| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793116 |
Definition |
Lactococcus phage 936 group phage Phi13.16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30577 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
34.66 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63823.1 | KP793116_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25992 | 26537 |
| ALM63824.1 | KP793116_p46 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 26524 | 27474 |
| ALM63803.1 | KP793116_p25 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18521 | 18754 |
| ALM63829.1 | KP793116_p51 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 29250 | 29378 |
| ALM63811.1 | KP793116_p33 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 20804 | 21763 |
| ALM63787.1 | KP793116_p9 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6108 | 6449 |
| ALM63828.1 | KP793116_p50 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28931 | 29119 |
| ALM63805.1 | KP793116_p27 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18869 | 19060 |
| ALM63831.1 | KP793116_p53 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29511 | 29990 |
| ALM63792.1 | KP793116_p14 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10410 | 10922 |
| ALM63786.1 | KP793116_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5797 | 6111 |
| ALM63808.1 | KP793116_p30 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19653 | 19961 |
| ALM63795.1 | KP793116_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14328 | 15455 |
| ALM63812.1 | KP793116_p34 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21756 | 22007 |
| ALM63788.1 | KP793116_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6440 | 6805 |
| ALM63826.1 | KP793116_p48 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 27752 | 27922 |
| ALM63817.1 | KP793116_p39 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23647 | 23862 |
| ALM63818.1 | KP793116_p40 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23875 | 24234 |
| ALM63825.1 | KP793116_p47 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 27532 | 27717 |
| ALM63821.1 | KP793116_p43 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 25299 | 25685 |
| ALM63801.1 | KP793116_p23 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18001 | 18180 |
| ALM63784.1 | KP793116_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4332 | 5513 |
| ALM63782.1 | KP793116_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2686 | 3822 |
| ALM63810.1 | KP793116_p32 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | -1 | 20086 | 20748 |
| ALM63800.1 | KP793116_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17738 | 18004 |
| ALM63830.1 | KP793116_p52 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 29383 | 29514 |
| ALM63798.1 | KP793116_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16523 | 16864 |
| ALM63804.1 | KP793116_p26 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18691 | 18867 |
| ALM63816.1 | KP793116_p38 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23141 | 23650 |
| ALM63794.1 | KP793116_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13432 | 14328 |
| ALM63832.1 | KP793116_p54 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 29991 | 30152 |
| ALM63789.1 | KP793116_p11 | neck passage structure | phrog_27126 | neck protein | connector | 1 | 6862 | 9048 |
| ALM63814.1 | KP793116_p36 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22355 | 22777 |
| ALM63822.1 | KP793116_p44 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25736 | 25999 |
| ALM63793.1 | KP793116_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10922 | 13432 |
| ALM63802.1 | KP793116_p24 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18177 | 18524 |
| ALM63781.1 | KP793116_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2389 | 2673 |
| ALM63813.1 | KP793116_p35 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22044 | 22358 |
| ALM63819.1 | KP793116_p41 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24239 | 24805 |
| ALM63796.1 | KP793116_p18 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 15445 | 15738 |
| ALM63790.1 | KP793116_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9171 | 10076 |
| ALM63815.1 | KP793116_p37 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 22885 | 23058 |
| ALM63783.1 | KP793116_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3803 | 4339 |
| ALM63799.1 | KP793116_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16861 | 17637 |
| ALM63780.1 | KP793116_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 777 | 2399 |
| ALM63827.1 | KP793116_p49 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 28433 | 28561 |
| ALM63779.1 | KP793116_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 252 | 776 |
| ALM63806.1 | KP793116_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19103 | 19354 |
| ALM63820.1 | KP793116_p42 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24792 | 25175 |
| ALM63785.1 | KP793116_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5534 | 5797 |
| ALM63809.1 | KP793116_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 19961 | 20080 |
| ALM63791.1 | KP793116_p13 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10151 | 10390 |
| ALM63797.1 | KP793116_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15728 | 16489 |
| ALM63807.1 | KP793116_p29 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19425 | 19553 |