Genomic map of Lactococcus phage 936 group phage Phi4.2 (KP793123)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793123
Definition
Lactococcus phage 936 group phage Phi4.2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
31375
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
34.48
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM64163.1 KP793123_p48 hypothetical protein phrog_1405 unknown function unknown function -1 25745 25996
ALM64148.1 KP793123_p33 hypothetical protein phrog_1509 unknown function unknown function -1 20495 20746
ALM64143.1 KP793123_p28 hypothetical protein phrog_3389 unknown function unknown function -1 19394 19573
ALM64127.1 KP793123_p13 major tail protein phrog_1433 major tail protein tail 1 7267 8172
ALM64166.1 KP793123_p51 DNA polymerase phrog_1284 unknown function unknown function -1 26675 27625
ALM64149.1 KP793123_p34 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20817 21311
ALM64173.1 KP793123_p58 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30229 30396
ALM64141.1 KP793123_p26 HNH endonuclease phrog_30377 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18749 18997
ALM64152.1 KP793123_p37 hypothetical protein phrog_1825 DNA methyltransferase other -1 21765 22007
ALM64128.1 KP793123_p12 major tail protein extension phrog_3791 major tail protein tail 1 7267 8854
ALM64124.1 KP793123_p9 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 6246 6560
ALM64155.1 KP793123_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22451 22873
ALM64134.1 KP793123_p19 hypothetical protein phrog_1434 unknown function unknown function 1 14707 14982
ALM64137.1 KP793123_p22 holin phrog_1379 unknown function unknown function 1 16942 17283
ALM64161.1 KP793123_p46 hypothetical protein phrog_1449 unknown function unknown function -1 25175 25348
ALM64165.1 KP793123_p50 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26143 26538
ALM64154.1 KP793123_p39 hypothetical protein phrog_1919 unknown function unknown function -1 22152 22454
ALM64132.1 KP793123_p17 distal tail protein phrog_1424 tail protein tail 1 12672 13604
ALM64121.1 KP793123_p6 protease phrog_80 head maturation protease head and packaging 1 4252 4788
ALM64174.1 KP793123_p59 middle expressed protein 5 phrog_6252 unknown function unknown function 1 30993 31121
ALM64153.1 KP793123_p38 hypothetical protein phrog_4546 unknown function unknown function -1 22008 22118
ALM64144.1 KP793123_p29 hypothetical protein phrog_1415 unknown function unknown function -1 19570 19917
ALM64120.1 KP793123_p5 portal protein phrog_12 portal protein head and packaging 1 3135 4271
ALM64157.1 KP793123_p42 hypothetical protein phrog_1295 unknown function unknown function -1 23462 23677
ALM64133.1 KP793123_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 13606 14706
ALM64172.1 KP793123_p57 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29750 30232
ALM64139.1 KP793123_p24 hypothetical protein phrog_3874 transglycosylase other -1 18080 18589
ALM64125.1 KP793123_p10 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6557 6898
ALM64160.1 KP793123_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24676 25188
ALM64170.1 KP793123_p55 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29489 29617
ALM64168.1 KP793123_p53 hypothetical protein phrog_7915 unknown function unknown function -1 28021 28719
ALM64119.1 KP793123_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2838 3122
ALM64116.1 KP793123_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 242 766
ALM64118.1 KP793123_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1226 2848
ALM64164.1 KP793123_p49 hypothetical protein phrog_3604 unknown function unknown function -1 25968 26150
ALM64147.1 KP793123_p32 hypothetical protein phrog_2530 unknown function unknown function -1 20262 20453
ALM64126.1 KP793123_p11 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6889 7254
ALM64129.1 KP793123_p14 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 8875 9150
ALM64158.1 KP793123_p43 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23690 24049
ALM64123.1 KP793123_p8 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5983 6246
ALM64169.1 KP793123_p54 hypothetical protein phrog_1656 unknown function unknown function -1 29170 29358
ALM64130.1 KP793123_p15 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 9170 9682
ALM64145.1 KP793123_p30 hypothetical protein phrog_1441 unknown function unknown function -1 19917 20084
ALM64150.1 KP793123_p35 hypothetical protein phrog_1225 unknown function unknown function -1 21283 21588
ALM64142.1 KP793123_p27 hypothetical protein phrog_1430 unknown function unknown function -1 19128 19397
ALM64171.1 KP793123_p56 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29622 29753
ALM64146.1 KP793123_p31 hypothetical protein phrog_1820 unknown function unknown function -1 20084 20260
ALM64122.1 KP793123_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4781 5962
ALM64136.1 KP793123_p21 receptor binding protein 2 phrog_1630 receptor binding tail protein tail 1 16114 16908
ALM64117.1 KP793123_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 763 1224
ALM64156.1 KP793123_p41 hypothetical protein phrog_1317 unknown function unknown function -1 22953 23465
ALM64131.1 KP793123_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 9682 12672
ALM64167.1 KP793123_p52 hypothetical protein phrog_2541 unknown function unknown function -1 27618 27839
ALM64135.1 KP793123_p20 receptor binding protein 1 phrog_22544 unknown function unknown function 1 14984 16114
ALM64159.1 KP793123_p44 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24054 24689
ALM64162.1 KP793123_p47 hypothetical protein phrog_1632 unknown function unknown function -1 25395 25685
ALM64151.1 KP793123_p36 hypothetical protein phrog_1508 unknown function unknown function -1 21588 21707
ALM64140.1 KP793123_p25 HNH endonuclease phrog_35117 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 18643 18804
ALM64138.1 KP793123_p23 lysin phrog_670 endolysin lysis 1 17280 17987