| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793126 |
Definition |
Lactococcus phage 936 group phage PhiM.5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31498 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
34.82 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64341.1 | KP793126_p57 | middle expressed protein 3 | phrog_1652 | unknown function | unknown function | 1 | 30529 | 30696 |
| ALM64335.1 | KP793126_p51 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27911 | 28138 |
| ALM64291.1 | KP793126_p7 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 5067 | 5603 |
| ALM64329.1 | KP793126_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25076 | 25576 |
| ALM64308.1 | KP793126_p24 | hypothetical protein | phrog_3775 | transglycosylase | other | -1 | 18235 | 18399 |
| ALM64338.1 | KP793126_p54 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 29628 | 29756 |
| ALM64300.1 | KP793126_p16 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 9917 | 10429 |
| ALM64317.1 | KP793126_p33 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20364 | 20621 |
| ALM64292.1 | KP793126_p8 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 5596 | 6777 |
| ALM64342.1 | KP793126_p58 | middle expressed protein 4 | phrog_6252 | unknown function | unknown function | 1 | 31304 | 31435 |
| ALM64322.1 | KP793126_p38 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 22647 | 22892 |
| ALM64323.1 | KP793126_p39 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 22893 | 23003 |
| ALM64324.1 | KP793126_p40 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 23039 | 23341 |
| ALM64296.1 | KP793126_p12 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 7694 | 8059 |
| ALM64304.1 | KP793126_p20 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 16020 | 16313 |
| ALM64294.1 | KP793126_p10 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 7061 | 7375 |
| ALM64301.1 | KP793126_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10429 | 13428 |
| ALM64321.1 | KP793126_p37 | DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 21713 | 22654 |
| ALM64318.1 | KP793126_p34 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 20797 | 21228 |
| ALM64297.1 | KP793126_p14 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8072 | 8977 |
| ALM64334.1 | KP793126_p50 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 26867 | 27817 |
| ALM64305.1 | KP793126_p21 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16303 | 17109 |
| ALM64312.1 | KP793126_p28 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 19262 | 19435 |
| ALM64290.1 | KP793126_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3950 | 5086 |
| ALM64328.1 | KP793126_p44 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24525 | 25079 |
| ALM64327.1 | KP793126_p43 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24162 | 24521 |
| ALM64285.1 | KP793126_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 261 | 785 |
| ALM64339.1 | KP793126_p55 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 29761 | 29892 |
| ALM64330.1 | KP793126_p46 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25667 | 25840 |
| ALM64331.1 | KP793126_p47 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25887 | 26177 |
| ALM64316.1 | KP793126_p32 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 20130 | 20321 |
| ALM64315.1 | KP793126_p31 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19952 | 20137 |
| ALM64320.1 | KP793126_p36 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 21536 | 21655 |
| ALM64336.1 | KP793126_p52 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 28180 | 28344 |
| ALM64299.1 | KP793126_p15 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9622 | 9897 |
| ALM64309.1 | KP793126_p25 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 18441 | 18698 |
| ALM64302.1 | KP793126_p18 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13428 | 14903 |
| ALM64307.1 | KP793126_p23 | lysin | phrog_670 | endolysin | lysis | 1 | 17473 | 18189 |
| ALM64298.1 | KP793126_p13 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8072 | 9602 |
| ALM64288.1 | KP793126_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2041 | 3663 |
| ALM64326.1 | KP793126_p42 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23934 | 24149 |
| ALM64337.1 | KP793126_p53 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29309 | 29497 |
| ALM64289.1 | KP793126_p5 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3653 | 3937 |
| ALM64325.1 | KP793126_p41 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23428 | 23937 |
| ALM64303.1 | KP793126_p19 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14903 | 16030 |
| ALM64287.1 | KP793126_p3 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 1607 | 2029 |
| ALM64311.1 | KP793126_p27 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18996 | 19265 |
| ALM64319.1 | KP793126_p35 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21230 | 21535 |
| ALM64286.1 | KP793126_p2 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 782 | 1597 |
| ALM64293.1 | KP793126_p9 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 6798 | 7061 |
| ALM64306.1 | KP793126_p22 | holin | phrog_1379 | unknown function | unknown function | 1 | 17123 | 17476 |
| ALM64310.1 | KP793126_p26 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 18727 | 18975 |
| ALM64332.1 | KP793126_p48 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26174 | 26560 |
| ALM64295.1 | KP793126_p11 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 7365 | 7703 |
| ALM64333.1 | KP793126_p49 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 26617 | 26874 |
| ALM64313.1 | KP793126_p29 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19438 | 19785 |
| ALM64314.1 | KP793126_p30 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19785 | 19952 |
| ALM64340.1 | KP793126_p56 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29889 | 30371 |