| ALM63624.1 | KP793113_p11 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6711 | 7076 |
| ALM63663.1 | KP793113_p50 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 26151 | 27101 |
| ALM63636.1 | KP793113_p23 | hypothetical protein | phrog_26701 | unknown function | unknown function | -1 | 17861 | 18010 |
| ALM63668.1 | KP793113_p55 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28942 | 29424 |
| ALM63619.1 | KP793113_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4084 | 4620 |
| ALM63651.1 | KP793113_p38 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 22227 | 22337 |
| ALM63638.1 | KP793113_p25 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18493 | 18651 |
| ALM63648.1 | KP793113_p35 | hypothetical protein | phrog_29418 | unknown function | unknown function | -1 | 20778 | 20909 |
| ALM63654.1 | KP793113_p41 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23262 | 23474 |
| ALM63665.1 | KP793113_p52 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28363 | 28551 |
| ALM63640.1 | KP793113_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18995 | 19162 |
| ALM63633.1 | KP793113_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15802 | 16596 |
| ALM63625.1 | KP793113_p12 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7120 | 9102 |
| ALM63669.1 | KP793113_p56 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 29421 | 29588 |
| ALM63621.1 | KP793113_p8 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5815 | 6078 |
| ALM63615.1 | KP793113_p2 | hypothetical protein | phrog_9973 | unknown function | unknown function | 1 | 907 | 1056 |
| ALM63630.1 | KP793113_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13506 | 14402 |
| ALM63659.1 | KP793113_p46 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25019 | 25306 |
| ALM63650.1 | KP793113_p37 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21978 | 22226 |
| ALM63631.1 | KP793113_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14402 | 15529 |
| ALM63664.1 | KP793113_p51 | hypothetical protein | phrog_7549 | unknown function | unknown function | -1 | 27145 | 27390 |
| ALM63637.1 | KP793113_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18206 | 18475 |
| ALM63644.1 | KP793113_p31 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19895 | 20143 |
| ALM63667.1 | KP793113_p54 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 28814 | 28945 |
| ALM63632.1 | KP793113_p19 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 15519 | 15812 |
| ALM63642.1 | KP793113_p29 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 19340 | 19531 |
| ALM63627.1 | KP793113_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10069 | 10344 |
| ALM63623.1 | KP793113_p10 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6382 | 6720 |
| ALM63628.1 | KP793113_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10364 | 10876 |
| ALM63634.1 | KP793113_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16618 | 16971 |
| ALM63660.1 | KP793113_p47 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 25303 | 25689 |
| ALM63652.1 | KP793113_p39 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22371 | 22673 |
| ALM63626.1 | KP793113_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9125 | 10030 |
| ALM63629.1 | KP793113_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10876 | 13506 |
| ALM63616.1 | KP793113_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1058 | 2680 |
| ALM63656.1 | KP793113_p43 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23923 | 24489 |
| ALM63657.1 | KP793113_p44 | HNH endonuclease | phrog_5462 | unknown function | unknown function | -1 | 24486 | 24809 |
| ALM63643.1 | KP793113_p30 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19573 | 19824 |
| ALM63614.1 | KP793113_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 275 | 799 |
| ALM63622.1 | KP793113_p9 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6078 | 6392 |
| ALM63661.1 | KP793113_p48 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25747 | 26013 |
| ALM63646.1 | KP793113_p33 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20466 | 20585 |
| ALM63620.1 | KP793113_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4613 | 5794 |
| ALM63641.1 | KP793113_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19162 | 19338 |
| ALM63662.1 | KP793113_p49 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 25964 | 26158 |
| ALM63639.1 | KP793113_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18648 | 18995 |
| ALM63655.1 | KP793113_p42 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23559 | 23918 |
| ALM63666.1 | KP793113_p53 | middle expressed protein 1 | phrog_5027 | unknown function | unknown function | 1 | 28582 | 28809 |
| ALM63647.1 | KP793113_p34 | hypothetical protein | phrog_3002 | unknown function | unknown function | -1 | 20582 | 20767 |
| ALM63658.1 | KP793113_p45 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24796 | 25062 |
| ALM63645.1 | KP793113_p32 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20157 | 20465 |