Genomic map of Lactococcus phage 936 group phage Phi13.16 (KP793116)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793116
Definition
Lactococcus phage 936 group phage Phi13.16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
30577
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.66
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM63823.1 KP793116_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25992 26537
ALM63824.1 KP793116_p46 DNA polymerase phrog_1284 unknown function unknown function -1 26524 27474
ALM63803.1 KP793116_p25 hypothetical protein phrog_1441 unknown function unknown function -1 18521 18754
ALM63829.1 KP793116_p51 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29250 29378
ALM63811.1 KP793116_p33 hypothetical protein phrog_56 DNA methyltransferase other -1 20804 21763
ALM63787.1 KP793116_p9 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6108 6449
ALM63828.1 KP793116_p50 hypothetical protein phrog_1656 unknown function unknown function -1 28931 29119
ALM63805.1 KP793116_p27 hypothetical protein phrog_2530 unknown function unknown function -1 18869 19060
ALM63831.1 KP793116_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29511 29990
ALM63792.1 KP793116_p14 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 10410 10922
ALM63786.1 KP793116_p8 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 5797 6111
ALM63808.1 KP793116_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19653 19961
ALM63795.1 KP793116_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14328 15455
ALM63812.1 KP793116_p34 hypothetical protein phrog_1825 DNA methyltransferase other -1 21756 22007
ALM63788.1 KP793116_p10 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6440 6805
ALM63826.1 KP793116_p48 hypothetical protein phrog_5487 unknown function unknown function -1 27752 27922
ALM63817.1 KP793116_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23647 23862
ALM63818.1 KP793116_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23875 24234
ALM63825.1 KP793116_p47 hypothetical protein phrog_4505 unknown function unknown function -1 27532 27717
ALM63821.1 KP793116_p43 hypothetical protein phrog_2228 unknown function unknown function -1 25299 25685
ALM63801.1 KP793116_p23 hypothetical protein phrog_3389 unknown function unknown function -1 18001 18180
ALM63784.1 KP793116_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ALM63782.1 KP793116_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ALM63810.1 KP793116_p32 hypothetical protein phrog_1071 DNA methyltransferase other -1 20086 20748
ALM63800.1 KP793116_p22 hypothetical protein phrog_1430 unknown function unknown function -1 17738 18004
ALM63830.1 KP793116_p52 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29383 29514
ALM63798.1 KP793116_p20 holin phrog_1379 unknown function unknown function 1 16523 16864
ALM63804.1 KP793116_p26 hypothetical protein phrog_1820 unknown function unknown function -1 18691 18867
ALM63816.1 KP793116_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23141 23650
ALM63794.1 KP793116_p16 distal tail protein phrog_1424 tail protein tail 1 13432 14328
ALM63832.1 KP793116_p54 middle expressed protein 4 phrog_1652 unknown function unknown function 1 29991 30152
ALM63789.1 KP793116_p11 neck passage structure phrog_27126 neck protein connector 1 6862 9048
ALM63814.1 KP793116_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22355 22777
ALM63822.1 KP793116_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25736 25999
ALM63793.1 KP793116_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10922 13432
ALM63802.1 KP793116_p24 hypothetical protein phrog_1415 unknown function unknown function -1 18177 18524
ALM63781.1 KP793116_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ALM63813.1 KP793116_p35 hypothetical protein phrog_1919 unknown function unknown function -1 22044 22358
ALM63819.1 KP793116_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24239 24805
ALM63796.1 KP793116_p18 strucural protein 7 phrog_1434 unknown function unknown function 1 15445 15738
ALM63790.1 KP793116_p12 major tail protein phrog_1433 major tail protein tail 1 9171 10076
ALM63815.1 KP793116_p37 hypothetical protein phrog_4582 unknown function unknown function -1 22885 23058
ALM63783.1 KP793116_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ALM63799.1 KP793116_p21 lysin phrog_670 endolysin lysis 1 16861 17637
ALM63780.1 KP793116_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ALM63827.1 KP793116_p49 hypothetical protein phrog_2413 unknown function unknown function -1 28433 28561
ALM63779.1 KP793116_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ALM63806.1 KP793116_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19103 19354
ALM63820.1 KP793116_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24792 25175
ALM63785.1 KP793116_p7 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5534 5797
ALM63809.1 KP793116_p31 hypothetical protein phrog_1508 unknown function unknown function -1 19961 20080
ALM63791.1 KP793116_p13 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 10151 10390
ALM63797.1 KP793116_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15728 16489
ALM63807.1 KP793116_p29 hypothetical protein phrog_3365 unknown function unknown function -1 19425 19553