| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793118 |
Definition |
Lactococcus phage 936 group phage PhiF0139, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30811 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
34.66 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM63908.1 | KP793118_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14412 | 15539 |
| ALM63899.1 | KP793118_p9 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6078 | 6392 |
| ALM63893.1 | KP793118_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1058 | 2680 |
| ALM63920.1 | KP793118_p30 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19583 | 19834 |
| ALM63901.1 | KP793118_p11 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6721 | 7086 |
| ALM63913.1 | KP793118_p23 | hypothetical protein | phrog_26701 | unknown function | unknown function | -1 | 17871 | 18020 |
| ALM63897.1 | KP793118_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4613 | 5794 |
| ALM63911.1 | KP793118_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16628 | 16981 |
| ALM63934.1 | KP793118_p44 | HNH endonuclease | phrog_5462 | unknown function | unknown function | -1 | 24482 | 24805 |
| ALM63909.1 | KP793118_p19 | strucural protein 9 | phrog_1434 | unknown function | unknown function | 1 | 15529 | 15822 |
| ALM63922.1 | KP793118_p32 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20166 | 20474 |
| ALM63944.1 | KP793118_p54 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 28822 | 28953 |
| ALM63943.1 | KP793118_p53 | middle expressed protein 1 | phrog_5027 | unknown function | unknown function | 1 | 28590 | 28817 |
| ALM63933.1 | KP793118_p43 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23931 | 24485 |
| ALM63903.1 | KP793118_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9135 | 10040 |
| ALM63919.1 | KP793118_p29 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 19350 | 19541 |
| ALM63917.1 | KP793118_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19005 | 19172 |
| ALM63905.1 | KP793118_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10374 | 10886 |
| ALM63914.1 | KP793118_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18216 | 18485 |
| ALM63906.1 | KP793118_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10886 | 13516 |
| ALM63900.1 | KP793118_p10 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6389 | 6730 |
| ALM63935.1 | KP793118_p45 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24792 | 25058 |
| ALM63938.1 | KP793118_p48 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25743 | 26000 |
| ALM63930.1 | KP793118_p40 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22765 | 23274 |
| ALM63931.1 | KP793118_p41 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23271 | 23483 |
| ALM63891.1 | KP793118_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 275 | 799 |
| ALM63927.1 | KP793118_p37 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21987 | 22235 |
| ALM63940.1 | KP793118_p50 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 27001 | 27186 |
| ALM63912.1 | KP793118_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 16978 | 17718 |
| ALM63942.1 | KP793118_p52 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28371 | 28559 |
| ALM63945.1 | KP793118_p55 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28950 | 29432 |
| ALM63924.1 | KP793118_p34 | hypothetical protein | phrog_3002 | unknown function | unknown function | -1 | 20591 | 20776 |
| ALM63923.1 | KP793118_p33 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20475 | 20594 |
| ALM63896.1 | KP793118_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4084 | 4620 |
| ALM63936.1 | KP793118_p46 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25015 | 25302 |
| ALM63939.1 | KP793118_p49 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 25993 | 26943 |
| ALM63910.1 | KP793118_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15812 | 16606 |
| ALM63904.1 | KP793118_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10079 | 10354 |
| ALM63926.1 | KP793118_p36 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 21098 | 21994 |
| ALM63902.1 | KP793118_p12 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7130 | 9112 |
| ALM63932.1 | KP793118_p42 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23568 | 23927 |
| ALM63894.1 | KP793118_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2670 | 2954 |
| ALM63907.1 | KP793118_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13516 | 14412 |
| ALM63941.1 | KP793118_p51 | hypothetical protein | phrog_7915 | unknown function | unknown function | -1 | 27228 | 27920 |
| ALM63918.1 | KP793118_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19172 | 19348 |
| ALM63895.1 | KP793118_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2967 | 4103 |
| ALM63916.1 | KP793118_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18658 | 19005 |
| ALM63898.1 | KP793118_p8 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5815 | 6078 |
| ALM63892.1 | KP793118_p2 | hypothetical protein | phrog_9973 | unknown function | unknown function | 1 | 907 | 1056 |
| ALM63929.1 | KP793118_p39 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22380 | 22682 |
| ALM63947.1 | KP793118_p57 | middle expressed protein 5 | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30373 | 30756 |
| ALM63946.1 | KP793118_p56 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 29429 | 29596 |
| ALM63928.1 | KP793118_p38 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 22236 | 22346 |
| ALM63925.1 | KP793118_p35 | hypothetical protein | phrog_29418 | unknown function | unknown function | -1 | 20787 | 20918 |
| ALM63921.1 | KP793118_p31 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19905 | 20069 |
| ALM63937.1 | KP793118_p47 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 25299 | 25685 |
| ALM63915.1 | KP793118_p25 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18503 | 18661 |