| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793124 |
Definition |
Lactococcus phage 936 group phage Phi44, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31379 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
34.62 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64184.1 | KP793124_p10 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6547 | 6888 |
| ALM64221.1 | KP793124_p47 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 29234 | 29362 |
| ALM64220.1 | KP793124_p46 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 27557 | 28507 |
| ALM64223.1 | KP793124_p49 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 30051 | 30179 |
| ALM64225.1 | KP793124_p51 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30312 | 30791 |
| ALM64196.1 | KP793124_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17752 | 18528 |
| ALM64177.1 | KP793124_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1225 | 2838 |
| ALM64187.1 | KP793124_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 10062 | 10967 |
| ALM64214.1 | KP793124_p40 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 25209 | 25424 |
| ALM64183.1 | KP793124_p9 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6236 | 6550 |
| ALM64206.1 | KP793124_p32 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21753 | 22061 |
| ALM64219.1 | KP793124_p45 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 27301 | 27564 |
| ALM64189.1 | KP793124_p15 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 11301 | 11813 |
| ALM64200.1 | KP793124_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 20182 | 20529 |
| ALM64207.1 | KP793124_p33 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22061 | 22180 |
| ALM64198.1 | KP793124_p24 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 19103 | 19630 |
| ALM64217.1 | KP793124_p43 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 26357 | 26764 |
| ALM64182.1 | KP793124_p8 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5973 | 6236 |
| ALM64210.1 | KP793124_p36 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23917 | 24339 |
| ALM64218.1 | KP793124_p44 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26864 | 27250 |
| ALM64204.1 | KP793124_p30 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 21164 | 21409 |
| ALM64213.1 | KP793124_p39 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 24703 | 25212 |
| ALM64205.1 | KP793124_p31 | hypothetical protein | phrog_20985 | unknown function | unknown function | -1 | 21406 | 21672 |
| ALM64203.1 | KP793124_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20865 | 21101 |
| ALM64209.1 | KP793124_p35 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 22904 | 23806 |
| ALM64194.1 | KP793124_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16619 | 17380 |
| ALM64181.1 | KP793124_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4750 | 5952 |
| ALM64193.1 | KP793124_p19 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 16336 | 16629 |
| ALM64215.1 | KP793124_p41 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25440 | 25799 |
| ALM64188.1 | KP793124_p14 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 11006 | 11281 |
| ALM64176.1 | KP793124_p2 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 753 | 1214 |
| ALM64175.1 | KP793124_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 232 | 756 |
| ALM64195.1 | KP793124_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17402 | 17755 |
| ALM64216.1 | KP793124_p42 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25804 | 26370 |
| ALM64180.1 | KP793124_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4242 | 4778 |
| ALM64211.1 | KP793124_p37 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 24340 | 24450 |
| ALM64226.1 | KP793124_p52 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 30792 | 30953 |
| ALM64178.1 | KP793124_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2828 | 3112 |
| ALM64224.1 | KP793124_p50 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 30184 | 30315 |
| ALM64199.1 | KP793124_p25 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19740 | 20009 |
| ALM64202.1 | KP793124_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 20696 | 20872 |
| ALM64208.1 | KP793124_p34 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | -1 | 22186 | 22848 |
| ALM64190.1 | KP793124_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11813 | 14323 |
| ALM64212.1 | KP793124_p38 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 24447 | 24620 |
| ALM64197.1 | KP793124_p23 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 18655 | 19074 |
| ALM64222.1 | KP793124_p48 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29732 | 29920 |
| ALM64179.1 | KP793124_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3125 | 4261 |
| ALM64192.1 | KP793124_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 15219 | 16346 |
| ALM64191.1 | KP793124_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14323 | 15219 |
| ALM64201.1 | KP793124_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 20529 | 20696 |
| ALM64185.1 | KP793124_p11 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6879 | 7244 |
| ALM64186.1 | KP793124_p12 | neck passage structure | phrog_7918 | neck passage structure protein | connector | 1 | 7301 | 9847 |